RNA–Protein interactions for RNA: ENST00000498027.5

CAPN2-212, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 1,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-212ENST00000498027 CAPN15O75808 1086 aa19.34■□□□□ 0.69
CAPN2-212ENST00000498027 ATP6V1AP38606 617 aa19.34■□□□□ 0.69
CAPN2-212ENST00000498027 USP44Q9H0E7 712 aa19.34■□□□□ 0.69
CAPN2-212ENST00000498027 ZNF831Q5JPB2 1677 aa19.33■□□□□ 0.68
CAPN2-212ENST00000498027 UBTFL1P0CB47 393 aaPredicted RBP19.33■□□□□ 0.68
CAPN2-212ENST00000498027 PIP4K2AP48426 406 aaPredicted RBP19.33■□□□□ 0.68
CAPN2-212ENST00000498027 ANKRD44Q8N8A2 993 aa19.33■□□□□ 0.68
CAPN2-212ENST00000498027 IL6STP40189 918 aaPredicted RBP19.32■□□□□ 0.68
CAPN2-212ENST00000498027 BCL11BQ9C0K0 894 aaPredicted RBP19.32■□□□□ 0.68
CAPN2-212ENST00000498027 C1orf115Q9H7X2 142 aa19.32■□□□□ 0.68
CAPN2-212ENST00000498027 TJP1Q07157 1748 aa19.31■□□□□ 0.68
CAPN2-212ENST00000498027 HMMRO75330 724 aa19.31■□□□□ 0.68
CAPN2-212ENST00000498027 RXRBP28702 533 aa19.31■□□□□ 0.68
CAPN2-212ENST00000498027 DSG3P32926 999 aa19.31■□□□□ 0.68
CAPN2-212ENST00000498027 CEP85Q6P2H3 762 aa19.31■□□□□ 0.68
CAPN2-212ENST00000498027 SMC5Q8IY18 1101 aa19.31■□□□□ 0.68
CAPN2-212ENST00000498027 KIF6Q6ZMV9 814 aa19.3■□□□□ 0.68
CAPN2-212ENST00000498027 GCC1Q96CN9 775 aa19.3■□□□□ 0.68
CAPN2-212ENST00000498027 CCDC87Q9NVE4 849 aa19.3■□□□□ 0.68
CAPN2-212ENST00000498027 UTYO14607 1347 aa19.29■□□□□ 0.68
CAPN2-212ENST00000498027 KAT6BQ8WYB5 2073 aa19.29■□□□□ 0.68
CAPN2-212ENST00000498027 TTLL7Q6ZT98 887 aa19.29■□□□□ 0.68
CAPN2-212ENST00000498027 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
CAPN2-212ENST00000498027 MYD88Q99836 296 aa19.29■□□□□ 0.68
CAPN2-212ENST00000498027 C9orf78Q9NZ63 289 aaPredicted RBP19.29■□□□□ 0.68
CAPN2-212ENST00000498027 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
CAPN2-212ENST00000498027 IGKV5-2P06315 115 aa19.28■□□□□ 0.68
CAPN2-212ENST00000498027 ITPK1Q13572 414 aa19.28■□□□□ 0.68
CAPN2-212ENST00000498027 FAM182BQ5T319 152 aa19.28■□□□□ 0.68
CAPN2-212ENST00000498027 SIRT2Q8IXJ6 389 aa19.28■□□□□ 0.68
CAPN2-212ENST00000498027 ZBTB1Q9Y2K1 713 aa19.28■□□□□ 0.68
CAPN2-212ENST00000498027 GRM8O00222 908 aa19.27■□□□□ 0.68
CAPN2-212ENST00000498027 CRKLP46109 303 aaKnown RBP19.27■□□□□ 0.68
CAPN2-212ENST00000498027 INTS5Q6P9B9 1019 aaKnown RBP19.27■□□□□ 0.68
CAPN2-212ENST00000498027 HMGB2P26583 209 aaKnown RBP19.26■□□□□ 0.67
CAPN2-212ENST00000498027 GCKRQ14397 625 aa19.26■□□□□ 0.67
CAPN2-212ENST00000498027 CWF19L2Q2TBE0 894 aaKnown RBP19.26■□□□□ 0.67
CAPN2-212ENST00000498027 MAP3K15Q6ZN16 1313 aa19.26■□□□□ 0.67
CAPN2-212ENST00000498027 ERVV-1B6SEH8 477 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 EIF5P55010 431 aaKnown RBP19.25■□□□□ 0.67
CAPN2-212ENST00000498027 ATP8B2P98198 1209 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 HSP90AB3PQ58FF7 597 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 RC3H1Q5TC82 1133 aaKnown RBP19.25■□□□□ 0.67
CAPN2-212ENST00000498027 PTF1AQ7RTS3 328 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 LRRFIP2Q9Y608 721 aaKnown RBP19.25■□□□□ 0.67
CAPN2-212ENST00000498027 BTAF1O14981 1849 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 CNTNAP4Q9C0A0 1308 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 RREB1Q92766 1687 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 NBPF7P0C2Y1 421 aaPredicted RBP19.25■□□□□ 0.67
CAPN2-212ENST00000498027 TRIM28Q13263 835 aaKnown RBP19.25■□□□□ 0.67
CAPN2-212ENST00000498027 CCDC191Q8NCU4 936 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 DCTPP1Q9H773 170 aa19.25■□□□□ 0.67
CAPN2-212ENST00000498027 TCIRG1Q13488 830 aa19.24■□□□□ 0.67
CAPN2-212ENST00000498027 ZBTB3Q9H5J0 574 aa19.24■□□□□ 0.67
CAPN2-212ENST00000498027 ZNF330Q9Y3S2 320 aaPredicted RBP19.24■□□□□ 0.67
CAPN2-212ENST00000498027 COL15A1P39059 1388 aa19.23■□□□□ 0.67
CAPN2-212ENST00000498027 ARFGEF2Q9Y6D5 1785 aa19.23■□□□□ 0.67
CAPN2-212ENST00000498027 A0A087WZG4 1122 aa19.23■□□□□ 0.67
CAPN2-212ENST00000498027 MTX1Q13505 466 aa19.23■□□□□ 0.67
CAPN2-212ENST00000498027 GIGYF2Q6Y7W6 1299 aaKnown RBP19.23■□□□□ 0.67
CAPN2-212ENST00000498027 ISCA1Q9BUE6 129 aa19.23■□□□□ 0.67
CAPN2-212ENST00000498027 CWC25Q9NXE8 425 aaPredicted RBP19.23■□□□□ 0.67
CAPN2-212ENST00000498027 RGS17Q9UGC6 210 aaPredicted RBP19.23■□□□□ 0.67
CAPN2-212ENST00000498027 CCNL1Q9UK58 526 aaPredicted RBP19.23■□□□□ 0.67
CAPN2-212ENST00000498027 PDZRN3Q9UPQ7 1066 aa19.23■□□□□ 0.67
CAPN2-212ENST00000498027 SBF2Q86WG5 1849 aa19.22■□□□□ 0.67
CAPN2-212ENST00000498027 RGL2O15211 777 aa19.22■□□□□ 0.67
CAPN2-212ENST00000498027 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
CAPN2-212ENST00000498027 LINC00116Q8NCU8 138 aa19.22■□□□□ 0.67
CAPN2-212ENST00000498027 NUP188Q5SRE5 1749 aa19.22■□□□□ 0.67
CAPN2-212ENST00000498027 NUCB1Q02818 461 aa19.21■□□□□ 0.67
CAPN2-212ENST00000498027 BRWD3Q6RI45 1802 aa19.2■□□□□ 0.66
CAPN2-212ENST00000498027 ATP5J2-PTCD1G3V325 749 aa19.2■□□□□ 0.66
CAPN2-212ENST00000498027 SSH3Q8TE77 659 aa19.2■□□□□ 0.66
CAPN2-212ENST00000498027 COL5A3P25940 1745 aaPredicted RBP19.2■□□□□ 0.66
CAPN2-212ENST00000498027 POLA2Q14181 598 aa19.19■□□□□ 0.66
CAPN2-212ENST00000498027 SLC27A3Q5K4L6 730 aa19.19■□□□□ 0.66
CAPN2-212ENST00000498027 ARXQ96QS3 562 aa19.19■□□□□ 0.66
CAPN2-212ENST00000498027 H7C1W4 665 aa19.18■□□□□ 0.66
CAPN2-212ENST00000498027 POTEAQ6S8J7 498 aa19.18■□□□□ 0.66
CAPN2-212ENST00000498027 PPP1R42Q7Z4L9 355 aa19.18■□□□□ 0.66
CAPN2-212ENST00000498027 CHD1LQ86WJ1 897 aa19.18■□□□□ 0.66
CAPN2-212ENST00000498027 LY75O60449 1722 aa19.18■□□□□ 0.66
CAPN2-212ENST00000498027 RPS6KA4O75676 772 aa19.17■□□□□ 0.66
CAPN2-212ENST00000498027 TRIM37O94972 964 aa19.17■□□□□ 0.66
CAPN2-212ENST00000498027 SUCLG2Q96I99 432 aa19.17■□□□□ 0.66
CAPN2-212ENST00000498027 ZBTB47Q9UFB7 747 aaPredicted RBP19.17■□□□□ 0.66
CAPN2-212ENST00000498027 PNMA6EA0A0J9YXQ4 647 aa19.17■□□□□ 0.66
CAPN2-212ENST00000498027 CASP7P55210 303 aa19.17■□□□□ 0.66
CAPN2-212ENST00000498027 ANKRD45Q5TZF3 282 aa19.17■□□□□ 0.66
CAPN2-212ENST00000498027 SRGAP3O43295 1099 aa19.16■□□□□ 0.66
CAPN2-212ENST00000498027 HLFQ16534 295 aa19.16■□□□□ 0.66
CAPN2-212ENST00000498027 UBE3BQ7Z3V4 1068 aa19.16■□□□□ 0.66
CAPN2-212ENST00000498027 TBC1D2BQ9UPU7 963 aa19.16■□□□□ 0.66
CAPN2-212ENST00000498027 ZNF652Q9Y2D9 606 aa19.16■□□□□ 0.66
CAPN2-212ENST00000498027 CAMTA2O94983 1202 aa19.15■□□□□ 0.66
CAPN2-212ENST00000498027 RGS3P49796 1198 aa19.15■□□□□ 0.66
CAPN2-212ENST00000498027 HSP90AB4PQ58FF6 505 aa19.15■□□□□ 0.66
CAPN2-212ENST00000498027 CLEC4GQ6UXB4 293 aa19.15■□□□□ 0.66
CAPN2-212ENST00000498027 KAZALD1Q96I82 304 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms