RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.37
SAMM50-206ENST00000494795 SASH1O94885 1247 aa12.77□□□□□ -0.37
SAMM50-206ENST00000494795 GLI3P10071 1580 aa12.77□□□□□ -0.37
SAMM50-206ENST00000494795 OS9Q13438 667 aaPredicted RBP12.77□□□□□ -0.37
SAMM50-206ENST00000494795 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
SAMM50-206ENST00000494795 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.37
SAMM50-206ENST00000494795 CHGBP05060 677 aa12.77□□□□□ -0.37
SAMM50-206ENST00000494795 IL2RBP14784 551 aa12.77□□□□□ -0.37
SAMM50-206ENST00000494795 CHAMP1Q96JM3 812 aa12.77□□□□□ -0.37
SAMM50-206ENST00000494795 FMNL2Q96PY5 1086 aa12.77□□□□□ -0.37
SAMM50-206ENST00000494795 CCDC8Q9H0W5 538 aaPredicted RBP12.77□□□□□ -0.37
SAMM50-206ENST00000494795 GCKRQ14397 625 aa12.76□□□□□ -0.37
SAMM50-206ENST00000494795 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
SAMM50-206ENST00000494795 UBE3BQ7Z3V4 1068 aa12.76□□□□□ -0.37
SAMM50-206ENST00000494795 ASAP1Q9ULH1 1129 aa12.76□□□□□ -0.37
SAMM50-206ENST00000494795 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
SAMM50-206ENST00000494795 DDIT3P35638 169 aa12.76□□□□□ -0.37
SAMM50-206ENST00000494795 PKP1Q13835 747 aa12.76□□□□□ -0.37
SAMM50-206ENST00000494795 TUBGCP6Q96RT7 1819 aa12.76□□□□□ -0.37
SAMM50-206ENST00000494795 PKD1L3Q7Z443 1732 aa12.76□□□□□ -0.37
SAMM50-206ENST00000494795 VSIG10Q8N0Z9 540 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 ESYT1Q9BSJ8 1104 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 ZBTB3Q9H5J0 574 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 STAP2Q9UGK3 403 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 CCDC9Q9Y3X0 531 aaKnown RBP12.75□□□□□ -0.37
SAMM50-206ENST00000494795 SNX21Q969T3 373 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 AK9Q5TCS8 1911 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 ERC2O15083 957 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 ALDH1L1O75891 902 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 COL9A3Q14050 684 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-206ENST00000494795 EAF2Q96CJ1 260 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-206ENST00000494795 EDC3Q96F86 508 aaKnown RBP12.75□□□□□ -0.37
SAMM50-206ENST00000494795 METTL22Q9BUU2 404 aaPredicted RBP12.75□□□□□ -0.37
SAMM50-206ENST00000494795 ANO2Q9NQ90 1003 aa12.75□□□□□ -0.37
SAMM50-206ENST00000494795 ABCA3Q99758 1704 aa12.74□□□□□ -0.37
SAMM50-206ENST00000494795 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
SAMM50-206ENST00000494795 KIF1BPQ96EK5 621 aa12.74□□□□□ -0.37
SAMM50-206ENST00000494795 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
SAMM50-206ENST00000494795 CARD10Q9BWT7 1032 aa12.74□□□□□ -0.37
SAMM50-206ENST00000494795 ZGPATQ8N5A5 531 aaKnown RBP12.74□□□□□ -0.37
SAMM50-206ENST00000494795 ARXQ96QS3 562 aa12.74□□□□□ -0.37
SAMM50-206ENST00000494795 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
SAMM50-206ENST00000494795 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
SAMM50-206ENST00000494795 MRC1P22897 1456 aa12.74□□□□□ -0.37
SAMM50-206ENST00000494795 K7ELQ4 463 aaPredicted RBP12.73□□□□□ -0.37
SAMM50-206ENST00000494795 ADAMTS2O95450 1211 aa12.73□□□□□ -0.37
SAMM50-206ENST00000494795 MTX1Q13505 466 aa12.73□□□□□ -0.37
SAMM50-206ENST00000494795 AACSQ86V21 672 aa12.73□□□□□ -0.37
SAMM50-206ENST00000494795 DDX58O95786 925 aaKnown RBP12.73□□□□□ -0.37
SAMM50-206ENST00000494795 CWC27Q6UX04 472 aaKnown RBP12.73□□□□□ -0.37
SAMM50-206ENST00000494795 PAXIP1Q6ZW49 1069 aaPredicted RBP12.73□□□□□ -0.37
SAMM50-206ENST00000494795 PIGBQ92521 554 aa12.73□□□□□ -0.37
SAMM50-206ENST00000494795 UPF3BQ9BZI7 483 aaKnown RBP12.73□□□□□ -0.37
SAMM50-206ENST00000494795 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
SAMM50-206ENST00000494795 SHANK3Q9BYB0 1731 aa12.73□□□□□ -0.37
SAMM50-206ENST00000494795 SYNE4Q8N205 404 aa12.72□□□□□ -0.37
SAMM50-206ENST00000494795 A0A087WZG4 1122 aa12.72□□□□□ -0.37
SAMM50-206ENST00000494795 CCDC85AQ96PX6 553 aaPredicted RBP12.72□□□□□ -0.37
SAMM50-206ENST00000494795 GOLGB1Q14789 3259 aaKnown RBP12.72□□□□□ -0.37
SAMM50-206ENST00000494795 RAB11FIP3O75154 756 aa12.71□□□□□ -0.37
SAMM50-206ENST00000494795 GSE1Q14687 1217 aa12.71□□□□□ -0.37
SAMM50-206ENST00000494795 UTYO14607 1347 aa12.71□□□□□ -0.37
SAMM50-206ENST00000494795 CPA1P15085 419 aa12.71□□□□□ -0.37
SAMM50-206ENST00000494795 SSFA2P28290 1259 aa12.71□□□□□ -0.37
SAMM50-206ENST00000494795 TNPO1Q92973 898 aaKnown RBP12.71□□□□□ -0.37
SAMM50-206ENST00000494795 SLC4A9Q96Q91 983 aa12.71□□□□□ -0.37
SAMM50-206ENST00000494795 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.38
SAMM50-206ENST00000494795 SYTL4Q96C24 671 aaPredicted RBP12.71□□□□□ -0.38
SAMM50-206ENST00000494795 CHMP5Q9NZZ3 219 aa12.71□□□□□ -0.38
SAMM50-206ENST00000494795 TOGARAM1Q9Y4F4 1720 aa12.71□□□□□ -0.38
SAMM50-206ENST00000494795 NEXNQ0ZGT2 675 aa12.7□□□□□ -0.38
SAMM50-206ENST00000494795 SLFNL1Q499Z3 407 aa12.7□□□□□ -0.38
SAMM50-206ENST00000494795 KCPQ6ZWJ8 1503 aa12.7□□□□□ -0.38
SAMM50-206ENST00000494795 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
SAMM50-206ENST00000494795 EP400Q96L91 3159 aa12.7□□□□□ -0.38
SAMM50-206ENST00000494795 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
SAMM50-206ENST00000494795 ZNF594Q96JF6 807 aaPredicted RBP12.7□□□□□ -0.38
SAMM50-206ENST00000494795 BOLA2Q9H3K6 86 aa12.7□□□□□ -0.38
SAMM50-206ENST00000494795 A0A0G2JS52 829 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-206ENST00000494795 NEK4P51957 841 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 CASP7P55210 303 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 RASEFQ8IZ41 740 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 REC8O95072 547 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 MCM4P33991 863 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
SAMM50-206ENST00000494795 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-206ENST00000494795 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-206ENST00000494795 CLASRPQ8N2M8 674 aaKnown RBP12.69□□□□□ -0.38
SAMM50-206ENST00000494795 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-206ENST00000494795 PTH1RQ03431 593 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 FAM227BQ96M60 508 aa12.69□□□□□ -0.38
SAMM50-206ENST00000494795 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
SAMM50-206ENST00000494795 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
SAMM50-206ENST00000494795 TFCP2Q12800 502 aa12.68□□□□□ -0.38
SAMM50-206ENST00000494795 NUTM2AQ8IVF1 878 aaPredicted RBP12.68□□□□□ -0.38
SAMM50-206ENST00000494795 ATG3Q9NT62 314 aa12.68□□□□□ -0.38
SAMM50-206ENST00000494795 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms