RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 POTEJP0CG39 1038 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 SRGNP10124 158 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 PHACTR3Q96KR7 559 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 TAOK3Q9H2K8 898 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 USP16Q9Y5T5 823 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 LTBP3Q9NS15 1303 aa19.72■□□□□ 0.75
SEC61A1-207ENST00000498837 BTBD11A6QL63 1104 aa19.71■□□□□ 0.75
SEC61A1-207ENST00000498837 STYK1Q6J9G0 422 aa19.71■□□□□ 0.75
SEC61A1-207ENST00000498837 PRPF40BQ6NWY9 871 aaKnown RBP19.71■□□□□ 0.75
SEC61A1-207ENST00000498837 NPM2Q86SE8 214 aaKnown RBP19.71■□□□□ 0.75
SEC61A1-207ENST00000498837 DZIP3Q86Y13 1208 aaKnown RBP19.71■□□□□ 0.75
SEC61A1-207ENST00000498837 CNKSR1Q969H4 720 aa19.71■□□□□ 0.75
SEC61A1-207ENST00000498837 PRAMEF22A3QJZ6 481 aa19.7■□□□□ 0.74
SEC61A1-207ENST00000498837 ST5P78524 1137 aa19.7■□□□□ 0.74
SEC61A1-207ENST00000498837 NPC1L1Q9UHC9 1359 aa19.7■□□□□ 0.74
SEC61A1-207ENST00000498837 CHADLQ6NUI6 762 aa19.69■□□□□ 0.74
SEC61A1-207ENST00000498837 MASTLQ96GX5 879 aa19.69■□□□□ 0.74
SEC61A1-207ENST00000498837 PRKAR2BP31323 418 aa19.68■□□□□ 0.74
SEC61A1-207ENST00000498837 RSPH6AQ9H0K4 717 aa19.67■□□□□ 0.74
SEC61A1-207ENST00000498837 MKRN1Q9UHC7 482 aaKnown RBP19.67■□□□□ 0.74
SEC61A1-207ENST00000498837 SOGA3Q5TF21 947 aa19.66■□□□□ 0.74
SEC61A1-207ENST00000498837 NBPF5PQ86XG9 351 aaPredicted RBP19.66■□□□□ 0.74
SEC61A1-207ENST00000498837 C7orf43Q8WVR3 580 aa19.66■□□□□ 0.74
SEC61A1-207ENST00000498837 CREBZFQ9NS37 354 aa19.66■□□□□ 0.74
SEC61A1-207ENST00000498837 NUP98P52948 1817 aa19.66■□□□□ 0.74
SEC61A1-207ENST00000498837 DLG5Q8TDM6 1919 aa19.65■□□□□ 0.74
SEC61A1-207ENST00000498837 CLEC4GQ6UXB4 293 aa19.65■□□□□ 0.74
SEC61A1-207ENST00000498837 MCM10Q7L590 875 aa19.64■□□□□ 0.73
SEC61A1-207ENST00000498837 SNRPA1P09661 255 aaKnown RBP19.63■□□□□ 0.73
SEC61A1-207ENST00000498837 OLFM4Q6UX06 510 aa19.63■□□□□ 0.73
SEC61A1-207ENST00000498837 NBPF26B4DH59 902 aa19.62■□□□□ 0.73
SEC61A1-207ENST00000498837 NPR1P16066 1061 aa19.62■□□□□ 0.73
SEC61A1-207ENST00000498837 CCDC93Q567U6 631 aa19.62■□□□□ 0.73
SEC61A1-207ENST00000498837 NBPF10Q6P3W6 841 aaKnown RBP19.62■□□□□ 0.73
SEC61A1-207ENST00000498837 NBPF15Q8N660 670 aa19.62■□□□□ 0.73
SEC61A1-207ENST00000498837 L3MBTL3Q96JM7 780 aaPredicted RBP19.62■□□□□ 0.73
SEC61A1-207ENST00000498837 TAF1DQ9H5J8 278 aaPredicted RBP19.62■□□□□ 0.73
SEC61A1-207ENST00000498837 PASKQ96RG2 1323 aa19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 KLRG2A4D1S0 409 aaPredicted RBP19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 FAM177BA6PVY3 158 aa19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 DCTN1Q14203 1278 aa19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 CFAP53Q96M91 514 aa19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 ZNF277Q9NRM2 450 aaPredicted RBP19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 NIP7Q9Y221 180 aaKnown RBP eCLIP19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 ZNF652Q9Y2D9 606 aa19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 LAMB4A4D0S4 1761 aa19.61■□□□□ 0.73
SEC61A1-207ENST00000498837 ADAMTSL1Q8N6G6 1762 aa19.6■□□□□ 0.73
SEC61A1-207ENST00000498837 ZNF541Q9H0D2 1346 aa19.6■□□□□ 0.73
SEC61A1-207ENST00000498837 IQCA1LA6NCM1 817 aa19.6■□□□□ 0.73
SEC61A1-207ENST00000498837 FKBP4Q02790 459 aaKnown RBP eCLIP19.6■□□□□ 0.73
SEC61A1-207ENST00000498837 TPTE2Q6XPS3 522 aa19.6■□□□□ 0.73
SEC61A1-207ENST00000498837 LDHDQ86WU2 507 aa19.6■□□□□ 0.73
SEC61A1-207ENST00000498837 RTF1Q92541 710 aaKnown RBP19.6■□□□□ 0.73
SEC61A1-207ENST00000498837 CNTNAP1P78357 1384 aa19.59■□□□□ 0.73
SEC61A1-207ENST00000498837 U2AF1L5P0DN76 240 aaPredicted RBP19.59■□□□□ 0.73
SEC61A1-207ENST00000498837 U2AF1Q01081 240 aaKnown RBP eCLIP19.59■□□□□ 0.73
SEC61A1-207ENST00000498837 FOXN1O15353 648 aa19.58■□□□□ 0.72
SEC61A1-207ENST00000498837 ITGBL1O95965 494 aaPredicted RBP19.58■□□□□ 0.72
SEC61A1-207ENST00000498837 HLFQ16534 295 aa19.58■□□□□ 0.72
SEC61A1-207ENST00000498837 EAPPQ56P03 285 aaPredicted RBP19.58■□□□□ 0.72
SEC61A1-207ENST00000498837 NUDCQ9Y266 331 aa19.58■□□□□ 0.72
SEC61A1-207ENST00000498837 KDM3BQ7LBC6 1761 aa19.57■□□□□ 0.72
SEC61A1-207ENST00000498837 RTKN2Q8IZC4 609 aa19.56■□□□□ 0.72
SEC61A1-207ENST00000498837 MIS18AQ9NYP9 233 aa19.56■□□□□ 0.72
SEC61A1-207ENST00000498837 CLEC11AQ9Y240 323 aa19.56■□□□□ 0.72
SEC61A1-207ENST00000498837 TMEM88BA6NKF7 163 aa19.55■□□□□ 0.72
SEC61A1-207ENST00000498837 PPP2R1AP30153 589 aa19.55■□□□□ 0.72
SEC61A1-207ENST00000498837 VEGFBP49765 207 aa19.55■□□□□ 0.72
SEC61A1-207ENST00000498837 SYNE4Q8N205 404 aa19.55■□□□□ 0.72
SEC61A1-207ENST00000498837 HACL1Q9UJ83 578 aa19.55■□□□□ 0.72
SEC61A1-207ENST00000498837 RGL2O15211 777 aa19.54■□□□□ 0.72
SEC61A1-207ENST00000498837 ALDH1B1P30837 517 aa19.54■□□□□ 0.72
SEC61A1-207ENST00000498837 EPHX2P34913 555 aa19.54■□□□□ 0.72
SEC61A1-207ENST00000498837 IARSP41252 1262 aaKnown RBP19.54■□□□□ 0.72
SEC61A1-207ENST00000498837 TAF7Q15545 349 aaPredicted RBP19.54■□□□□ 0.72
SEC61A1-207ENST00000498837 RNF123Q5XPI4 1314 aa19.53■□□□□ 0.72
SEC61A1-207ENST00000498837 FZD9O00144 591 aa19.53■□□□□ 0.72
SEC61A1-207ENST00000498837 HTATSF1O43719 755 aaKnown RBP19.53■□□□□ 0.72
SEC61A1-207ENST00000498837 GTF2E1P29083 439 aaPredicted RBP19.53■□□□□ 0.72
SEC61A1-207ENST00000498837 NGEFQ8N5V2 710 aa19.53■□□□□ 0.72
SEC61A1-207ENST00000498837 COL4A5P29400 1685 aa19.52■□□□□ 0.72
SEC61A1-207ENST00000498837 SNED1Q8TER0 1413 aa19.52■□□□□ 0.72
SEC61A1-207ENST00000498837 TRPM7Q96QT4 1865 aa19.52■□□□□ 0.72
SEC61A1-207ENST00000498837 LTBP1Q14766 1721 aa19.52■□□□□ 0.72
SEC61A1-207ENST00000498837 NUTM1Q86Y26 1132 aa19.52■□□□□ 0.72
SEC61A1-207ENST00000498837 MAP1SQ66K74 1059 aaPredicted RBP19.51■□□□□ 0.71
SEC61A1-207ENST00000498837 ABCC12Q96J65 1359 aa19.51■□□□□ 0.71
SEC61A1-207ENST00000498837 CNTROBQ8N137 903 aa19.5■□□□□ 0.71
SEC61A1-207ENST00000498837 PRDM10Q9NQV6 1147 aa19.5■□□□□ 0.71
SEC61A1-207ENST00000498837 CRY2Q49AN0 593 aa19.49■□□□□ 0.71
SEC61A1-207ENST00000498837 PNMA8AQ86V59 439 aaPredicted RBP19.49■□□□□ 0.71
SEC61A1-207ENST00000498837 GPC2Q8N158 579 aa19.49■□□□□ 0.71
SEC61A1-207ENST00000498837 PSMD1Q99460 953 aa19.49■□□□□ 0.71
SEC61A1-207ENST00000498837 RRP7AQ9Y3A4 280 aaKnown RBP19.49■□□□□ 0.71
SEC61A1-207ENST00000498837 CTCFP49711 727 aaPredicted RBP19.48■□□□□ 0.71
SEC61A1-207ENST00000498837 TTLL7Q6ZT98 887 aa19.48■□□□□ 0.71
SEC61A1-207ENST00000498837 SLC51AQ86UW1 340 aa19.48■□□□□ 0.71
SEC61A1-207ENST00000498837 JDP2Q8WYK2 163 aa19.48■□□□□ 0.71
SEC61A1-207ENST00000498837 AIDAQ96BJ3 306 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms