RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	PIP4K2A	P48426	406 aa	Predicted RBP	13.67	□□□□□ -0.22
FXR1-222	ENST00000498658	TBC1D9B	Q66K14	1250 aa		13.67	□□□□□ -0.22
FXR1-222	ENST00000498658	BICDL1	Q6ZP65	573 aa		13.67	□□□□□ -0.22
FXR1-222	ENST00000498658	PDZRN3	Q9UPQ7	1066 aa		13.67	□□□□□ -0.22
FXR1-222	ENST00000498658	PXDNL	A1KZ92	1463 aa		13.67	□□□□□ -0.22
FXR1-222	ENST00000498658	CHD4	Q14839	1912 aa		13.66	□□□□□ -0.22
FXR1-222	ENST00000498658	BCOR	Q6W2J9	1755 aa		13.66	□□□□□ -0.22
FXR1-222	ENST00000498658	NPHP1	O15259	732 aa		13.66	□□□□□ -0.22
FXR1-222	ENST00000498658	MYL6B	P14649	208 aa		13.66	□□□□□ -0.22
FXR1-222	ENST00000498658	YBX3	P16989	372 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
FXR1-222	ENST00000498658	EIF2S2	P20042	333 aa	Known RBP	13.66	□□□□□ -0.22
FXR1-222	ENST00000498658	NGEF	Q8N5V2	710 aa		13.66	□□□□□ -0.22
FXR1-222	ENST00000498658	NRXN2	Q9P2S2	1712 aa		13.66	□□□□□ -0.22
FXR1-222	ENST00000498658		A0A0G2JLW4	131 aa		13.65	□□□□□ -0.22
FXR1-222	ENST00000498658	ZNF853	P0CG23	659 aa		13.65	□□□□□ -0.22
FXR1-222	ENST00000498658	CACNB1	Q02641	598 aa	Predicted RBP	13.65	□□□□□ -0.22
FXR1-222	ENST00000498658	PIM2	Q9P1W9	311 aa		13.65	□□□□□ -0.22
FXR1-222	ENST00000498658	AFDN	P55196	1824 aa	Known RBP	13.64	□□□□□ -0.23
FXR1-222	ENST00000498658	DPEP1	P16444	411 aa		13.64	□□□□□ -0.23
FXR1-222	ENST00000498658	PDE6B	P35913	854 aa		13.64	□□□□□ -0.23
FXR1-222	ENST00000498658	ST5	P78524	1137 aa		13.64	□□□□□ -0.23
FXR1-222	ENST00000498658	CNBD1	Q8NA66	436 aa		13.64	□□□□□ -0.23
FXR1-222	ENST00000498658	MBIP	Q9NS73	344 aa		13.64	□□□□□ -0.23
FXR1-222	ENST00000498658	MAP3K15	Q6ZN16	1313 aa		13.64	□□□□□ -0.23
FXR1-222	ENST00000498658	HDGFL1	Q5TGJ6	251 aa		13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	TPTE2	Q6XPS3	522 aa		13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	WWC1	Q8IX03	1113 aa		13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	BRIP1	Q9BX63	1249 aa		13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	IL16	Q14005	1332 aa		13.63	□□□□□ -0.23
FXR1-222	ENST00000498658	KIAA1551	Q9HCM1	1747 aa		13.62	□□□□□ -0.23
FXR1-222	ENST00000498658		H0YIN7	160 aa		13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	CAPN15	O75808	1086 aa		13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	PDIA6	Q15084	440 aa		13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	DALRD3	Q5D0E6	543 aa	Known RBP	13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	DUSP27	Q5VZP5	1158 aa		13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	PRR5L	Q6MZQ0	368 aa		13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	FAM9B	Q8IZU0	186 aa		13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	DBF4	Q9UBU7	674 aa	Predicted RBP	13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	BCS1L	Q9Y276	419 aa		13.62	□□□□□ -0.23
FXR1-222	ENST00000498658	KCNA3	P22001	575 aa		13.61	□□□□□ -0.23
FXR1-222	ENST00000498658	HLF	Q16534	295 aa		13.61	□□□□□ -0.23
FXR1-222	ENST00000498658	HSP90AB3P	Q58FF7	597 aa		13.61	□□□□□ -0.23
FXR1-222	ENST00000498658	WDR63	Q8IWG1	891 aa		13.61	□□□□□ -0.23
FXR1-222	ENST00000498658	NYX	Q9GZU5	481 aa		13.61	□□□□□ -0.23
FXR1-222	ENST00000498658	GTF2E1	P29083	439 aa	Predicted RBP	13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	CHRNA5	P30532	468 aa		13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	BRCA1	P38398	1863 aa	Known RBP	13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	TTLL7	Q6ZT98	887 aa		13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	LRP10	Q7Z4F1	713 aa		13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	C2CD5	Q86YS7	1000 aa		13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	NECTIN2	Q92692	538 aa		13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	HYPK	Q9NX55	129 aa		13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	ATP10D	Q9P241	1426 aa		13.6	□□□□□ -0.23
FXR1-222	ENST00000498658	CCER2	I3L3R5	266 aa		13.59	□□□□□ -0.23
FXR1-222	ENST00000498658	KRT24	Q2M2I5	525 aa		13.59	□□□□□ -0.23
FXR1-222	ENST00000498658	PARP10	Q53GL7	1025 aa		13.59	□□□□□ -0.23
FXR1-222	ENST00000498658	COPS6	Q7L5N1	327 aa		13.59	□□□□□ -0.23
FXR1-222	ENST00000498658	TTLL6	Q8N841	843 aa		13.59	□□□□□ -0.23
FXR1-222	ENST00000498658	ZBTB3	Q9H5J0	574 aa		13.59	□□□□□ -0.23
FXR1-222	ENST00000498658	WWC3	Q9ULE0	1092 aa		13.59	□□□□□ -0.23
FXR1-222	ENST00000498658	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.58	□□□□□ -0.23
FXR1-222	ENST00000498658	NUP98	P52948	1817 aa		13.58	□□□□□ -0.24
FXR1-222	ENST00000498658	XAGE3	Q8WTP9	111 aa		13.58	□□□□□ -0.24
FXR1-222	ENST00000498658	CHPF2	Q9P2E5	772 aa		13.58	□□□□□ -0.24
FXR1-222	ENST00000498658	ARFGEF1	Q9Y6D6	1849 aa		13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	AIMP1	Q12904	312 aa	Known RBP	13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	PROSER3	Q2NL68	480 aa		13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	CCDC30	Q5VVM6	783 aa		13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	ARHGAP27	Q6ZUM4	889 aa		13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	PPP1R42	Q7Z4L9	355 aa		13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	ZNF34	Q8IZ26	560 aa		13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	CNKSR1	Q969H4	720 aa		13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	DLEC1	Q9Y238	1755 aa		13.57	□□□□□ -0.24
FXR1-222	ENST00000498658	ANXA1	P04083	346 aa		13.56	□□□□□ -0.24
FXR1-222	ENST00000498658	STYK1	Q6J9G0	422 aa		13.56	□□□□□ -0.24
FXR1-222	ENST00000498658	C8orf58	Q8NAV2	365 aa		13.56	□□□□□ -0.24
FXR1-222	ENST00000498658	PLBD2	Q8NHP8	589 aa		13.56	□□□□□ -0.24
FXR1-222	ENST00000498658	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
FXR1-222	ENST00000498658	MYH16	Q9H6N6	1097 aa		13.56	□□□□□ -0.24
FXR1-222	ENST00000498658	RNF123	Q5XPI4	1314 aa		13.56	□□□□□ -0.24
FXR1-222	ENST00000498658	ANKRD31	Q8N7Z5	1873 aa		13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	KLRG2	A4D1S0	409 aa	Predicted RBP	13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	ELL2	O00472	640 aa	Predicted RBP	13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	SRGN	P10124	158 aa		13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	NPR1	P16066	1061 aa		13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	GPT	P24298	496 aa		13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	GOLGA2	Q08379	1002 aa		13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	ANKRD13D	Q6ZTN6	518 aa		13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	MASTL	Q96GX5	879 aa		13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	SALL2	Q9Y467	1007 aa	Predicted RBP	13.55	□□□□□ -0.24
FXR1-222	ENST00000498658	FAM177B	A6PVY3	158 aa		13.54	□□□□□ -0.24
FXR1-222	ENST00000498658	TCIRG1	Q13488	830 aa		13.54	□□□□□ -0.24
FXR1-222	ENST00000498658	SOGA3	Q5TF21	947 aa		13.54	□□□□□ -0.24
FXR1-222	ENST00000498658	CCDC24	Q8N4L8	307 aa		13.54	□□□□□ -0.24

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