RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CNKSR1Q969H4 720 aa30.86■■■□□ 2.53
COL27A1-208ENST00000494780 TIAM2Q8IVF5 1701 aa30.84■■■□□ 2.53
COL27A1-208ENST00000494780 NBPF26B4DH59 902 aa30.84■■■□□ 2.53
COL27A1-208ENST00000494780 SRGNP10124 158 aa30.84■■■□□ 2.53
COL27A1-208ENST00000494780 NBPF10Q6P3W6 841 aaKnown RBP30.84■■■□□ 2.53
COL27A1-208ENST00000494780 NBPF15Q8N660 670 aa30.84■■■□□ 2.53
COL27A1-208ENST00000494780 CCDC88AQ3V6T2 1871 aa30.84■■■□□ 2.53
COL27A1-208ENST00000494780 NBPF5PQ86XG9 351 aaPredicted RBP30.83■■■□□ 2.53
COL27A1-208ENST00000494780 SMC1BQ8NDV3 1235 aa30.83■■■□□ 2.53
COL27A1-208ENST00000494780 MASTLQ96GX5 879 aa30.83■■■□□ 2.53
COL27A1-208ENST00000494780 ZNF219Q9P2Y4 722 aaPredicted RBP30.83■■■□□ 2.53
COL27A1-208ENST00000494780 WDR90Q96KV7 1748 aa30.83■■■□□ 2.53
COL27A1-208ENST00000494780 VEGFAP15692 232 aaPredicted RBP30.82■■■□□ 2.52
COL27A1-208ENST00000494780 PNISRQ8TF01 805 aaKnown RBP30.82■■■□□ 2.52
COL27A1-208ENST00000494780 LTBP3Q9NS15 1303 aa30.81■■■□□ 2.52
COL27A1-208ENST00000494780 FER1L6Q2WGJ9 1857 aa30.81■■■□□ 2.52
COL27A1-208ENST00000494780 IFFO2Q5TF58 517 aa30.81■■■□□ 2.52
COL27A1-208ENST00000494780 PLEKHF1Q96S99 279 aa30.8■■■□□ 2.52
COL27A1-208ENST00000494780 MIS18AQ9NYP9 233 aa30.8■■■□□ 2.52
COL27A1-208ENST00000494780 SOGA3Q5TF21 947 aa30.79■■■□□ 2.52
COL27A1-208ENST00000494780 DPY19L2Q6NUT2 758 aa30.79■■■□□ 2.52
COL27A1-208ENST00000494780 PRPF40BQ6NWY9 871 aaKnown RBP30.79■■■□□ 2.52
COL27A1-208ENST00000494780 TPTE2Q6XPS3 522 aa30.78■■■□□ 2.52
COL27A1-208ENST00000494780 TAOK3Q9H2K8 898 aa30.78■■■□□ 2.52
COL27A1-208ENST00000494780 NIP7Q9Y221 180 aaKnown RBP eCLIP30.78■■■□□ 2.52
COL27A1-208ENST00000494780 SLX4Q8IY92 1834 aa30.77■■■□□ 2.52
COL27A1-208ENST00000494780 LAMB4A4D0S4 1761 aa30.77■■■□□ 2.52
COL27A1-208ENST00000494780 DLG5Q8TDM6 1919 aa30.77■■■□□ 2.52
COL27A1-208ENST00000494780 NFE2L2Q16236 605 aa30.77■■■□□ 2.52
COL27A1-208ENST00000494780 ERFEQ4G0M1 354 aa30.77■■■□□ 2.52
COL27A1-208ENST00000494780 PNNQ9H307 717 aaKnown RBP30.77■■■□□ 2.52
COL27A1-208ENST00000494780 ARFGEF2Q9Y6D5 1785 aa30.77■■■□□ 2.52
COL27A1-208ENST00000494780 DICER1Q9UPY3 1922 aaKnown RBP30.75■■■□□ 2.51
COL27A1-208ENST00000494780 KDM3BQ7LBC6 1761 aa30.75■■■□□ 2.51
COL27A1-208ENST00000494780 KLRG2A4D1S0 409 aaPredicted RBP30.75■■■□□ 2.51
COL27A1-208ENST00000494780 NPR1P16066 1061 aa30.74■■■□□ 2.51
COL27A1-208ENST00000494780 HTRA3P83110 453 aa30.73■■■□□ 2.51
COL27A1-208ENST00000494780 KLRG1Q96E93 195 aa30.73■■■□□ 2.51
COL27A1-208ENST00000494780 CACNA1SQ13698 1873 aa30.73■■■□□ 2.51
COL27A1-208ENST00000494780 EIF4A1P60842 406 aaKnown RBP30.72■■■□□ 2.51
COL27A1-208ENST00000494780 HLFQ16534 295 aa30.72■■■□□ 2.51
COL27A1-208ENST00000494780 MAPK8IP3Q9UPT6 1336 aa30.72■■■□□ 2.51
COL27A1-208ENST00000494780 POTECB2RU33 542 aa30.71■■■□□ 2.51
COL27A1-208ENST00000494780 C7orf43Q8WVR3 580 aa30.71■■■□□ 2.51
COL27A1-208ENST00000494780 ERVV-1B6SEH8 477 aa30.69■■■□□ 2.5
COL27A1-208ENST00000494780 CCDC93Q567U6 631 aa30.69■■■□□ 2.5
COL27A1-208ENST00000494780 THUMPD2Q9BTF0 503 aaKnown RBP30.69■■■□□ 2.5
COL27A1-208ENST00000494780 FAM177BA6PVY3 158 aa30.68■■■□□ 2.5
COL27A1-208ENST00000494780 GTF2E1P29083 439 aaPredicted RBP30.67■■■□□ 2.5
COL27A1-208ENST00000494780 NGEFQ8N5V2 710 aa30.67■■■□□ 2.5
COL27A1-208ENST00000494780 JMYQ8N9B5 988 aa30.66■■■□□ 2.5
COL27A1-208ENST00000494780 RRP7AQ9Y3A4 280 aaKnown RBP30.66■■■□□ 2.5
COL27A1-208ENST00000494780 MAP3K15Q6ZN16 1313 aa30.66■■■□□ 2.5
COL27A1-208ENST00000494780 RALBP1Q15311 655 aa30.65■■■□□ 2.5
COL27A1-208ENST00000494780 KIF6Q6ZMV9 814 aa30.65■■■□□ 2.5
COL27A1-208ENST00000494780 NYXQ9GZU5 481 aa30.65■■■□□ 2.5
COL27A1-208ENST00000494780 ALDH1B1P30837 517 aa30.64■■■□□ 2.5
COL27A1-208ENST00000494780 FKBP4Q02790 459 aaKnown RBP eCLIP30.63■■■□□ 2.49
COL27A1-208ENST00000494780 DDNO94850 711 aaPredicted RBP30.62■■■□□ 2.49
COL27A1-208ENST00000494780 MYL6BP14649 208 aa30.62■■■□□ 2.49
COL27A1-208ENST00000494780 TTLL7Q6ZT98 887 aa30.62■■■□□ 2.49
COL27A1-208ENST00000494780 ERBB4Q15303 1308 aa30.62■■■□□ 2.49
COL27A1-208ENST00000494780 RTKN2Q8IZC4 609 aa30.61■■■□□ 2.49
COL27A1-208ENST00000494780 NUP98P52948 1817 aa30.61■■■□□ 2.49
COL27A1-208ENST00000494780 CRY2Q49AN0 593 aa30.6■■■□□ 2.49
COL27A1-208ENST00000494780 IBTKQ9P2D0 1353 aaPredicted RBP30.59■■■□□ 2.49
COL27A1-208ENST00000494780 TSPYL4Q9UJ04 414 aa30.59■■■□□ 2.49
COL27A1-208ENST00000494780 ABCC12Q96J65 1359 aa30.58■■■□□ 2.49
COL27A1-208ENST00000494780 RIPK4P57078 832 aa30.58■■■□□ 2.49
COL27A1-208ENST00000494780 NUTM1Q86Y26 1132 aa30.58■■■□□ 2.49
COL27A1-208ENST00000494780 ZBTB3Q9H5J0 574 aa30.58■■■□□ 2.49
COL27A1-208ENST00000494780 OLFM4Q6UX06 510 aa30.57■■■□□ 2.48
COL27A1-208ENST00000494780 ZNF277Q9NRM2 450 aaPredicted RBP30.57■■■□□ 2.48
COL27A1-208ENST00000494780 BABAM1Q9NWV8 329 aa30.57■■■□□ 2.48
COL27A1-208ENST00000494780 RIC1Q4ADV7 1423 aa30.56■■■□□ 2.48
COL27A1-208ENST00000494780 IQCA1LA6NCM1 817 aa30.56■■■□□ 2.48
COL27A1-208ENST00000494780 CHADLQ6NUI6 762 aa30.56■■■□□ 2.48
COL27A1-208ENST00000494780 L3MBTL3Q96JM7 780 aaPredicted RBP30.56■■■□□ 2.48
COL27A1-208ENST00000494780 UBN2Q6ZU65 1347 aa30.55■■■□□ 2.48
COL27A1-208ENST00000494780 GPTP24298 496 aa30.55■■■□□ 2.48
COL27A1-208ENST00000494780 LMOD3Q0VAK6 560 aa30.55■■■□□ 2.48
COL27A1-208ENST00000494780 GIGYF2Q6Y7W6 1299 aaKnown RBP30.55■■■□□ 2.48
COL27A1-208ENST00000494780 ZNF34Q8IZ26 560 aa30.55■■■□□ 2.48
COL27A1-208ENST00000494780 TMPOP42166 694 aaKnown RBP30.53■■■□□ 2.48
COL27A1-208ENST00000494780 SUSD4Q5VX71 490 aa30.53■■■□□ 2.48
COL27A1-208ENST00000494780 SYNE4Q8N205 404 aa30.53■■■□□ 2.48
COL27A1-208ENST00000494780 HOXA10P31260 410 aaPredicted RBP30.52■■■□□ 2.48
COL27A1-208ENST00000494780 IARSP41252 1262 aaKnown RBP30.52■■■□□ 2.48
COL27A1-208ENST00000494780 CC2D2BQ6DHV5 1058 aa30.52■■■□□ 2.48
COL27A1-208ENST00000494780 RPGRQ92834 1020 aaKnown RBP30.52■■■□□ 2.48
COL27A1-208ENST00000494780 SNED1Q8TER0 1413 aa30.51■■■□□ 2.47
COL27A1-208ENST00000494780 POTEIP0CG38 1075 aa30.51■■■□□ 2.47
COL27A1-208ENST00000494780 POTEJP0CG39 1038 aa30.51■■■□□ 2.47
COL27A1-208ENST00000494780 PDIA6Q15084 440 aa30.51■■■□□ 2.47
COL27A1-208ENST00000494780 LRP10Q7Z4F1 713 aa30.51■■■□□ 2.47
COL27A1-208ENST00000494780 PSMD1Q99460 953 aa30.51■■■□□ 2.47
COL27A1-208ENST00000494780 SCN4AP35499 1836 aa30.51■■■□□ 2.47
COL27A1-208ENST00000494780 ZNF541Q9H0D2 1346 aa30.5■■■□□ 2.47
COL27A1-208ENST00000494780 NTSR2O95665 410 aa30.5■■■□□ 2.47
COL27A1-208ENST00000494780 EIF2S2P20042 333 aaKnown RBP30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms