RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 NUCB2P80303 420 aa18.03■□□□□ 0.48
CHTOP-206ENST00000495554 CWF19L2Q2TBE0 894 aaKnown RBP18.03■□□□□ 0.48
CHTOP-206ENST00000495554 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
CHTOP-206ENST00000495554 NUTM1Q86Y26 1132 aa18.02■□□□□ 0.48
CHTOP-206ENST00000495554 C5P01031 1676 aa18.02■□□□□ 0.48
CHTOP-206ENST00000495554 EPB41L2O43491 1005 aaKnown RBP18.02■□□□□ 0.47
CHTOP-206ENST00000495554 SSFA2P28290 1259 aa18.02■□□□□ 0.47
CHTOP-206ENST00000495554 ANAPC15P60006 121 aa18.02■□□□□ 0.47
CHTOP-206ENST00000495554 AIMP1Q12904 312 aaKnown RBP18.02■□□□□ 0.47
CHTOP-206ENST00000495554 C9orf78Q9NZ63 289 aaPredicted RBP18.02■□□□□ 0.47
CHTOP-206ENST00000495554 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
CHTOP-206ENST00000495554 UNC5CLQ8IV45 518 aa18.01■□□□□ 0.47
CHTOP-206ENST00000495554 GOLGA6L22H0YM25 854 aa18.01■□□□□ 0.47
CHTOP-206ENST00000495554 TOM1L2Q6ZVM7 507 aa18.01■□□□□ 0.47
CHTOP-206ENST00000495554 ANO2Q9NQ90 1003 aa18.01■□□□□ 0.47
CHTOP-206ENST00000495554 DDX58O95786 925 aaKnown RBP18■□□□□ 0.47
CHTOP-206ENST00000495554 BRD2P25440 801 aaKnown RBP18■□□□□ 0.47
CHTOP-206ENST00000495554 MCM2P49736 904 aa18■□□□□ 0.47
CHTOP-206ENST00000495554 LINS1Q8NG48 757 aa18■□□□□ 0.47
CHTOP-206ENST00000495554 PI4K2BQ8TCG2 481 aa18■□□□□ 0.47
CHTOP-206ENST00000495554 COL5A2P05997 1499 aaPredicted RBP18■□□□□ 0.47
CHTOP-206ENST00000495554 SNRPA1P09661 255 aaKnown RBP17.99■□□□□ 0.47
CHTOP-206ENST00000495554 NEK4P51957 841 aa17.99■□□□□ 0.47
CHTOP-206ENST00000495554 CABP4P57796 275 aa17.99■□□□□ 0.47
CHTOP-206ENST00000495554 IGKV5-2P06315 115 aa17.99■□□□□ 0.47
CHTOP-206ENST00000495554 MYL6BP14649 208 aa17.99■□□□□ 0.47
CHTOP-206ENST00000495554 ZCRB1Q8TBF4 217 aaKnown RBP17.99■□□□□ 0.47
CHTOP-206ENST00000495554 IL17RAQ96F46 866 aa17.99■□□□□ 0.47
CHTOP-206ENST00000495554 KAZALD1Q96I82 304 aa17.99■□□□□ 0.47
CHTOP-206ENST00000495554 ISY1Q9ULR0 285 aaKnown RBP17.99■□□□□ 0.47
CHTOP-206ENST00000495554 UTYO14607 1347 aa17.99■□□□□ 0.47
CHTOP-206ENST00000495554 CYP2E1P05181 493 aaPredicted RBP17.98■□□□□ 0.47
CHTOP-206ENST00000495554 COPS6Q7L5N1 327 aa17.98■□□□□ 0.47
CHTOP-206ENST00000495554 TTC5Q8N0Z6 440 aa17.98■□□□□ 0.47
CHTOP-206ENST00000495554 XAGE3Q8WTP9 111 aa17.98■□□□□ 0.47
CHTOP-206ENST00000495554 USP42Q9H9J4 1324 aaKnown RBP17.98■□□□□ 0.47
CHTOP-206ENST00000495554 BAG4O95429 457 aaKnown RBP17.97■□□□□ 0.47
CHTOP-206ENST00000495554 OS9Q13438 667 aaPredicted RBP17.97■□□□□ 0.47
CHTOP-206ENST00000495554 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
CHTOP-206ENST00000495554 CARD10Q9BWT7 1032 aa17.97■□□□□ 0.47
CHTOP-206ENST00000495554 CNTROBQ8N137 903 aa17.97■□□□□ 0.47
CHTOP-206ENST00000495554 TTC41PQ6P2S7 1318 aa17.97■□□□□ 0.47
CHTOP-206ENST00000495554 GRM8O00222 908 aa17.96■□□□□ 0.47
CHTOP-206ENST00000495554 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
CHTOP-206ENST00000495554 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
CHTOP-206ENST00000495554 PAXIP1Q6ZW49 1069 aaPredicted RBP17.96■□□□□ 0.47
CHTOP-206ENST00000495554 RIC3Q7Z5B4 369 aa17.96■□□□□ 0.47
CHTOP-206ENST00000495554 CLASRPQ8N2M8 674 aaKnown RBP17.96■□□□□ 0.47
CHTOP-206ENST00000495554 ABCA3Q99758 1704 aa17.96■□□□□ 0.47
CHTOP-206ENST00000495554 XRCC6P12956 609 aaKnown RBP eCLIP17.96■□□□□ 0.47
CHTOP-206ENST00000495554 ERC1Q8IUD2 1116 aa17.96■□□□□ 0.47
CHTOP-206ENST00000495554 SUCLG2Q96I99 432 aa17.96■□□□□ 0.47
CHTOP-206ENST00000495554 PALD1Q9ULE6 856 aa17.96■□□□□ 0.47
CHTOP-206ENST00000495554 NKX1-1Q15270 411 aaPredicted RBP17.95■□□□□ 0.46
CHTOP-206ENST00000495554 PCDH11XQ9BZA7 1347 aa17.95■□□□□ 0.46
CHTOP-206ENST00000495554 PCDH11YQ9BZA8 1340 aa17.95■□□□□ 0.46
CHTOP-206ENST00000495554 MRE11P49959 708 aa17.95■□□□□ 0.46
CHTOP-206ENST00000495554 ZGPATQ8N5A5 531 aaKnown RBP17.95■□□□□ 0.46
CHTOP-206ENST00000495554 GLI3P10071 1580 aa17.95■□□□□ 0.46
CHTOP-206ENST00000495554 GLRX3O76003 335 aaKnown RBP17.94■□□□□ 0.46
CHTOP-206ENST00000495554 IL2RBP14784 551 aa17.94■□□□□ 0.46
CHTOP-206ENST00000495554 TMX3Q96JJ7 454 aa17.94■□□□□ 0.46
CHTOP-206ENST00000495554 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
CHTOP-206ENST00000495554 ANKRD13DQ6ZTN6 518 aa17.94■□□□□ 0.46
CHTOP-206ENST00000495554 METTL22Q9BUU2 404 aaPredicted RBP17.94■□□□□ 0.46
CHTOP-206ENST00000495554 STRN4Q9NRL3 753 aa17.94■□□□□ 0.46
CHTOP-206ENST00000495554 PARP4Q9UKK3 1724 aaKnown RBP17.94■□□□□ 0.46
CHTOP-206ENST00000495554 NEURL1BA8MQ27 555 aa17.93■□□□□ 0.46
CHTOP-206ENST00000495554 SGSM2O43147 1006 aa17.93■□□□□ 0.46
CHTOP-206ENST00000495554 MAP4K4O95819 1239 aaPredicted RBP17.93■□□□□ 0.46
CHTOP-206ENST00000495554 HSPA4P34932 840 aa17.93■□□□□ 0.46
CHTOP-206ENST00000495554 PA2G4Q9UQ80 394 aaKnown RBP17.93■□□□□ 0.46
CHTOP-206ENST00000495554 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
CHTOP-206ENST00000495554 IL25Q9H293 177 aa17.93■□□□□ 0.46
CHTOP-206ENST00000495554 SAMD1Q6SPF0 538 aaPredicted RBP17.92■□□□□ 0.46
CHTOP-206ENST00000495554 GPATCH3Q96I76 525 aa17.92■□□□□ 0.46
CHTOP-206ENST00000495554 BICC1Q9H694 974 aaKnown RBP17.92■□□□□ 0.46
CHTOP-206ENST00000495554 NEXNQ0ZGT2 675 aa17.92■□□□□ 0.46
CHTOP-206ENST00000495554 PKP1Q13835 747 aa17.92■□□□□ 0.46
CHTOP-206ENST00000495554 GCKRQ14397 625 aa17.92■□□□□ 0.46
CHTOP-206ENST00000495554 MYD88Q99836 296 aa17.92■□□□□ 0.46
CHTOP-206ENST00000495554 CUL4AQ13619 759 aa17.91■□□□□ 0.46
CHTOP-206ENST00000495554 KLHL40Q2TBA0 621 aa17.91■□□□□ 0.46
CHTOP-206ENST00000495554 ECHDC1Q9NTX5 307 aa17.91■□□□□ 0.46
CHTOP-206ENST00000495554 RAD50Q92878 1312 aa17.91■□□□□ 0.46
CHTOP-206ENST00000495554 EVA1CP58658 441 aa17.91■□□□□ 0.46
CHTOP-206ENST00000495554 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
CHTOP-206ENST00000495554 NBPF26B4DH59 902 aa17.9■□□□□ 0.46
CHTOP-206ENST00000495554 IFIT2P09913 472 aaKnown RBP17.9■□□□□ 0.46
CHTOP-206ENST00000495554 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
CHTOP-206ENST00000495554 NBPF10Q6P3W6 841 aaKnown RBP17.9■□□□□ 0.46
CHTOP-206ENST00000495554 NBPF15Q8N660 670 aa17.9■□□□□ 0.46
CHTOP-206ENST00000495554 INTS4Q96HW7 963 aaKnown RBP17.9■□□□□ 0.46
CHTOP-206ENST00000495554 GRPEL1Q9HAV7 217 aa17.9■□□□□ 0.46
CHTOP-206ENST00000495554 DDX49Q9Y6V7 483 aaKnown RBP17.9■□□□□ 0.46
CHTOP-206ENST00000495554 EPHA10Q5JZY3 1008 aa17.89■□□□□ 0.46
CHTOP-206ENST00000495554 MCTP1Q6DN14 999 aa17.89■□□□□ 0.46
CHTOP-206ENST00000495554 KIAA1211Q6ZU35 1233 aa17.89■□□□□ 0.46
CHTOP-206ENST00000495554 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.89■□□□□ 0.46
CHTOP-206ENST00000495554 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms