RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 FAM157BP0CG42 384 aa11.02□□□□□ -0.65
MDM2-220ENST00000496959 MAPTP10636 758 aaKnown RBP11.02□□□□□ -0.65
MDM2-220ENST00000496959 CTBSQ01459 385 aa11.02□□□□□ -0.65
MDM2-220ENST00000496959 TNP2Q05952 138 aa11.02□□□□□ -0.65
MDM2-220ENST00000496959 LRRC69Q6ZNQ3 347 aa11.02□□□□□ -0.65
MDM2-220ENST00000496959 C2orf49Q9BVC5 232 aaPredicted RBP11.02□□□□□ -0.65
MDM2-220ENST00000496959 OXCT2Q9BYC2 517 aaPredicted RBP11.02□□□□□ -0.65
MDM2-220ENST00000496959 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
MDM2-220ENST00000496959 LRRC4BQ9NT99 713 aa11.01□□□□□ -0.65
MDM2-220ENST00000496959 ANKIB1Q9P2G1 1089 aa11.01□□□□□ -0.65
MDM2-220ENST00000496959 IGFBP4P22692 258 aa11□□□□□ -0.65
MDM2-220ENST00000496959 MARSP56192 900 aaKnown RBP11□□□□□ -0.65
MDM2-220ENST00000496959 C7orf43Q8WVR3 580 aa11□□□□□ -0.65
MDM2-220ENST00000496959 GDF2Q9UK05 429 aaPredicted RBP11□□□□□ -0.65
MDM2-220ENST00000496959 NOVA2Q9UNW9 492 aaKnown RBP11□□□□□ -0.65
MDM2-220ENST00000496959 ARID3CA6NKF2 412 aa10.99□□□□□ -0.65
MDM2-220ENST00000496959 C2CD2LO14523 706 aa10.99□□□□□ -0.65
MDM2-220ENST00000496959 LGR5O75473 907 aa10.99□□□□□ -0.65
MDM2-220ENST00000496959 FAM182BQ5T319 152 aa10.99□□□□□ -0.65
MDM2-220ENST00000496959 ALDH16A1Q8IZ83 802 aa10.99□□□□□ -0.65
MDM2-220ENST00000496959 GOLGA6L1Q8N7Z2 621 aa10.99□□□□□ -0.65
MDM2-220ENST00000496959 NEDD1Q8NHV4 660 aa10.99□□□□□ -0.65
MDM2-220ENST00000496959 LAMC2Q13753 1193 aa10.98□□□□□ -0.65
MDM2-220ENST00000496959 HIF1AQ16665 826 aa10.98□□□□□ -0.65
MDM2-220ENST00000496959 MARK1Q9P0L2 795 aa10.98□□□□□ -0.65
MDM2-220ENST00000496959 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.97□□□□□ -0.65
MDM2-220ENST00000496959 RNF225M0QZC1 329 aaPredicted RBP10.97□□□□□ -0.65
MDM2-220ENST00000496959 OIP5O43482 229 aa10.97□□□□□ -0.65
MDM2-220ENST00000496959 CD33P20138 364 aa10.97□□□□□ -0.65
MDM2-220ENST00000496959 ELOAQ14241 798 aaKnown RBP10.97□□□□□ -0.65
MDM2-220ENST00000496959 NGLY1Q96IV0 654 aa10.97□□□□□ -0.65
MDM2-220ENST00000496959 EFSO43281 561 aa10.95□□□□□ -0.66
MDM2-220ENST00000496959 ARAFP10398 606 aa10.95□□□□□ -0.66
MDM2-220ENST00000496959 GALNT6Q8NCL4 622 aa10.95□□□□□ -0.66
MDM2-220ENST00000496959 SCARF2Q96GP6 870 aaPredicted RBP10.95□□□□□ -0.66
MDM2-220ENST00000496959 SUSD3Q96L08 255 aa10.95□□□□□ -0.66
MDM2-220ENST00000496959 PRR12Q9ULL5 1215 aa10.95□□□□□ -0.66
MDM2-220ENST00000496959 FOXO3O43524 673 aa10.94□□□□□ -0.66
MDM2-220ENST00000496959 ATG7O95352 703 aa10.94□□□□□ -0.66
MDM2-220ENST00000496959 WEE1P30291 646 aa10.94□□□□□ -0.66
MDM2-220ENST00000496959 SRPK2P78362 688 aaKnown RBP10.94□□□□□ -0.66
MDM2-220ENST00000496959 SWI5Q1ZZU3 235 aa10.94□□□□□ -0.66
MDM2-220ENST00000496959 VTI1AQ96AJ9 217 aa10.94□□□□□ -0.66
MDM2-220ENST00000496959 PBXIP1Q96AQ6 731 aa10.94□□□□□ -0.66
MDM2-220ENST00000496959 HSH2DQ96JZ2 352 aa10.94□□□□□ -0.66
MDM2-220ENST00000496959 GGA1Q9UJY5 639 aa10.94□□□□□ -0.66
MDM2-220ENST00000496959 DNMT3AQ9Y6K1 912 aaPredicted RBP10.94□□□□□ -0.66
MDM2-220ENST00000496959 ACIN1Q9UKV3 1341 aaKnown RBP10.93□□□□□ -0.66
MDM2-220ENST00000496959 KCNMA1Q12791 1236 aa10.93□□□□□ -0.66
MDM2-220ENST00000496959 EDARADDQ8WWZ3 215 aa10.93□□□□□ -0.66
MDM2-220ENST00000496959 CEP63Q96MT8 703 aa10.93□□□□□ -0.66
MDM2-220ENST00000496959 AVENQ9NQS1 362 aaPredicted RBP10.93□□□□□ -0.66
MDM2-220ENST00000496959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.93□□□□□ -0.661e-8■■■■■ 50.5
MDM2-220ENST00000496959 RTN1Q16799 776 aa10.92□□□□□ -0.66
MDM2-220ENST00000496959 SLCO4C1Q6ZQN7 724 aa10.92□□□□□ -0.66
MDM2-220ENST00000496959 STRN4Q9NRL3 753 aa10.92□□□□□ -0.66
MDM2-220ENST00000496959 HCN2Q9UL51 889 aa10.92□□□□□ -0.66
MDM2-220ENST00000496959 ZMIZ1Q9ULJ6 1067 aa10.92□□□□□ -0.66
MDM2-220ENST00000496959 ADH6P28332 368 aa10.91□□□□□ -0.66
MDM2-220ENST00000496959 ZNF280CQ8ND82 737 aa10.91□□□□□ -0.66
MDM2-220ENST00000496959 BRD7Q9NPI1 651 aa10.91□□□□□ -0.66
MDM2-220ENST00000496959 NEURL1BA8MQ27 555 aa10.9□□□□□ -0.66
MDM2-220ENST00000496959 C1orf229Q6ZS94 237 aaPredicted RBP10.9□□□□□ -0.66
MDM2-220ENST00000496959 PODNQ7Z5L7 613 aa10.9□□□□□ -0.66
MDM2-220ENST00000496959 SFSWAPQ12872 951 aaKnown RBP10.89□□□□□ -0.67
MDM2-220ENST00000496959 ZNF468Q5VIY5 522 aaPredicted RBP10.89□□□□□ -0.67
MDM2-220ENST00000496959 ERICH6Q7L0X2 663 aa10.89□□□□□ -0.67
MDM2-220ENST00000496959 BEND7Q8N7W2 519 aaPredicted RBP10.89□□□□□ -0.67
MDM2-220ENST00000496959 STK32AQ8WU08 396 aa10.89□□□□□ -0.67
MDM2-220ENST00000496959 SHISA8B8ZZ34 492 aa10.88□□□□□ -0.67
MDM2-220ENST00000496959 TYRO3Q06418 890 aa10.88□□□□□ -0.67
MDM2-220ENST00000496959 BTLAQ7Z6A9 289 aa10.88□□□□□ -0.67
MDM2-220ENST00000496959 CCDC82Q8N4S0 544 aa10.88□□□□□ -0.67
MDM2-220ENST00000496959 KCNH4Q9UQ05 1017 aa10.88□□□□□ -0.67
MDM2-220ENST00000496959 PHF20L1A8MW92 1017 aa10.87□□□□□ -0.67
MDM2-220ENST00000496959 EPXP11678 715 aa10.87□□□□□ -0.67
MDM2-220ENST00000496959 AMPD1P23109 780 aa10.87□□□□□ -0.67
MDM2-220ENST00000496959 PCBP4P57723 403 aaKnown RBP10.87□□□□□ -0.67
MDM2-220ENST00000496959 PRIMPOLQ96LW4 560 aa10.87□□□□□ -0.67
MDM2-220ENST00000496959 TGFBR3LH3BV60 316 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 PRMT3O60678 531 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 IRS1P35568 1242 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 KCNQ4P56696 695 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 RASSF7Q02833 373 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 NEUROD1Q13562 356 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 TMEM164Q5U3C3 297 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 IER5Q5VY09 327 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 KANK3Q6NY19 840 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 RRAGCQ9HB90 399 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 KLF15Q9UIH9 416 aa10.86□□□□□ -0.67
MDM2-220ENST00000496959 CNTNAP5Q8WYK1 1306 aa10.85□□□□□ -0.67
MDM2-220ENST00000496959 FAM69CQ0P6D2 419 aa10.85□□□□□ -0.67
MDM2-220ENST00000496959 SYT9Q86SS6 491 aa10.85□□□□□ -0.67
MDM2-220ENST00000496959 SPEM2Q0P670 501 aa10.84□□□□□ -0.67
MDM2-220ENST00000496959 FKBP5Q13451 457 aaPredicted RBP10.84□□□□□ -0.67
MDM2-220ENST00000496959 MYO19Q96H55 970 aa10.84□□□□□ -0.67
MDM2-220ENST00000496959 BTBD6Q96KE9 485 aa10.84□□□□□ -0.67
MDM2-220ENST00000496959 QTRT2Q9H974 415 aaKnown RBP10.84□□□□□ -0.67
MDM2-220ENST00000496959 DGKZQ13574 1117 aa10.83□□□□□ -0.68
MDM2-220ENST00000496959 GRIN2CQ14957 1233 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms