RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 CLCN6P51797 869 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 GSDMDP57764 484 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 CCDC144BQ3MJ40 725 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 RUFY3Q7L099 469 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 CCDC144CPQ8IYA2 1237 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 THUMPD2Q9BTF0 503 aaKnown RBP15.32■□□□□ 0.04
VEGFA-215ENST00000497139 CHD2O14647 1828 aaKnown RBP15.32■□□□□ 0.04
VEGFA-215ENST00000497139 UBXN6Q9BZV1 441 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 BRMS1Q9HCU9 246 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 RSPH14Q9UHP6 348 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 SNX14Q9Y5W7 946 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 GJB2P29033 226 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 CCDC93Q567U6 631 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 CHMP4AQ9BY43 222 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 PREX1Q8TCU6 1659 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 CASQ1P31415 396 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 CCT4P50991 539 aaKnown RBP15.31■□□□□ 0.04
VEGFA-215ENST00000497139 TMCO3Q6UWJ1 677 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 TTC6Q86TZ1 520 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.31■□□□□ 0.04
VEGFA-215ENST00000497139 RILPL2Q969X0 211 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 PSD3Q9NYI0 1048 aa15.31■□□□□ 0.04
VEGFA-215ENST00000497139 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.31■□□□□ 0.043e-6■■■■□ 21.5
VEGFA-215ENST00000497139 PDCP20941 246 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 CCZ1BP86790 482 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 CCZ1P86791 482 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-215ENST00000497139 TMEM132EQ6IEE7 984 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 HDGFL2Q7Z4V5 671 aaPredicted RBP15.3■□□□□ 0.04
VEGFA-215ENST00000497139 GTF3C6Q969F1 213 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 SRRTQ9BXP5 876 aaKnown RBP15.3■□□□□ 0.04
VEGFA-215ENST00000497139 NEXMIFQ5QGS0 1516 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 USP27XA6NNY8 438 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 GOLGA6L19H0YKK7 550 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 LIG1P18858 919 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 VPS53Q5VIR6 699 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 GOLGA6L1Q8N7Z2 621 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 MMP14P50281 582 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 IQUBQ8NA54 791 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 DACT1Q9NYF0 836 aa15.3■□□□□ 0.04
VEGFA-215ENST00000497139 PSDA5PKW4 1024 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-215ENST00000497139 GOLGA6L4A6NEF3 574 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 SRPK2P78362 688 aaKnown RBP15.29■□□□□ 0.04
VEGFA-215ENST00000497139 GOLGA5Q8TBA6 731 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 TM6SF1Q9BZW5 370 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 IMPACTQ9P2X3 320 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 PIK3C2BO00750 1634 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 ARHGEF10O15013 1369 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 SGSM2O43147 1006 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 DHX16O60231 1041 aaKnown RBP15.29■□□□□ 0.04
VEGFA-215ENST00000497139 MAPK8IP2Q13387 824 aaPredicted RBP15.29■□□□□ 0.04
VEGFA-215ENST00000497139 SNW1Q13573 536 aaKnown RBP15.29■□□□□ 0.04
VEGFA-215ENST00000497139 GGT6Q6P531 493 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 HYPKQ9NX55 129 aa15.29■□□□□ 0.04
VEGFA-215ENST00000497139 CCDC69A6NI79 296 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 MYO1CO00159 1063 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 GNAI2P04899 355 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 ERCC6LQ2NKX8 1250 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 KRBA2Q6ZNG9 492 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 AK7Q96M32 723 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.28■□□□□ 0.048e-8■□□□□ 9.1
VEGFA-215ENST00000497139 LRRFIP2Q9Y608 721 aaKnown RBP15.28■□□□□ 0.04
VEGFA-215ENST00000497139 YTHDC2Q9H6S0 1430 aaKnown RBP15.28■□□□□ 0.04
VEGFA-215ENST00000497139 DIP2CQ9Y2E4 1556 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 CAMK4Q16566 473 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 SYT10Q6XYQ8 523 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 ZFP91Q96JP5 570 aaPredicted RBP15.28■□□□□ 0.04
VEGFA-215ENST00000497139 POLKQ9UBT6 870 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
VEGFA-215ENST00000497139 CCP110O43303 1012 aa15.27■□□□□ 0.04
VEGFA-215ENST00000497139 IQCB1Q15051 598 aa15.27■□□□□ 0.04
VEGFA-215ENST00000497139 ZSCAN26Q16670 478 aa15.27■□□□□ 0.04
VEGFA-215ENST00000497139 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
VEGFA-215ENST00000497139 ICE2Q659A1 982 aa15.27■□□□□ 0.04
VEGFA-215ENST00000497139 CKAP2LQ8IYA6 745 aa15.27■□□□□ 0.04
VEGFA-215ENST00000497139 SIGLEC1Q9BZZ2 1709 aa15.27■□□□□ 0.03
VEGFA-215ENST00000497139 CTAGE5O15320 804 aa15.27■□□□□ 0.03
VEGFA-215ENST00000497139 CHGAP10645 457 aaKnown RBP15.27■□□□□ 0.03
VEGFA-215ENST00000497139 TRERF1Q96PN7 1200 aa15.27■□□□□ 0.03
VEGFA-215ENST00000497139 OSBPL5Q9H0X9 879 aaPredicted RBP15.27■□□□□ 0.03
VEGFA-215ENST00000497139 CFAP65Q6ZU64 1925 aaKnown RBP15.27■□□□□ 0.03
VEGFA-215ENST00000497139 VPS37CA5D8V6 355 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-215ENST00000497139 KRT24Q2M2I5 525 aa15.26■□□□□ 0.03
VEGFA-215ENST00000497139 ARHGAP29Q52LW3 1261 aa15.26■□□□□ 0.03
VEGFA-215ENST00000497139 FBXO18Q8NFZ0 1043 aa15.26■□□□□ 0.03
VEGFA-215ENST00000497139 LSG1Q9H089 658 aaKnown RBP15.26■□□□□ 0.03
VEGFA-215ENST00000497139 DNAJC25Q9H1X3 360 aa15.26■□□□□ 0.03
VEGFA-215ENST00000497139 CRYBG1Q9Y4K1 1723 aa15.26■□□□□ 0.03
VEGFA-215ENST00000497139 GIGYF1O75420 1035 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-215ENST00000497139 GTF2A1P52655 376 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-215ENST00000497139 NEK11Q8NG66 645 aa15.26■□□□□ 0.03
VEGFA-215ENST00000497139 EXOC4Q96A65 974 aa15.26■□□□□ 0.03
VEGFA-215ENST00000497139 ORC3Q9UBD5 711 aaPredicted RBP15.26■□□□□ 0.03
VEGFA-215ENST00000497139 MAP2P11137 1827 aaKnown RBP15.26■□□□□ 0.03
VEGFA-215ENST00000497139 SETD1AO15047 1707 aaKnown RBP15.25■□□□□ 0.03
VEGFA-215ENST00000497139 PHLPP2Q6ZVD8 1323 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 NRDCO43847 1150 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 IL13P35225 146 aa15.25■□□□□ 0.03
VEGFA-215ENST00000497139 CCDC83Q8IWF9 413 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms