RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	ZNF511	Q8NB15	262 aa		10.49	□□□□□ -0.73
GARNL3-222	ENST00000498801	NFATC2IP	Q8NCF5	419 aa		10.49	□□□□□ -0.73
GARNL3-222	ENST00000498801	CARD14	Q9BXL6	1004 aa		10.49	□□□□□ -0.73
GARNL3-222	ENST00000498801	MAGEB6P1	A0A0J9YX57	407 aa		10.48	□□□□□ -0.73
GARNL3-222	ENST00000498801	FAM174A	Q8TBP5	190 aa		10.48	□□□□□ -0.73
GARNL3-222	ENST00000498801	CEP126	Q9P2H0	1117 aa		10.48	□□□□□ -0.73
GARNL3-222	ENST00000498801	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.47	□□□□□ -0.73
GARNL3-222	ENST00000498801	RNF223	E7ERA6	249 aa		10.47	□□□□□ -0.73
GARNL3-222	ENST00000498801	BPHL	Q86WA6	291 aa	Predicted RBP	10.47	□□□□□ -0.73
GARNL3-222	ENST00000498801	FOXJ1	Q92949	421 aa		10.47	□□□□□ -0.73
GARNL3-222	ENST00000498801	PLEKHH1	Q9ULM0	1364 aa		10.47	□□□□□ -0.73
GARNL3-222	ENST00000498801	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.47	□□□□□ -0.73
GARNL3-222	ENST00000498801	UBAP1L	F5GYI3	381 aa		10.46	□□□□□ -0.73
GARNL3-222	ENST00000498801	SKI	P12755	728 aa		10.46	□□□□□ -0.73
GARNL3-222	ENST00000498801	AGER	Q15109	404 aa		10.46	□□□□□ -0.73
GARNL3-222	ENST00000498801	NBPF8	Q3BBV2	869 aa		10.46	□□□□□ -0.73
GARNL3-222	ENST00000498801	C4orf48	Q5BLP8	95 aa		10.46	□□□□□ -0.73
GARNL3-222	ENST00000498801	TMEM132E	Q6IEE7	984 aa		10.46	□□□□□ -0.73
GARNL3-222	ENST00000498801	TRAIP	Q9BWF2	469 aa		10.46	□□□□□ -0.73
GARNL3-222	ENST00000498801	SBNO2	Q9Y2G9	1366 aa		10.46	□□□□□ -0.74
GARNL3-222	ENST00000498801	AHDC1	Q5TGY3	1603 aa	Predicted RBP	10.46	□□□□□ -0.74
GARNL3-222	ENST00000498801	ANKAR	Q7Z5J8	1434 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	USP17L3	A6NCW0	530 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	USP17L4	A6NCW7	530 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	USP17L5	A8MUK1	530 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	GGCX	P38435	758 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	SLFNL1	Q499Z3	407 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	ERFE	Q4G0M1	354 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	USP17L2	Q6R6M4	530 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	USP17L1	Q7RTZ2	530 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	DZIP3	Q86Y13	1208 aa	Known RBP	10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	ANKLE1	Q8NAG6	615 aa		10.45	□□□□□ -0.74
GARNL3-222	ENST00000498801	C1orf167	Q5SNV9	1468 aa		10.44	□□□□□ -0.74
GARNL3-222	ENST00000498801	ROCK2	O75116	1388 aa	Known RBP	10.44	□□□□□ -0.74
GARNL3-222	ENST00000498801	ZEB1	P37275	1124 aa	Predicted RBP	10.44	□□□□□ -0.74
GARNL3-222	ENST00000498801	SH3BP2	P78314	561 aa		10.44	□□□□□ -0.74
GARNL3-222	ENST00000498801	PLA2G2C	Q5R387	149 aa		10.44	□□□□□ -0.74
GARNL3-222	ENST00000498801	RNF135	Q8IUD6	432 aa		10.44	□□□□□ -0.74
GARNL3-222	ENST00000498801	PHTF2	Q8N3S3	785 aa		10.44	□□□□□ -0.74
GARNL3-222	ENST00000498801	EIF3A	Q14152	1382 aa	Known RBP	10.43	□□□□□ -0.74
GARNL3-222	ENST00000498801	TRIM32	Q13049	653 aa		10.43	□□□□□ -0.74
GARNL3-222	ENST00000498801	CDCA8	Q53HL2	280 aa		10.43	□□□□□ -0.74
GARNL3-222	ENST00000498801	PLEKHM2	Q8IWE5	1019 aa		10.43	□□□□□ -0.74
GARNL3-222	ENST00000498801	C1QTNF2	Q9BXJ5	285 aa		10.43	□□□□□ -0.74
GARNL3-222	ENST00000498801	SLAIN2	Q9P270	581 aa		10.43	□□□□□ -0.74
GARNL3-222	ENST00000498801	ROBO1	Q9Y6N7	1651 aa		10.43	□□□□□ -0.74
GARNL3-222	ENST00000498801	TULP4	Q9NRJ4	1543 aa		10.43	□□□□□ -0.74
GARNL3-222	ENST00000498801	FMN2	Q9NZ56	1722 aa		10.42	□□□□□ -0.74
GARNL3-222	ENST00000498801	ZBTB24	O43167	697 aa	Predicted RBP	10.42	□□□□□ -0.74
GARNL3-222	ENST00000498801	ATF3	P18847	181 aa		10.42	□□□□□ -0.74
GARNL3-222	ENST00000498801	NBPF1	Q3BBV0	1214 aa		10.42	□□□□□ -0.74
GARNL3-222	ENST00000498801	SLC10A4	Q96EP9	437 aa		10.42	□□□□□ -0.74
GARNL3-222	ENST00000498801	PRAM1	Q96QH2	718 aa		10.42	□□□□□ -0.74
GARNL3-222	ENST00000498801	ATG7	O95352	703 aa		10.41	□□□□□ -0.74
GARNL3-222	ENST00000498801	PPP1R18	Q6NYC8	613 aa		10.41	□□□□□ -0.74
GARNL3-222	ENST00000498801	WAPL	Q7Z5K2	1190 aa		10.41	□□□□□ -0.74
GARNL3-222	ENST00000498801	DEPDC4	Q8N2C3	294 aa		10.41	□□□□□ -0.74
GARNL3-222	ENST00000498801	PLPP7	Q8NBV4	271 aa		10.41	□□□□□ -0.74
GARNL3-222	ENST00000498801	STK26	Q9P289	416 aa		10.41	□□□□□ -0.74
GARNL3-222	ENST00000498801	ATP7B	P35670	1465 aa		10.41	□□□□□ -0.74
GARNL3-222	ENST00000498801	COL16A1	Q07092	1604 aa	Predicted RBP	10.4	□□□□□ -0.74
GARNL3-222	ENST00000498801	NHSL1	Q5SYE7	1610 aa		10.4	□□□□□ -0.74
GARNL3-222	ENST00000498801	CSB-PGBD3	P0DP91	1061 aa		10.4	□□□□□ -0.74
GARNL3-222	ENST00000498801	BRINP3	Q76B58	766 aa		10.4	□□□□□ -0.74
GARNL3-222	ENST00000498801	VRTN	Q9H8Y1	702 aa		10.4	□□□□□ -0.74
GARNL3-222	ENST00000498801	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.4	□□□□□ -0.74
GARNL3-222	ENST00000498801	UST	Q9Y2C2	406 aa		10.4	□□□□□ -0.74
GARNL3-222	ENST00000498801	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.39	□□□□□ -0.75
GARNL3-222	ENST00000498801	NCOA4	Q13772	614 aa		10.39	□□□□□ -0.75
GARNL3-222	ENST00000498801	TRMT44	Q8IYL2	757 aa	Known RBP	10.39	□□□□□ -0.75
GARNL3-222	ENST00000498801	CARD11	Q9BXL7	1154 aa		10.39	□□□□□ -0.75
GARNL3-222	ENST00000498801	TRAK1	Q9UPV9	953 aa		10.39	□□□□□ -0.75
GARNL3-222	ENST00000498801	USP32	Q8NFA0	1604 aa		10.39	□□□□□ -0.75
GARNL3-222	ENST00000498801	KIF1A	Q12756	1690 aa		10.38	□□□□□ -0.75
GARNL3-222	ENST00000498801	GIGYF1	O75420	1035 aa	Predicted RBP	10.38	□□□□□ -0.75
GARNL3-222	ENST00000498801	SKOR1	P84550	965 aa		10.38	□□□□□ -0.75
GARNL3-222	ENST00000498801	TOPAZ1	Q8N9V7	1692 aa		10.38	□□□□□ -0.75
GARNL3-222	ENST00000498801	WNT7B	P56706	349 aa		10.37	□□□□□ -0.75
GARNL3-222	ENST00000498801	PDE4C	Q08493	712 aa		10.37	□□□□□ -0.75
GARNL3-222	ENST00000498801	NBPF20	Q3BBV1	942 aa		10.37	□□□□□ -0.75
GARNL3-222	ENST00000498801	MAP7D1	Q3KQU3	841 aa		10.37	□□□□□ -0.75
GARNL3-222	ENST00000498801	TRAF7	Q6Q0C0	670 aa		10.37	□□□□□ -0.75
GARNL3-222	ENST00000498801	POGK	Q9P215	609 aa		10.37	□□□□□ -0.75
GARNL3-222	ENST00000498801	PXDN	Q92626	1479 aa		10.36	□□□□□ -0.75
GARNL3-222	ENST00000498801	WASL	O00401	505 aa	Predicted RBP	10.36	□□□□□ -0.75
GARNL3-222	ENST00000498801	RPIA	P49247	311 aa		10.36	□□□□□ -0.75
GARNL3-222	ENST00000498801	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.36	□□□□□ -0.75
GARNL3-222	ENST00000498801	QRICH2	Q9H0J4	1663 aa		10.36	□□□□□ -0.75
GARNL3-222	ENST00000498801	SOS2	Q07890	1332 aa	Predicted RBP	10.35	□□□□□ -0.75
GARNL3-222	ENST00000498801	LZTS3	O60299	673 aa	Predicted RBP	10.35	□□□□□ -0.75
GARNL3-222	ENST00000498801	HSPA1L	P34931	641 aa		10.35	□□□□□ -0.75
GARNL3-222	ENST00000498801	PIP4K2B	P78356	416 aa		10.35	□□□□□ -0.75
GARNL3-222	ENST00000498801	MMRN1	Q13201	1228 aa		10.35	□□□□□ -0.75
GARNL3-222	ENST00000498801	TSGA10IP	Q3SY00	556 aa		10.35	□□□□□ -0.75
GARNL3-222	ENST00000498801	MKRN1	Q9UHC7	482 aa	Known RBP	10.35	□□□□□ -0.75
GARNL3-222	ENST00000498801	CDV3	Q9UKY7	258 aa	Known RBP	10.35	□□□□□ -0.75
GARNL3-222	ENST00000498801	PRR36	Q9H6K5	1346 aa		10.34	□□□□□ -0.75
GARNL3-222	ENST00000498801	ESPN	B1AK53	854 aa		10.34	□□□□□ -0.75
GARNL3-222	ENST00000498801	ELOA	Q14241	798 aa	Known RBP	10.34	□□□□□ -0.75
GARNL3-222	ENST00000498801	EML3	Q32P44	896 aa		10.34	□□□□□ -0.75

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