RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
CHMP2B-205ENST00000494980 PPM1GO15355 546 aaPredicted RBP20.44■□□□□ 0.86
CHMP2B-205ENST00000494980 DNAJC10Q8IXB1 793 aa20.44■□□□□ 0.86
CHMP2B-205ENST00000494980 BCORQ6W2J9 1755 aa20.44■□□□□ 0.86
CHMP2B-205ENST00000494980 GPC2Q8N158 579 aa20.43■□□□□ 0.86
CHMP2B-205ENST00000494980 CCDC93Q567U6 631 aa20.42■□□□□ 0.86
CHMP2B-205ENST00000494980 STYK1Q6J9G0 422 aa20.42■□□□□ 0.86
CHMP2B-205ENST00000494980 PRR5LQ6MZQ0 368 aa20.42■□□□□ 0.86
CHMP2B-205ENST00000494980 FXR1P51114 621 aaKnown RBP eCLIP20.41■□□□□ 0.86
CHMP2B-205ENST00000494980 ZIC5Q96T25 663 aa20.41■□□□□ 0.86
CHMP2B-205ENST00000494980 SCN7AQ01118 1682 aa20.41■□□□□ 0.86
CHMP2B-205ENST00000494980 DLL1O00548 723 aa20.4■□□□□ 0.86
CHMP2B-205ENST00000494980 FKBP4Q02790 459 aaKnown RBP eCLIP20.4■□□□□ 0.86
CHMP2B-205ENST00000494980 NFATC2IPQ8NCF5 419 aa20.4■□□□□ 0.86
CHMP2B-205ENST00000494980 SCN11AQ9UI33 1791 aa20.4■□□□□ 0.86
CHMP2B-205ENST00000494980 ZBTB1Q9Y2K1 713 aa20.4■□□□□ 0.86
CHMP2B-205ENST00000494980 FZD9O00144 591 aa20.39■□□□□ 0.85
CHMP2B-205ENST00000494980 CELF2O95319 508 aaKnown RBP20.39■□□□□ 0.85
CHMP2B-205ENST00000494980 LMOD1P29536 600 aaPredicted RBP20.39■□□□□ 0.85
CHMP2B-205ENST00000494980 HHIPL1Q96JK4 782 aa20.39■□□□□ 0.85
CHMP2B-205ENST00000494980 CARD11Q9BXL7 1154 aa20.39■□□□□ 0.85
CHMP2B-205ENST00000494980 AKAP11Q9UKA4 1901 aa20.39■□□□□ 0.85
CHMP2B-205ENST00000494980 SRGNP10124 158 aa20.38■□□□□ 0.85
CHMP2B-205ENST00000494980 CYP19A1P11511 503 aaPredicted RBP20.38■□□□□ 0.85
CHMP2B-205ENST00000494980 TBC1D9BQ66K14 1250 aa20.38■□□□□ 0.85
CHMP2B-205ENST00000494980 ZNF530Q6P9A1 599 aaPredicted RBP20.38■□□□□ 0.85
CHMP2B-205ENST00000494980 C7orf43Q8WVR3 580 aa20.38■□□□□ 0.85
CHMP2B-205ENST00000494980 TRIOBPQ9H2D6 2365 aa20.38■□□□□ 0.85
CHMP2B-205ENST00000494980 WASHC2AQ641Q2 1341 aa20.37■□□□□ 0.85
CHMP2B-205ENST00000494980 MASTLQ96GX5 879 aa20.37■□□□□ 0.85
CHMP2B-205ENST00000494980 GJA3Q9Y6H8 435 aa20.37■□□□□ 0.85
CHMP2B-205ENST00000494980 CEP290O15078 2479 aa20.36■□□□□ 0.85
CHMP2B-205ENST00000494980 EPS15P42566 896 aa20.36■□□□□ 0.85
CHMP2B-205ENST00000494980 NOGQ13253 232 aa20.36■□□□□ 0.85
CHMP2B-205ENST00000494980 HPS5Q9UPZ3 1129 aa20.36■□□□□ 0.85
CHMP2B-205ENST00000494980 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
CHMP2B-205ENST00000494980 MTHFSP49914 203 aa20.35■□□□□ 0.85
CHMP2B-205ENST00000494980 OLFM4Q6UX06 510 aa20.35■□□□□ 0.85
CHMP2B-205ENST00000494980 CTU1Q7Z7A3 348 aaKnown RBP20.35■□□□□ 0.85
CHMP2B-205ENST00000494980 IARSP41252 1262 aaKnown RBP20.34■□□□□ 0.85
CHMP2B-205ENST00000494980 SCNN1DP51172 638 aa20.34■□□□□ 0.85
CHMP2B-205ENST00000494980 COL4A5P29400 1685 aa20.33■□□□□ 0.85
CHMP2B-205ENST00000494980 NPHP1O15259 732 aa20.33■□□□□ 0.85
CHMP2B-205ENST00000494980 USP50Q70EL3 339 aaPredicted RBP20.33■□□□□ 0.85
CHMP2B-205ENST00000494980 CNBD1Q8NA66 436 aa20.33■□□□□ 0.85
CHMP2B-205ENST00000494980 SAGE1Q9NXZ1 904 aa20.33■□□□□ 0.85
CHMP2B-205ENST00000494980 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
CHMP2B-205ENST00000494980 ZNF408Q9H9D4 720 aa20.32■□□□□ 0.84
CHMP2B-205ENST00000494980 CANXP27824 592 aaKnown RBP20.31■□□□□ 0.84
CHMP2B-205ENST00000494980 COL6A3P12111 3177 aa20.3■□□□□ 0.84
CHMP2B-205ENST00000494980 EIF6P56537 245 aaKnown RBP20.3■□□□□ 0.84
CHMP2B-205ENST00000494980 ST5P78524 1137 aa20.3■□□□□ 0.84
CHMP2B-205ENST00000494980 JDP2Q8WYK2 163 aa20.3■□□□□ 0.84
CHMP2B-205ENST00000494980 GLIS2Q9BZE0 524 aaPredicted RBP20.3■□□□□ 0.84
CHMP2B-205ENST00000494980 TRPA1O75762 1119 aa20.29■□□□□ 0.84
CHMP2B-205ENST00000494980 EIF4A2Q14240 407 aaKnown RBP20.29■□□□□ 0.84
CHMP2B-205ENST00000494980 AKAP4Q5JQC9 854 aa20.29■□□□□ 0.84
CHMP2B-205ENST00000494980 C1orf141Q5JVX7 400 aa20.29■□□□□ 0.84
CHMP2B-205ENST00000494980 RTKN2Q8IZC4 609 aa20.29■□□□□ 0.84
CHMP2B-205ENST00000494980 SYNE4Q8N205 404 aa20.29■□□□□ 0.84
CHMP2B-205ENST00000494980 TESK2Q96S53 571 aa20.28■□□□□ 0.84
CHMP2B-205ENST00000494980 RNF186Q9NXI6 227 aa20.27■□□□□ 0.84
CHMP2B-205ENST00000494980 CENPFP49454 3210 aa20.27■□□□□ 0.84
CHMP2B-205ENST00000494980 HTTP42858 3142 aa20.27■□□□□ 0.84
CHMP2B-205ENST00000494980 AMOTQ4VCS5 1084 aa20.26■□□□□ 0.83
CHMP2B-205ENST00000494980 A0A087WZG4 1122 aa20.25■□□□□ 0.83
CHMP2B-205ENST00000494980 NPR1P16066 1061 aa20.25■□□□□ 0.83
CHMP2B-205ENST00000494980 EIF5P55010 431 aaKnown RBP20.25■□□□□ 0.83
CHMP2B-205ENST00000494980 HUNKP57058 714 aa20.25■□□□□ 0.83
CHMP2B-205ENST00000494980 BRCA2P51587 3418 aa20.24■□□□□ 0.83
CHMP2B-205ENST00000494980 SLC39A6Q13433 755 aa20.24■□□□□ 0.83
CHMP2B-205ENST00000494980 SETDB2Q96T68 719 aa20.24■□□□□ 0.83
CHMP2B-205ENST00000494980 FAM155AB1AL88 458 aaPredicted RBP20.23■□□□□ 0.83
CHMP2B-205ENST00000494980 SIN3AQ96ST3 1273 aa20.23■□□□□ 0.83
CHMP2B-205ENST00000494980 ADARB2Q9NS39 739 aaKnown RBP20.23■□□□□ 0.83
CHMP2B-205ENST00000494980 UBR2Q8IWV8 1755 aa20.23■□□□□ 0.83
CHMP2B-205ENST00000494980 SNED1Q8TER0 1413 aa20.22■□□□□ 0.83
CHMP2B-205ENST00000494980 KIF23Q02241 960 aaPredicted RBP20.22■□□□□ 0.83
CHMP2B-205ENST00000494980 SLC17A8Q8NDX2 589 aa20.22■□□□□ 0.83
CHMP2B-205ENST00000494980 TBC1D2BQ9UPU7 963 aa20.22■□□□□ 0.83
CHMP2B-205ENST00000494980 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
CHMP2B-205ENST00000494980 RANBP2P49792 3224 aaKnown RBP20.22■□□□□ 0.83
CHMP2B-205ENST00000494980 KIAA0100Q14667 2235 aaKnown RBP20.21■□□□□ 0.83
CHMP2B-205ENST00000494980 PKN2Q16513 984 aaKnown RBP20.21■□□□□ 0.83
CHMP2B-205ENST00000494980 POLKQ9UBT6 870 aa20.21■□□□□ 0.83
CHMP2B-205ENST00000494980 MRC1P22897 1456 aa20.2■□□□□ 0.82
CHMP2B-205ENST00000494980 PSMD1Q99460 953 aa20.2■□□□□ 0.82
CHMP2B-205ENST00000494980 RGMBQ6NW40 437 aa20.19■□□□□ 0.82
CHMP2B-205ENST00000494980 SLC52A2Q9HAB3 445 aa20.19■□□□□ 0.82
CHMP2B-205ENST00000494980 GPRC5DQ9NZD1 345 aa20.19■□□□□ 0.82
CHMP2B-205ENST00000494980 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
CHMP2B-205ENST00000494980 VSIG10Q8N0Z9 540 aa20.17■□□□□ 0.82
CHMP2B-205ENST00000494980 LARGE2Q8N3Y3 721 aa20.17■□□□□ 0.82
CHMP2B-205ENST00000494980 NBPF5PQ86XG9 351 aaPredicted RBP20.16■□□□□ 0.82
CHMP2B-205ENST00000494980 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
CHMP2B-205ENST00000494980 HDAC9Q9UKV0 1011 aa20.16■□□□□ 0.82
CHMP2B-205ENST00000494980 COLQQ9Y215 455 aaPredicted RBP20.16■□□□□ 0.82
CHMP2B-205ENST00000494980 STARD3NLO95772 234 aa20.15■□□□□ 0.82
CHMP2B-205ENST00000494980 CCDC102AQ96A19 550 aa20.15■□□□□ 0.82
CHMP2B-205ENST00000494980 CARD14Q9BXL6 1004 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 140.2 ms