RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 LRP10Q7Z4F1 713 aa20.98■□□□□ 0.95
YIF1A-209ENST00000494836 CHMP4AQ9BY43 222 aa20.98■□□□□ 0.95
YIF1A-209ENST00000494836 SPINK5Q9NQ38 1064 aaPredicted RBP20.98■□□□□ 0.95
YIF1A-209ENST00000494836 DBF4Q9UBU7 674 aaPredicted RBP20.98■□□□□ 0.95
YIF1A-209ENST00000494836 C10orf71Q711Q0 1435 aa20.97■□□□□ 0.95
YIF1A-209ENST00000494836 TSPYL6Q8N831 410 aa20.97■□□□□ 0.95
YIF1A-209ENST00000494836 MAP3K15Q6ZN16 1313 aa20.97■□□□□ 0.95
YIF1A-209ENST00000494836 ERVV-1B6SEH8 477 aa20.96■□□□□ 0.95
YIF1A-209ENST00000494836 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
YIF1A-209ENST00000494836 CARMIL3Q8ND23 1372 aa20.96■□□□□ 0.95
YIF1A-209ENST00000494836 KIF13BQ9NQT8 1826 aa20.95■□□□□ 0.94
YIF1A-209ENST00000494836 NLGN2Q8NFZ4 835 aa20.95■□□□□ 0.94
YIF1A-209ENST00000494836 SETDB2Q96T68 719 aa20.95■□□□□ 0.94
YIF1A-209ENST00000494836 ZBTB3Q9H5J0 574 aa20.95■□□□□ 0.94
YIF1A-209ENST00000494836 AFDNP55196 1824 aaKnown RBP20.94■□□□□ 0.94
YIF1A-209ENST00000494836 SERPINB2P05120 415 aa20.94■□□□□ 0.94
YIF1A-209ENST00000494836 HLFQ16534 295 aa20.94■□□□□ 0.94
YIF1A-209ENST00000494836 CCDC30Q5VVM6 783 aa20.94■□□□□ 0.94
YIF1A-209ENST00000494836 COPS6Q7L5N1 327 aa20.94■□□□□ 0.94
YIF1A-209ENST00000494836 XAGE3Q8WTP9 111 aa20.94■□□□□ 0.94
YIF1A-209ENST00000494836 HYPKQ9NX55 129 aa20.94■□□□□ 0.94
YIF1A-209ENST00000494836 NRXN2Q9P2S2 1712 aa20.94■□□□□ 0.94
YIF1A-209ENST00000494836 E9PSI1 815 aa20.93■□□□□ 0.94
YIF1A-209ENST00000494836 EXOSC9Q06265 439 aaKnown RBP20.93■□□□□ 0.94
YIF1A-209ENST00000494836 AIMP1Q12904 312 aaKnown RBP20.93■□□□□ 0.94
YIF1A-209ENST00000494836 NUP98P52948 1817 aa20.92■□□□□ 0.94
YIF1A-209ENST00000494836 NIP7Q9Y221 180 aaKnown RBP eCLIP20.92■□□□□ 0.94
YIF1A-209ENST00000494836 ATP10DQ9P241 1426 aa20.92■□□□□ 0.94
YIF1A-209ENST00000494836 STK31Q9BXU1 1019 aa20.91■□□□□ 0.94
YIF1A-209ENST00000494836 GIGYF2Q6Y7W6 1299 aaKnown RBP20.9■□□□□ 0.94
YIF1A-209ENST00000494836 PXDNLA1KZ92 1463 aa20.89■□□□□ 0.94
YIF1A-209ENST00000494836 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.93
YIF1A-209ENST00000494836 NPHP1O15259 732 aa20.89■□□□□ 0.93
YIF1A-209ENST00000494836 TGFB2P61812 414 aa20.89■□□□□ 0.93
YIF1A-209ENST00000494836 HNRNPUQ00839 825 aaKnown RBP eCLIP20.89■□□□□ 0.93
YIF1A-209ENST00000494836 CNBD1Q8NA66 436 aa20.89■□□□□ 0.93
YIF1A-209ENST00000494836 KIAA1551Q9HCM1 1747 aa20.88■□□□□ 0.93
YIF1A-209ENST00000494836 SLFN5Q08AF3 891 aa20.88■□□□□ 0.93
YIF1A-209ENST00000494836 NBPF5PQ86XG9 351 aaPredicted RBP20.88■□□□□ 0.93
YIF1A-209ENST00000494836 TCERG1O14776 1098 aaKnown RBP20.87■□□□□ 0.93
YIF1A-209ENST00000494836 VAMP4O75379 141 aa20.87■□□□□ 0.93
YIF1A-209ENST00000494836 HSP90AB3PQ58FF7 597 aa20.87■□□□□ 0.93
YIF1A-209ENST00000494836 PRR5LQ6MZQ0 368 aa20.87■□□□□ 0.93
YIF1A-209ENST00000494836 PLBD2Q8NHP8 589 aa20.87■□□□□ 0.93
YIF1A-209ENST00000494836 CDCA7LQ96GN5 454 aa20.87■□□□□ 0.93
YIF1A-209ENST00000494836 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
YIF1A-209ENST00000494836 ANKRD36CQ5JPF3 1778 aa20.87■□□□□ 0.93
YIF1A-209ENST00000494836 GOLGB1Q14789 3259 aaKnown RBP20.86■□□□□ 0.93
YIF1A-209ENST00000494836 GPTP24298 496 aa20.86■□□□□ 0.93
YIF1A-209ENST00000494836 ST5P78524 1137 aa20.86■□□□□ 0.93
YIF1A-209ENST00000494836 ANKRD13DQ6ZTN6 518 aa20.86■□□□□ 0.93
YIF1A-209ENST00000494836 N4BP2Q86UW6 1770 aaPredicted RBP20.86■□□□□ 0.93
YIF1A-209ENST00000494836 FAM177BA6PVY3 158 aa20.85■□□□□ 0.93
YIF1A-209ENST00000494836 ZNF34Q8IZ26 560 aa20.85■□□□□ 0.93
YIF1A-209ENST00000494836 PELP1Q8IZL8 1130 aaKnown RBP20.85■□□□□ 0.93
YIF1A-209ENST00000494836 ARFGEF2Q9Y6D5 1785 aa20.85■□□□□ 0.93
YIF1A-209ENST00000494836 UBN2Q6ZU65 1347 aa20.84■□□□□ 0.93
YIF1A-209ENST00000494836 A0A0G2JLW4 131 aa20.84■□□□□ 0.93
YIF1A-209ENST00000494836 SLC4A2P04920 1241 aa20.84■□□□□ 0.93
YIF1A-209ENST00000494836 DPEP1P16444 411 aa20.84■□□□□ 0.93
YIF1A-209ENST00000494836 PARP10Q53GL7 1025 aa20.84■□□□□ 0.93
YIF1A-209ENST00000494836 TPTE2Q6XPS3 522 aa20.84■□□□□ 0.93
YIF1A-209ENST00000494836 IBTKQ9P2D0 1353 aaPredicted RBP20.84■□□□□ 0.93
YIF1A-209ENST00000494836 DDX58O95786 925 aaKnown RBP20.83■□□□□ 0.93
YIF1A-209ENST00000494836 GPR162Q16538 588 aa20.83■□□□□ 0.93
YIF1A-209ENST00000494836 RIC3Q7Z5B4 369 aa20.83■□□□□ 0.93
YIF1A-209ENST00000494836 CCDC24Q8N4L8 307 aa20.83■□□□□ 0.93
YIF1A-209ENST00000494836 BRIP1Q9BX63 1249 aa20.83■□□□□ 0.93
YIF1A-209ENST00000494836 NYXQ9GZU5 481 aa20.83■□□□□ 0.93
YIF1A-209ENST00000494836 ANKRD31Q8N7Z5 1873 aa20.83■□□□□ 0.92
YIF1A-209ENST00000494836 GTF2E1P29083 439 aaPredicted RBP20.82■□□□□ 0.92
YIF1A-209ENST00000494836 TCIRG1Q13488 830 aa20.82■□□□□ 0.92
YIF1A-209ENST00000494836 CACNA1FO60840 1977 aa20.82■□□□□ 0.92
YIF1A-209ENST00000494836 UTRNP46939 3433 aa20.82■□□□□ 0.92
YIF1A-209ENST00000494836 CHRNA5P30532 468 aa20.81■□□□□ 0.92
YIF1A-209ENST00000494836 PDE6BP35913 854 aa20.81■□□□□ 0.92
YIF1A-209ENST00000494836 TRMT2AQ8IZ69 625 aaKnown RBP20.81■□□□□ 0.92
YIF1A-209ENST00000494836 WWC3Q9ULE0 1092 aa20.81■□□□□ 0.92
YIF1A-209ENST00000494836 BRCA1P38398 1863 aaKnown RBP20.8■□□□□ 0.92
YIF1A-209ENST00000494836 SUSD4Q5VX71 490 aa20.8■□□□□ 0.92
YIF1A-209ENST00000494836 PPP1R42Q7Z4L9 355 aa20.8■□□□□ 0.92
YIF1A-209ENST00000494836 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
YIF1A-209ENST00000494836 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.923e-12■□□□□ 8.5
YIF1A-209ENST00000494836 FLIIQ13045 1269 aa20.79■□□□□ 0.92
YIF1A-209ENST00000494836 G2E3Q7L622 706 aa20.79■□□□□ 0.92
YIF1A-209ENST00000494836 NLRP10Q86W26 655 aa20.79■□□□□ 0.92
YIF1A-209ENST00000494836 NUTM1Q86Y26 1132 aa20.79■□□□□ 0.92
YIF1A-209ENST00000494836 C2CD5Q86YS7 1000 aa20.79■□□□□ 0.92
YIF1A-209ENST00000494836 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
YIF1A-209ENST00000494836 ABCC12Q96J65 1359 aa20.78■□□□□ 0.92
YIF1A-209ENST00000494836 H0YIN7 160 aa20.78■□□□□ 0.92
YIF1A-209ENST00000494836 NTSR2O95665 410 aa20.78■□□□□ 0.92
YIF1A-209ENST00000494836 KCNA3P22001 575 aa20.78■□□□□ 0.92
YIF1A-209ENST00000494836 UTP14AQ9BVJ6 771 aaKnown RBP20.78■□□□□ 0.92
YIF1A-209ENST00000494836 PIM2Q9P1W9 311 aa20.78■□□□□ 0.92
YIF1A-209ENST00000494836 COL11A2P13942 1736 aaPredicted RBP20.78■□□□□ 0.92
YIF1A-209ENST00000494836 ZBED9Q6R2W3 1325 aa20.78■□□□□ 0.92
YIF1A-209ENST00000494836 PI4KAP2A4QPH2 592 aa20.77■□□□□ 0.92
YIF1A-209ENST00000494836 ERFEQ4G0M1 354 aa20.77■□□□□ 0.92
YIF1A-209ENST00000494836 KSR2Q6VAB6 950 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 439.7 ms