RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 PRPF40BQ6NWY9 871 aaKnown RBP12.72□□□□□ -0.37
GARNL3-219ENST00000495172 COLQQ9Y215 455 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-219ENST00000495172 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
GARNL3-219ENST00000495172 COL4A5P29400 1685 aa12.71□□□□□ -0.37
GARNL3-219ENST00000495172 TRPA1O75762 1119 aa12.71□□□□□ -0.37
GARNL3-219ENST00000495172 UNC80Q8N2C7 3258 aa12.71□□□□□ -0.38
GARNL3-219ENST00000495172 INSRP06213 1382 aa12.7□□□□□ -0.38
GARNL3-219ENST00000495172 CTU1Q7Z7A3 348 aaKnown RBP12.7□□□□□ -0.38
GARNL3-219ENST00000495172 IFNL2Q8IZJ0 200 aa12.7□□□□□ -0.38
GARNL3-219ENST00000495172 GLIS2Q9BZE0 524 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-219ENST00000495172 GGNBP2Q9H3C7 697 aa12.7□□□□□ -0.38
GARNL3-219ENST00000495172 SOS1Q07889 1333 aaPredicted RBP12.69□□□□□ -0.38
GARNL3-219ENST00000495172 DNAJC10Q8IXB1 793 aa12.69□□□□□ -0.38
GARNL3-219ENST00000495172 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
GARNL3-219ENST00000495172 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
GARNL3-219ENST00000495172 EMILIN1Q9Y6C2 1016 aa12.68□□□□□ -0.38
GARNL3-219ENST00000495172 SCNN1DP51172 638 aa12.67□□□□□ -0.38
GARNL3-219ENST00000495172 TBC1D9BQ66K14 1250 aa12.67□□□□□ -0.38
GARNL3-219ENST00000495172 PRR5LQ6MZQ0 368 aa12.67□□□□□ -0.38
GARNL3-219ENST00000495172 SLC51AQ86UW1 340 aa12.67□□□□□ -0.38
GARNL3-219ENST00000495172 NARFQ9UHQ1 456 aa12.67□□□□□ -0.38
GARNL3-219ENST00000495172 ARFGEF2Q9Y6D5 1785 aa12.66□□□□□ -0.38
GARNL3-219ENST00000495172 NCAPD2Q15021 1401 aa12.66□□□□□ -0.38
GARNL3-219ENST00000495172 POTEFA5A3E0 1075 aa12.66□□□□□ -0.38
GARNL3-219ENST00000495172 FZD9O00144 591 aa12.66□□□□□ -0.38
GARNL3-219ENST00000495172 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
GARNL3-219ENST00000495172 COL15A1P39059 1388 aa12.66□□□□□ -0.38
GARNL3-219ENST00000495172 FAM155AB1AL88 458 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-219ENST00000495172 CABP4P57796 275 aa12.65□□□□□ -0.38
GARNL3-219ENST00000495172 KIF23Q02241 960 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-219ENST00000495172 GPC2Q8N158 579 aa12.65□□□□□ -0.38
GARNL3-219ENST00000495172 EYA1Q99502 592 aa12.65□□□□□ -0.38
GARNL3-219ENST00000495172 BRIP1Q9BX63 1249 aa12.65□□□□□ -0.38
GARNL3-219ENST00000495172 ZBTB1Q9Y2K1 713 aa12.65□□□□□ -0.38
GARNL3-219ENST00000495172 FLT4P35916 1363 aa12.65□□□□□ -0.38
GARNL3-219ENST00000495172 AKAP11Q9UKA4 1901 aa12.64□□□□□ -0.39
GARNL3-219ENST00000495172 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
GARNL3-219ENST00000495172 PDE6BP35913 854 aa12.64□□□□□ -0.39
GARNL3-219ENST00000495172 FKBP4Q02790 459 aaKnown RBP eCLIP12.64□□□□□ -0.39
GARNL3-219ENST00000495172 NOGQ13253 232 aa12.64□□□□□ -0.39
GARNL3-219ENST00000495172 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
GARNL3-219ENST00000495172 ERVV-2B6SEH9 535 aa12.63□□□□□ -0.39
GARNL3-219ENST00000495172 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
GARNL3-219ENST00000495172 SRGNP10124 158 aa12.63□□□□□ -0.39
GARNL3-219ENST00000495172 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
GARNL3-219ENST00000495172 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
GARNL3-219ENST00000495172 NFATC2IPQ8NCF5 419 aa12.63□□□□□ -0.39
GARNL3-219ENST00000495172 ROCK2O75116 1388 aaKnown RBP12.63□□□□□ -0.39
GARNL3-219ENST00000495172 FYB1O15117 783 aa12.62□□□□□ -0.39
GARNL3-219ENST00000495172 CYP19A1P11511 503 aaPredicted RBP12.62□□□□□ -0.39
GARNL3-219ENST00000495172 LMOD1P29536 600 aaPredicted RBP12.62□□□□□ -0.39
GARNL3-219ENST00000495172 HUNKP57058 714 aa12.62□□□□□ -0.39
GARNL3-219ENST00000495172 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
GARNL3-219ENST00000495172 VCANP13611 3396 aa12.62□□□□□ -0.39
GARNL3-219ENST00000495172 PAPPA2Q9BXP8 1791 aa12.61□□□□□ -0.39
GARNL3-219ENST00000495172 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
GARNL3-219ENST00000495172 STYK1Q6J9G0 422 aa12.61□□□□□ -0.39
GARNL3-219ENST00000495172 HHIPL1Q96JK4 782 aa12.61□□□□□ -0.39
GARNL3-219ENST00000495172 RNF39Q9H2S5 420 aa12.61□□□□□ -0.39
GARNL3-219ENST00000495172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.61□□□□□ -0.398e-9■■■■■ 33.7
GARNL3-219ENST00000495172 PITPNM2Q9BZ72 1349 aa12.61□□□□□ -0.39
GARNL3-219ENST00000495172 CANXP27824 592 aaKnown RBP12.6□□□□□ -0.39
GARNL3-219ENST00000495172 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
GARNL3-219ENST00000495172 SAGE1Q9NXZ1 904 aa12.6□□□□□ -0.39
GARNL3-219ENST00000495172 LAMA3Q16787 3333 aa12.6□□□□□ -0.39
GARNL3-219ENST00000495172 KIAA0100Q14667 2235 aaKnown RBP12.6□□□□□ -0.39
GARNL3-219ENST00000495172 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-219ENST00000495172 MASTLQ96GX5 879 aa12.59□□□□□ -0.39
GARNL3-219ENST00000495172 CSRNP1Q96S65 589 aa12.59□□□□□ -0.39
GARNL3-219ENST00000495172 SHTN1A0MZ66 631 aa12.58□□□□□ -0.4
GARNL3-219ENST00000495172 SLC39A6Q13433 755 aa12.58□□□□□ -0.4
GARNL3-219ENST00000495172 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
GARNL3-219ENST00000495172 ZNF296Q8WUU4 475 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-219ENST00000495172 L3MBTL2Q969R5 705 aa12.58□□□□□ -0.4
GARNL3-219ENST00000495172 ANKRD26Q9UPS8 1709 aa12.58□□□□□ -0.4
GARNL3-219ENST00000495172 TBC1D8O95759 1140 aa12.57□□□□□ -0.4
GARNL3-219ENST00000495172 HIRAP54198 1017 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-219ENST00000495172 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
GARNL3-219ENST00000495172 ZNF530Q6P9A1 599 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-219ENST00000495172 HDAC9Q9UKV0 1011 aa12.57□□□□□ -0.4
GARNL3-219ENST00000495172 TBC1D2BQ9UPU7 963 aa12.57□□□□□ -0.4
GARNL3-219ENST00000495172 NPHP1O15259 732 aa12.56□□□□□ -0.4
GARNL3-219ENST00000495172 EN2P19622 333 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-219ENST00000495172 RGMBQ6NW40 437 aa12.56□□□□□ -0.4
GARNL3-219ENST00000495172 USP48Q86UV5 1035 aa12.56□□□□□ -0.4
GARNL3-219ENST00000495172 CNBD1Q8NA66 436 aa12.56□□□□□ -0.4
GARNL3-219ENST00000495172 OTUD5Q96G74 571 aa12.56□□□□□ -0.4
GARNL3-219ENST00000495172 SPTBN5Q9NRC6 3674 aaKnown RBP12.55□□□□□ -0.4
GARNL3-219ENST00000495172 SCN7AQ01118 1682 aa12.55□□□□□ -0.4
GARNL3-219ENST00000495172 H0YGN5 161 aa12.55□□□□□ -0.4
GARNL3-219ENST00000495172 ZNF157P51786 506 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-219ENST00000495172 CHRDL2Q6WN34 429 aa12.55□□□□□ -0.4
GARNL3-219ENST00000495172 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
GARNL3-219ENST00000495172 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
GARNL3-219ENST00000495172 ZNF330Q9Y3S2 320 aaPredicted RBP12.55□□□□□ -0.4
GARNL3-219ENST00000495172 KIF20BQ96Q89 1820 aa12.55□□□□□ -0.4
GARNL3-219ENST00000495172 ST20-MTHFSA0A0A6YYL1 179 aa12.54□□□□□ -0.4
GARNL3-219ENST00000495172 MTHFSP49914 203 aa12.54□□□□□ -0.4
GARNL3-219ENST00000495172 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
GARNL3-219ENST00000495172 ADARB2Q9NS39 739 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms