RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 TM4SF1P30408 202 aa20.06■□□□□ 0.8
CPNE1-228ENST00000498814 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
CPNE1-228ENST00000498814 TTLL7Q6ZT98 887 aa20.06■□□□□ 0.8
CPNE1-228ENST00000498814 HYPKQ9NX55 129 aa20.06■□□□□ 0.8
CPNE1-228ENST00000498814 PPP1R1BQ9UD71 204 aaPredicted RBP20.06■□□□□ 0.8
CPNE1-228ENST00000498814 ERVV-1B6SEH8 477 aa20.05■□□□□ 0.8
CPNE1-228ENST00000498814 KIF6Q6ZMV9 814 aa20.05■□□□□ 0.8
CPNE1-228ENST00000498814 MAP3K15Q6ZN16 1313 aa20.04■□□□□ 0.8
CPNE1-228ENST00000498814 COPS6Q7L5N1 327 aa20.04■□□□□ 0.8
CPNE1-228ENST00000498814 ZNF652Q9Y2D9 606 aa20.04■□□□□ 0.8
CPNE1-228ENST00000498814 ZBED9Q6R2W3 1325 aa20.03■□□□□ 0.8
CPNE1-228ENST00000498814 NFIXQ14938 502 aa20.03■□□□□ 0.8
CPNE1-228ENST00000498814 XAGE3Q8WTP9 111 aa20.03■□□□□ 0.8
CPNE1-228ENST00000498814 AFDNP55196 1824 aaKnown RBP20.02■□□□□ 0.8
CPNE1-228ENST00000498814 STK31Q9BXU1 1019 aa20.02■□□□□ 0.8
CPNE1-228ENST00000498814 PARP3Q9Y6F1 533 aa20.02■□□□□ 0.8
CPNE1-228ENST00000498814 DDR1Q08345 913 aa20.01■□□□□ 0.79
CPNE1-228ENST00000498814 AIMP1Q12904 312 aaKnown RBP20.01■□□□□ 0.79
CPNE1-228ENST00000498814 HLFQ16534 295 aa20.01■□□□□ 0.79
CPNE1-228ENST00000498814 TBC1D9BQ66K14 1250 aa20.01■□□□□ 0.79
CPNE1-228ENST00000498814 NRXN2Q9P2S2 1712 aa20.01■□□□□ 0.79
CPNE1-228ENST00000498814 POLRMTO00411 1230 aaKnown RBP20■□□□□ 0.79
CPNE1-228ENST00000498814 ZBTB3Q9H5J0 574 aa20■□□□□ 0.79
CPNE1-228ENST00000498814 KIF13BQ9NQT8 1826 aa19.99■□□□□ 0.79
CPNE1-228ENST00000498814 ANKRD36CQ5JPF3 1778 aa19.99■□□□□ 0.79
CPNE1-228ENST00000498814 GIGYF2Q6Y7W6 1299 aaKnown RBP19.99■□□□□ 0.79
CPNE1-228ENST00000498814 BICDL1Q6ZP65 573 aa19.99■□□□□ 0.79
CPNE1-228ENST00000498814 SETDB2Q96T68 719 aa19.99■□□□□ 0.79
CPNE1-228ENST00000498814 PHAXQ9H814 394 aaKnown RBP19.99■□□□□ 0.79
CPNE1-228ENST00000498814 TCERG1O14776 1098 aaKnown RBP19.98■□□□□ 0.79
CPNE1-228ENST00000498814 SLC4A2P04920 1241 aa19.98■□□□□ 0.79
CPNE1-228ENST00000498814 ANKRD13DQ6ZTN6 518 aa19.98■□□□□ 0.79
CPNE1-228ENST00000498814 PLBD2Q8NHP8 589 aa19.98■□□□□ 0.79
CPNE1-228ENST00000498814 FHDC1Q9C0D6 1143 aaPredicted RBP19.98■□□□□ 0.79
CPNE1-228ENST00000498814 ATP10DQ9P241 1426 aa19.98■□□□□ 0.79
CPNE1-228ENST00000498814 ARFGEF2Q9Y6D5 1785 aa19.98■□□□□ 0.79
CPNE1-228ENST00000498814 CARMIL3Q8ND23 1372 aa19.97■□□□□ 0.79
CPNE1-228ENST00000498814 SERPINB2P05120 415 aa19.97■□□□□ 0.79
CPNE1-228ENST00000498814 CT47B1P0C2W7 299 aaPredicted RBP19.97■□□□□ 0.79
CPNE1-228ENST00000498814 ZNF428Q96B54 188 aa19.97■□□□□ 0.79
CPNE1-228ENST00000498814 CD2APQ9Y5K6 639 aa19.97■□□□□ 0.79
CPNE1-228ENST00000498814 SYT17Q9BSW7 474 aa19.96■□□□□ 0.79
CPNE1-228ENST00000498814 NIP7Q9Y221 180 aaKnown RBP eCLIP19.96■□□□□ 0.79
CPNE1-228ENST00000498814 HSP90AB3PQ58FF7 597 aa19.95■□□□□ 0.78
CPNE1-228ENST00000498814 ZNF34Q8IZ26 560 aa19.95■□□□□ 0.78
CPNE1-228ENST00000498814 C10orf71Q711Q0 1435 aa19.94■□□□□ 0.78
CPNE1-228ENST00000498814 DDX58O95786 925 aaKnown RBP19.94■□□□□ 0.78
CPNE1-228ENST00000498814 G2E3Q7L622 706 aa19.94■□□□□ 0.78
CPNE1-228ENST00000498814 TCIRG1Q13488 830 aa19.93■□□□□ 0.78
CPNE1-228ENST00000498814 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
CPNE1-228ENST00000498814 FLIIQ13045 1269 aa19.92■□□□□ 0.78
CPNE1-228ENST00000498814 RIC3Q7Z5B4 369 aa19.92■□□□□ 0.78
CPNE1-228ENST00000498814 GPTP24298 496 aa19.91■□□□□ 0.78
CPNE1-228ENST00000498814 ALDH1L2Q3SY69 923 aa19.91■□□□□ 0.78
CPNE1-228ENST00000498814 PARP10Q53GL7 1025 aa19.91■□□□□ 0.78
CPNE1-228ENST00000498814 PRR5LQ6MZQ0 368 aa19.91■□□□□ 0.78
CPNE1-228ENST00000498814 KSR2Q6VAB6 950 aa19.91■□□□□ 0.78
CPNE1-228ENST00000498814 NBPF5PQ86XG9 351 aaPredicted RBP19.91■□□□□ 0.78
CPNE1-228ENST00000498814 UBN2Q6ZU65 1347 aa19.91■□□□□ 0.78
CPNE1-228ENST00000498814 KIAA1551Q9HCM1 1747 aa19.9■□□□□ 0.78
CPNE1-228ENST00000498814 ANKRD31Q8N7Z5 1873 aa19.9■□□□□ 0.78
CPNE1-228ENST00000498814 TPTE2Q6XPS3 522 aa19.9■□□□□ 0.78
CPNE1-228ENST00000498814 CNBD1Q8NA66 436 aa19.9■□□□□ 0.78
CPNE1-228ENST00000498814 SSH1Q8WYL5 1049 aa19.9■□□□□ 0.78
CPNE1-228ENST00000498814 IBTKQ9P2D0 1353 aaPredicted RBP19.9■□□□□ 0.78
CPNE1-228ENST00000498814 PI4KAP2A4QPH2 592 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 ADCY9O60503 1353 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 TGFB2P61812 414 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 TRIM28Q13263 835 aaKnown RBP19.89■□□□□ 0.77
CPNE1-228ENST00000498814 SUSD4Q5VX71 490 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 MRPL50Q8N5N7 158 aaKnown RBP19.89■□□□□ 0.77
CPNE1-228ENST00000498814 PI4KAP1Q8N8J0 262 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 NLGN2Q8NFZ4 835 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 ISCA1Q9BUE6 129 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 NYXQ9GZU5 481 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 MAP3K2Q9Y2U5 619 aa19.89■□□□□ 0.77
CPNE1-228ENST00000498814 N4BP2Q86UW6 1770 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-228ENST00000498814 FKBP5Q13451 457 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-228ENST00000498814 PPP1R42Q7Z4L9 355 aa19.88■□□□□ 0.77
CPNE1-228ENST00000498814 NLRP10Q86W26 655 aa19.88■□□□□ 0.77
CPNE1-228ENST00000498814 METTL22Q9BUU2 404 aaPredicted RBP19.88■□□□□ 0.77
CPNE1-228ENST00000498814 FAM177BA6PVY3 158 aa19.87■□□□□ 0.77
CPNE1-228ENST00000498814 NPHP1O15259 732 aa19.87■□□□□ 0.77
CPNE1-228ENST00000498814 ST5P78524 1137 aa19.87■□□□□ 0.77
CPNE1-228ENST00000498814 BRIP1Q9BX63 1249 aa19.87■□□□□ 0.77
CPNE1-228ENST00000498814 PXDNLA1KZ92 1463 aa19.86■□□□□ 0.77
CPNE1-228ENST00000498814 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
CPNE1-228ENST00000498814 ATP5J2-PTCD1G3V325 749 aa19.86■□□□□ 0.77
CPNE1-228ENST00000498814 NTSR2O95665 410 aa19.86■□□□□ 0.77
CPNE1-228ENST00000498814 RARSP54136 660 aaKnown RBP19.85■□□□□ 0.77
CPNE1-228ENST00000498814 BRPF1P55201 1214 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-228ENST00000498814 CCDC24Q8N4L8 307 aa19.85■□□□□ 0.77
CPNE1-228ENST00000498814 MYD88Q99836 296 aa19.85■□□□□ 0.77
CPNE1-228ENST00000498814 UTP14AQ9BVJ6 771 aaKnown RBP19.85■□□□□ 0.77
CPNE1-228ENST00000498814 SMC4Q9NTJ3 1288 aa19.85■□□□□ 0.77
CPNE1-228ENST00000498814 BRCA1P38398 1863 aaKnown RBP19.85■□□□□ 0.77
CPNE1-228ENST00000498814 DLEC1Q9Y238 1755 aa19.85■□□□□ 0.77
CPNE1-228ENST00000498814 GTF2E1P29083 439 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-228ENST00000498814 PDE6BP35913 854 aa19.84■□□□□ 0.77
CPNE1-228ENST00000498814 NEXNQ0ZGT2 675 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms