RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 BICDL1Q6ZP65 573 aa17.57■□□□□ 0.4
FDPS-219ENST00000495308 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
FDPS-219ENST00000495308 PARP3Q9Y6F1 533 aa17.57■□□□□ 0.4
FDPS-219ENST00000495308 ARFGEF2Q9Y6D5 1785 aa17.57■□□□□ 0.4
FDPS-219ENST00000495308 POLRMTO00411 1230 aaKnown RBP17.56■□□□□ 0.4
FDPS-219ENST00000495308 EXOSC9Q06265 439 aaKnown RBP17.56■□□□□ 0.4
FDPS-219ENST00000495308 GOLGA2Q08379 1002 aa17.56■□□□□ 0.4
FDPS-219ENST00000495308 TWISTNBQ3B726 338 aaPredicted RBP17.56■□□□□ 0.4
FDPS-219ENST00000495308 ZBTB3Q9H5J0 574 aa17.56■□□□□ 0.4
FDPS-219ENST00000495308 MYH16Q9H6N6 1097 aa17.56■□□□□ 0.4
FDPS-219ENST00000495308 MAP3K15Q6ZN16 1313 aa17.55■□□□□ 0.4
FDPS-219ENST00000495308 HLFQ16534 295 aa17.55■□□□□ 0.4
FDPS-219ENST00000495308 KIF6Q6ZMV9 814 aa17.55■□□□□ 0.4
FDPS-219ENST00000495308 NLGN2Q8NFZ4 835 aa17.55■□□□□ 0.4
FDPS-219ENST00000495308 XAGE3Q8WTP9 111 aa17.55■□□□□ 0.4
FDPS-219ENST00000495308 SYT17Q9BSW7 474 aa17.55■□□□□ 0.4
FDPS-219ENST00000495308 DBF4Q9UBU7 674 aaPredicted RBP17.55■□□□□ 0.4
FDPS-219ENST00000495308 CACNA1FO60840 1977 aa17.55■□□□□ 0.4
FDPS-219ENST00000495308 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
FDPS-219ENST00000495308 ANKRD31Q8N7Z5 1873 aa17.54■□□□□ 0.4
FDPS-219ENST00000495308 AIMP1Q12904 312 aaKnown RBP17.54■□□□□ 0.4
FDPS-219ENST00000495308 COPS6Q7L5N1 327 aa17.54■□□□□ 0.4
FDPS-219ENST00000495308 CDCA7LQ96GN5 454 aa17.54■□□□□ 0.4
FDPS-219ENST00000495308 TCERG1O14776 1098 aaKnown RBP17.53■□□□□ 0.4
FDPS-219ENST00000495308 HNRNPUQ00839 825 aaKnown RBP eCLIP17.53■□□□□ 0.43e-6■■■□□ 17.5
FDPS-219ENST00000495308 ZNF652Q9Y2D9 606 aa17.53■□□□□ 0.4
FDPS-219ENST00000495308 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
FDPS-219ENST00000495308 CLEC4GQ6UXB4 293 aa17.52■□□□□ 0.4
FDPS-219ENST00000495308 ERVV-1B6SEH8 477 aa17.51■□□□□ 0.39
FDPS-219ENST00000495308 E9PSI1 815 aa17.51■□□□□ 0.39
FDPS-219ENST00000495308 SERPINB2P05120 415 aa17.51■□□□□ 0.39
FDPS-219ENST00000495308 BRCA1P38398 1863 aaKnown RBP17.51■□□□□ 0.39
FDPS-219ENST00000495308 SLFN5Q08AF3 891 aa17.51■□□□□ 0.39
FDPS-219ENST00000495308 CCDC30Q5VVM6 783 aa17.51■□□□□ 0.39
FDPS-219ENST00000495308 PHAXQ9H814 394 aaKnown RBP17.51■□□□□ 0.39
FDPS-219ENST00000495308 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
FDPS-219ENST00000495308 CD2APQ9Y5K6 639 aa17.51■□□□□ 0.39
FDPS-219ENST00000495308 VAMP4O75379 141 aa17.5■□□□□ 0.39
FDPS-219ENST00000495308 SETDB2Q96T68 719 aa17.5■□□□□ 0.39
FDPS-219ENST00000495308 NIP7Q9Y221 180 aaKnown RBP eCLIP17.5■□□□□ 0.39
FDPS-219ENST00000495308 DLEC1Q9Y238 1755 aa17.5■□□□□ 0.39
FDPS-219ENST00000495308 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
FDPS-219ENST00000495308 ATP10DQ9P241 1426 aa17.49■□□□□ 0.39
FDPS-219ENST00000495308 FAM177BA6PVY3 158 aa17.49■□□□□ 0.39
FDPS-219ENST00000495308 GPTP24298 496 aa17.49■□□□□ 0.39
FDPS-219ENST00000495308 GIGYF2Q6Y7W6 1299 aaKnown RBP17.49■□□□□ 0.39
FDPS-219ENST00000495308 CCDC24Q8N4L8 307 aa17.49■□□□□ 0.39
FDPS-219ENST00000495308 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
FDPS-219ENST00000495308 PXDNLA1KZ92 1463 aa17.49■□□□□ 0.39
FDPS-219ENST00000495308 CACNA1SQ13698 1873 aa17.48■□□□□ 0.39
FDPS-219ENST00000495308 RGL2O15211 777 aa17.48■□□□□ 0.39
FDPS-219ENST00000495308 UBN2Q6ZU65 1347 aa17.47■□□□□ 0.39
FDPS-219ENST00000495308 PRR5LQ6MZQ0 368 aa17.47■□□□□ 0.39
FDPS-219ENST00000495308 CHMP4AQ9BY43 222 aa17.47■□□□□ 0.39
FDPS-219ENST00000495308 TNRC6CQ9HCJ0 1690 aaKnown RBP17.47■□□□□ 0.39
FDPS-219ENST00000495308 ANKRD13DQ6ZTN6 518 aa17.46■□□□□ 0.39
FDPS-219ENST00000495308 G2E3Q7L622 706 aa17.46■□□□□ 0.39
FDPS-219ENST00000495308 NBPF5PQ86XG9 351 aaPredicted RBP17.46■□□□□ 0.39
FDPS-219ENST00000495308 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
FDPS-219ENST00000495308 CNBD1Q8NA66 436 aa17.46■□□□□ 0.39
FDPS-219ENST00000495308 WWC3Q9ULE0 1092 aa17.46■□□□□ 0.39
FDPS-219ENST00000495308 NPHP1O15259 732 aa17.45■□□□□ 0.38
FDPS-219ENST00000495308 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
FDPS-219ENST00000495308 ZNF34Q8IZ26 560 aa17.45■□□□□ 0.38
FDPS-219ENST00000495308 PLBD2Q8NHP8 589 aa17.45■□□□□ 0.38
FDPS-219ENST00000495308 LAMB2P55268 1798 aa17.44■□□□□ 0.38
FDPS-219ENST00000495308 A0A0G2JLW4 131 aa17.44■□□□□ 0.38
FDPS-219ENST00000495308 RIC3Q7Z5B4 369 aa17.44■□□□□ 0.38
FDPS-219ENST00000495308 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
FDPS-219ENST00000495308 ZNF428Q96B54 188 aa17.44■□□□□ 0.38
FDPS-219ENST00000495308 DPEP1P16444 411 aa17.43■□□□□ 0.38
FDPS-219ENST00000495308 CHRNA5P30532 468 aa17.43■□□□□ 0.38
FDPS-219ENST00000495308 ARFGEF1Q9Y6D6 1849 aa17.42■□□□□ 0.38
FDPS-219ENST00000495308 DDX60Q8IY21 1712 aaKnown RBP17.42■□□□□ 0.38
FDPS-219ENST00000495308 TGFB2P61812 414 aa17.42■□□□□ 0.38
FDPS-219ENST00000495308 ST5P78524 1137 aa17.42■□□□□ 0.38
FDPS-219ENST00000495308 TCIRG1Q13488 830 aa17.42■□□□□ 0.38
FDPS-219ENST00000495308 HSP90AB3PQ58FF7 597 aa17.42■□□□□ 0.38
FDPS-219ENST00000495308 SUSD4Q5VX71 490 aa17.42■□□□□ 0.38
FDPS-219ENST00000495308 NUTM1Q86Y26 1132 aa17.42■□□□□ 0.38
FDPS-219ENST00000495308 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
FDPS-219ENST00000495308 ADCY9O60503 1353 aa17.41■□□□□ 0.38
FDPS-219ENST00000495308 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
FDPS-219ENST00000495308 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
FDPS-219ENST00000495308 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
FDPS-219ENST00000495308 FLIIQ13045 1269 aa17.41■□□□□ 0.38
FDPS-219ENST00000495308 TPTE2Q6XPS3 522 aa17.41■□□□□ 0.38
FDPS-219ENST00000495308 IBTKQ9P2D0 1353 aaPredicted RBP17.4■□□□□ 0.38
FDPS-219ENST00000495308 PI4KAP2A4QPH2 592 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 NTSR2O95665 410 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 YBX3P16989 372 aaKnown RBP eCLIP17.4■□□□□ 0.38
FDPS-219ENST00000495308 KCNA3P22001 575 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 GTF2E1P29083 439 aaPredicted RBP17.4■□□□□ 0.38
FDPS-219ENST00000495308 GPR162Q16538 588 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 ERFEQ4G0M1 354 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 PARP10Q53GL7 1025 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 NLRP10Q86W26 655 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 PI4KAP1Q8N8J0 262 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 MYD88Q99836 296 aa17.4■□□□□ 0.38
FDPS-219ENST00000495308 BRIP1Q9BX63 1249 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms