RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	CACNA1S	Q13698	1873 aa		32.61	■■■□□ 2.81
HDAC10-219	ENST00000497483	ERBB4	Q15303	1308 aa		32.6	■■■□□ 2.81
HDAC10-219	ENST00000497483	ST5	P78524	1137 aa		32.59	■■■□□ 2.81
HDAC10-219	ENST00000497483	CCDC146	Q8IYE0	955 aa		32.59	■■■□□ 2.81
HDAC10-219	ENST00000497483	C9orf131	Q5VYM1	1079 aa		32.58	■■■□□ 2.81
HDAC10-219	ENST00000497483	ADAMTS8	Q9UP79	889 aa		32.57	■■■□□ 2.8
HDAC10-219	ENST00000497483	FER1L6	Q2WGJ9	1857 aa		32.57	■■■□□ 2.8
HDAC10-219	ENST00000497483	NPHP1	O15259	732 aa		32.56	■■■□□ 2.8
HDAC10-219	ENST00000497483	CCDC88A	Q3V6T2	1871 aa		32.56	■■■□□ 2.8
HDAC10-219	ENST00000497483	NBPF5P	Q86XG9	351 aa	Predicted RBP	32.55	■■■□□ 2.8
HDAC10-219	ENST00000497483	CCDC24	Q8N4L8	307 aa		32.55	■■■□□ 2.8
HDAC10-219	ENST00000497483	RRP7A	Q9Y3A4	280 aa	Known RBP	32.55	■■■□□ 2.8
HDAC10-219	ENST00000497483	TIAM2	Q8IVF5	1701 aa		32.54	■■■□□ 2.8
HDAC10-219	ENST00000497483	ERVV-1	B6SEH8	477 aa		32.54	■■■□□ 2.8
HDAC10-219	ENST00000497483	NIP7	Q9Y221	180 aa	Known RBP eCLIP	32.54	■■■□□ 2.8
HDAC10-219	ENST00000497483	RNF181	Q9P0P0	153 aa		32.53	■■■□□ 2.8
HDAC10-219	ENST00000497483	MAP3K15	Q6ZN16	1313 aa		32.52	■■■□□ 2.8
HDAC10-219	ENST00000497483	SLX4	Q8IY92	1834 aa		32.52	■■■□□ 2.8
HDAC10-219	ENST00000497483	KIF3C	O14782	793 aa		32.52	■■■□□ 2.8
HDAC10-219	ENST00000497483	HLF	Q16534	295 aa		32.52	■■■□□ 2.8
HDAC10-219	ENST00000497483	TRIM35	Q9UPQ4	493 aa		32.52	■■■□□ 2.8
HDAC10-219	ENST00000497483	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.52	■■■□□ 2.8
HDAC10-219	ENST00000497483	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.51	■■■□□ 2.8
HDAC10-219	ENST00000497483	SRGN	P10124	158 aa		32.51	■■■□□ 2.79
HDAC10-219	ENST00000497483	STYK1	Q6J9G0	422 aa		32.51	■■■□□ 2.79
HDAC10-219	ENST00000497483	ZNF622	Q969S3	477 aa	Known RBP eCLIP	32.51	■■■□□ 2.79
HDAC10-219	ENST00000497483	DICER1	Q9UPY3	1922 aa	Known RBP	32.51	■■■□□ 2.79
HDAC10-219	ENST00000497483	SENP3-EIF4A1	A0A087X0R7	540 aa		32.5	■■■□□ 2.79
HDAC10-219	ENST00000497483	RASSF7	Q02833	373 aa		32.5	■■■□□ 2.79
HDAC10-219	ENST00000497483	NEUROD2	Q15784	382 aa		32.5	■■■□□ 2.79
HDAC10-219	ENST00000497483	MYL6B	P14649	208 aa		32.49	■■■□□ 2.79
HDAC10-219	ENST00000497483	TPTE2	Q6XPS3	522 aa		32.49	■■■□□ 2.79
HDAC10-219	ENST00000497483	KIF6	Q6ZMV9	814 aa		32.49	■■■□□ 2.79
HDAC10-219	ENST00000497483	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.48	■■■□□ 2.79
HDAC10-219	ENST00000497483	CNKSR1	Q969H4	720 aa		32.48	■■■□□ 2.79
HDAC10-219	ENST00000497483	ANKRD36C	Q5JPF3	1778 aa		32.47	■■■□□ 2.79
HDAC10-219	ENST00000497483	KLRG2	A4D1S0	409 aa	Predicted RBP	32.47	■■■□□ 2.79
HDAC10-219	ENST00000497483	CHL1	O00533	1208 aa		32.47	■■■□□ 2.79
HDAC10-219	ENST00000497483	LMNB1	P20700	586 aa		32.47	■■■□□ 2.79
HDAC10-219	ENST00000497483	TTLL7	Q6ZT98	887 aa		32.47	■■■□□ 2.79
HDAC10-219	ENST00000497483	LRP10	Q7Z4F1	713 aa		32.47	■■■□□ 2.79
HDAC10-219	ENST00000497483	NGEF	Q8N5V2	710 aa		32.47	■■■□□ 2.79
HDAC10-219	ENST00000497483	MASTL	Q96GX5	879 aa		32.47	■■■□□ 2.79
HDAC10-219	ENST00000497483	NFKBIE	O00221	500 aa		32.46	■■■□□ 2.79
HDAC10-219	ENST00000497483	PDIA6	Q15084	440 aa		32.45	■■■□□ 2.79
HDAC10-219	ENST00000497483	RIC1	Q4ADV7	1423 aa		32.44	■■■□□ 2.78
HDAC10-219	ENST00000497483	PRELP	P51888	382 aa		32.43	■■■□□ 2.78
HDAC10-219	ENST00000497483	NYX	Q9GZU5	481 aa		32.43	■■■□□ 2.78
HDAC10-219	ENST00000497483	C21orf2	O43822	256 aa		32.42	■■■□□ 2.78
HDAC10-219	ENST00000497483	PRPF40B	Q6NWY9	871 aa	Known RBP	32.42	■■■□□ 2.78
HDAC10-219	ENST00000497483	KDM2B	Q8NHM5	1336 aa		32.42	■■■□□ 2.78
HDAC10-219	ENST00000497483	LTBP3	Q9NS15	1303 aa		32.42	■■■□□ 2.78
HDAC10-219	ENST00000497483	NPR1	P16066	1061 aa		32.41	■■■□□ 2.78
HDAC10-219	ENST00000497483	EIF2S2	P20042	333 aa	Known RBP	32.41	■■■□□ 2.78
HDAC10-219	ENST00000497483	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.41	■■■□□ 2.78
HDAC10-219	ENST00000497483	ZBTB3	Q9H5J0	574 aa		32.41	■■■□□ 2.78
HDAC10-219	ENST00000497483	NMRK2	Q9NPI5	230 aa		32.41	■■■□□ 2.78
HDAC10-219	ENST00000497483	SOGA3	Q5TF21	947 aa		32.4	■■■□□ 2.78
HDAC10-219	ENST00000497483	UBN2	Q6ZU65	1347 aa		32.4	■■■□□ 2.78
HDAC10-219	ENST00000497483	ABCC12	Q96J65	1359 aa		32.4	■■■□□ 2.78
HDAC10-219	ENST00000497483	FAM177B	A6PVY3	158 aa		32.39	■■■□□ 2.78
HDAC10-219	ENST00000497483	HOXB7	P09629	217 aa		32.38	■■■□□ 2.77
HDAC10-219	ENST00000497483	PROSER3	Q2NL68	480 aa		32.38	■■■□□ 2.77
HDAC10-219	ENST00000497483	ZNF34	Q8IZ26	560 aa		32.38	■■■□□ 2.77
HDAC10-219	ENST00000497483	CFAP44	Q96MT7	982 aa		32.38	■■■□□ 2.77
HDAC10-219	ENST00000497483	TOMM70	O94826	608 aa		32.36	■■■□□ 2.77
HDAC10-219	ENST00000497483	GTF2E1	P29083	439 aa	Predicted RBP	32.36	■■■□□ 2.77
HDAC10-219	ENST00000497483	LAS1L	Q9Y4W2	734 aa	Known RBP	32.36	■■■□□ 2.77
HDAC10-219	ENST00000497483	KRT24	Q2M2I5	525 aa		32.35	■■■□□ 2.77
HDAC10-219	ENST00000497483	CRY2	Q49AN0	593 aa		32.35	■■■□□ 2.77
HDAC10-219	ENST00000497483	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.35	■■■□□ 2.77
HDAC10-219	ENST00000497483	APAF1	O14727	1248 aa		32.34	■■■□□ 2.77
HDAC10-219	ENST00000497483	GPT	P24298	496 aa		32.34	■■■□□ 2.77
HDAC10-219	ENST00000497483	C7orf43	Q8WVR3	580 aa		32.34	■■■□□ 2.77
HDAC10-219	ENST00000497483	TAOK3	Q9H2K8	898 aa		32.34	■■■□□ 2.77
HDAC10-219	ENST00000497483	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.34	■■■□□ 2.77
HDAC10-219	ENST00000497483	ANXA1	P04083	346 aa		32.33	■■■□□ 2.77
HDAC10-219	ENST00000497483	HSPA6	P17066	643 aa		32.33	■■■□□ 2.77
HDAC10-219	ENST00000497483	PARP10	Q53GL7	1025 aa		32.33	■■■□□ 2.77
HDAC10-219	ENST00000497483	NUTM1	Q86Y26	1132 aa		32.33	■■■□□ 2.77
HDAC10-219	ENST00000497483	NTSR2	O95665	410 aa		32.32	■■■□□ 2.76
HDAC10-219	ENST00000497483	ZNF853	P0CG23	659 aa		32.32	■■■□□ 2.76
HDAC10-219	ENST00000497483	ERFE	Q4G0M1	354 aa		32.32	■■■□□ 2.76
HDAC10-219	ENST00000497483	SUSD4	Q5VX71	490 aa		32.32	■■■□□ 2.76
HDAC10-219	ENST00000497483	WDR90	Q96KV7	1748 aa		32.31	■■■□□ 2.76
HDAC10-219	ENST00000497483	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.31	■■■□□ 2.76
HDAC10-219	ENST00000497483	MBIP	Q9NS73	344 aa		32.31	■■■□□ 2.76
HDAC10-219	ENST00000497483	GLTPD2	A6NH11	291 aa		32.3	■■■□□ 2.76
HDAC10-219	ENST00000497483	ALDH1B1	P30837	517 aa		32.3	■■■□□ 2.76
HDAC10-219	ENST00000497483	CALD1	Q05682	793 aa	Known RBP	32.3	■■■□□ 2.76
HDAC10-219	ENST00000497483	CCDC93	Q567U6	631 aa		32.3	■■■□□ 2.76
HDAC10-219	ENST00000497483	PPP1R42	Q7Z4L9	355 aa		32.3	■■■□□ 2.76
HDAC10-219	ENST00000497483	NECTIN2	Q92692	538 aa		32.3	■■■□□ 2.76
HDAC10-219	ENST00000497483	CEP350	Q5VT06	3117 aa		32.3	■■■□□ 2.76
HDAC10-219	ENST00000497483	HDGFL1	Q5TGJ6	251 aa		32.29	■■■□□ 2.76
HDAC10-219	ENST00000497483	COPS6	Q7L5N1	327 aa		32.29	■■■□□ 2.76
HDAC10-219	ENST00000497483	XAGE3	Q8WTP9	111 aa		32.29	■■■□□ 2.76
HDAC10-219	ENST00000497483	IFT57	Q9NWB7	429 aa		32.29	■■■□□ 2.76
HDAC10-219	ENST00000497483	RNF123	Q5XPI4	1314 aa		32.28	■■■□□ 2.76
HDAC10-219	ENST00000497483	LAMB2	P55268	1798 aa		32.28	■■■□□ 2.76

Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms