RNA–Protein interactions for RNA: ENST00000494641.1

TRMT2A-219, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 3

Gene TRMT2A, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-219ENST00000494641 ADAMTSL1Q8N6G6 1762 aa23.43■■□□□ 1.34
TRMT2A-219ENST00000494641 DIAPH1O60610 1272 aaKnown RBP23.43■■□□□ 1.34
TRMT2A-219ENST00000494641 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
TRMT2A-219ENST00000494641 SETDB2Q96T68 719 aa23.43■■□□□ 1.34
TRMT2A-219ENST00000494641 SCN4AP35499 1836 aa23.43■■□□□ 1.34
TRMT2A-219ENST00000494641 MASTLQ96GX5 879 aa23.42■■□□□ 1.34
TRMT2A-219ENST00000494641 TEX13AQ9BXU3 409 aaPredicted RBP23.42■■□□□ 1.34
TRMT2A-219ENST00000494641 ZNF541Q9H0D2 1346 aa23.41■■□□□ 1.34
TRMT2A-219ENST00000494641 CLSPNQ9HAW4 1339 aa23.41■■□□□ 1.34
TRMT2A-219ENST00000494641 KCNQ3O43525 872 aa23.41■■□□□ 1.34
TRMT2A-219ENST00000494641 IQCA1LA6NCM1 817 aa23.4■■□□□ 1.34
TRMT2A-219ENST00000494641 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
TRMT2A-219ENST00000494641 PER1O15534 1290 aaPredicted RBP23.39■■□□□ 1.33
TRMT2A-219ENST00000494641 ST5P78524 1137 aa23.39■■□□□ 1.33
TRMT2A-219ENST00000494641 TEFQ10587 303 aa23.39■■□□□ 1.33
TRMT2A-219ENST00000494641 SOGA3Q5TF21 947 aa23.39■■□□□ 1.33
TRMT2A-219ENST00000494641 OLFM4Q6UX06 510 aa23.39■■□□□ 1.33
TRMT2A-219ENST00000494641 WBP1LQ9NX94 342 aa23.39■■□□□ 1.33
TRMT2A-219ENST00000494641 KLRG2A4D1S0 409 aaPredicted RBP23.38■■□□□ 1.33
TRMT2A-219ENST00000494641 TMEM88BA6NKF7 163 aa23.38■■□□□ 1.33
TRMT2A-219ENST00000494641 GNAT3A8MTJ3 354 aa23.38■■□□□ 1.33
TRMT2A-219ENST00000494641 PIP4K2AP48426 406 aaPredicted RBP23.38■■□□□ 1.33
TRMT2A-219ENST00000494641 CTCFP49711 727 aaPredicted RBP23.38■■□□□ 1.33
TRMT2A-219ENST00000494641 FMNL2Q96PY5 1086 aa23.38■■□□□ 1.33
TRMT2A-219ENST00000494641 DZIP3Q86Y13 1208 aaKnown RBP23.37■■□□□ 1.33
TRMT2A-219ENST00000494641 CCDC93Q567U6 631 aa23.36■■□□□ 1.33
TRMT2A-219ENST00000494641 ZNF277Q9NRM2 450 aaPredicted RBP23.36■■□□□ 1.33
TRMT2A-219ENST00000494641 USP16Q9Y5T5 823 aa23.36■■□□□ 1.33
TRMT2A-219ENST00000494641 KIF7Q2M1P5 1343 aa23.35■■□□□ 1.33
TRMT2A-219ENST00000494641 SNED1Q8TER0 1413 aa23.35■■□□□ 1.33
TRMT2A-219ENST00000494641 PRAMEF22A3QJZ6 481 aa23.35■■□□□ 1.33
TRMT2A-219ENST00000494641 LBX1P52954 281 aa23.35■■□□□ 1.33
TRMT2A-219ENST00000494641 FKBP4Q02790 459 aaKnown RBP eCLIP23.35■■□□□ 1.33
TRMT2A-219ENST00000494641 EAPPQ56P03 285 aaPredicted RBP23.34■■□□□ 1.33
TRMT2A-219ENST00000494641 GAS2L2Q8NHY3 880 aa23.34■■□□□ 1.33
TRMT2A-219ENST00000494641 RASSF10A6NK89 507 aa23.33■■□□□ 1.33
TRMT2A-219ENST00000494641 NPHP1O15259 732 aa23.33■■□□□ 1.33
TRMT2A-219ENST00000494641 NPR1P16066 1061 aa23.33■■□□□ 1.33
TRMT2A-219ENST00000494641 EPHX2P34913 555 aa23.33■■□□□ 1.33
TRMT2A-219ENST00000494641 CC2D1BQ5T0F9 858 aaKnown RBP23.33■■□□□ 1.33
TRMT2A-219ENST00000494641 NBPF5PQ86XG9 351 aaPredicted RBP23.33■■□□□ 1.33
TRMT2A-219ENST00000494641 AIDAQ96BJ3 306 aa23.33■■□□□ 1.33
TRMT2A-219ENST00000494641 HACL1Q9UJ83 578 aa23.33■■□□□ 1.33
TRMT2A-219ENST00000494641 HSPA8P11142 646 aaKnown RBP23.32■■□□□ 1.32
TRMT2A-219ENST00000494641 CLEC4GQ6UXB4 293 aa23.32■■□□□ 1.32
TRMT2A-219ENST00000494641 PHACTR3Q96KR7 559 aa23.32■■□□□ 1.32
TRMT2A-219ENST00000494641 RNF123Q5XPI4 1314 aa23.32■■□□□ 1.32
TRMT2A-219ENST00000494641 FZD9O00144 591 aa23.31■■□□□ 1.32
TRMT2A-219ENST00000494641 MAP1SQ66K74 1059 aaPredicted RBP23.31■■□□□ 1.32
TRMT2A-219ENST00000494641 COL4A5P29400 1685 aa23.31■■□□□ 1.32
TRMT2A-219ENST00000494641 BTBD11A6QL63 1104 aa23.3■■□□□ 1.32
TRMT2A-219ENST00000494641 U2SURPO15042 1029 aaKnown RBP23.3■■□□□ 1.32
TRMT2A-219ENST00000494641 NBPF26B4DH59 902 aa23.29■■□□□ 1.32
TRMT2A-219ENST00000494641 SLC34A2O95436 690 aa23.29■■□□□ 1.32
TRMT2A-219ENST00000494641 NBPF10Q6P3W6 841 aaKnown RBP23.29■■□□□ 1.32
TRMT2A-219ENST00000494641 CNTROBQ8N137 903 aa23.29■■□□□ 1.32
TRMT2A-219ENST00000494641 NBPF15Q8N660 670 aa23.29■■□□□ 1.32
TRMT2A-219ENST00000494641 LTBP1Q14766 1721 aa23.28■■□□□ 1.32
TRMT2A-219ENST00000494641 ABHD8Q96I13 439 aa23.28■■□□□ 1.32
TRMT2A-219ENST00000494641 PCGF6Q9BYE7 350 aa23.28■■□□□ 1.32
TRMT2A-219ENST00000494641 CLEC11AQ9Y240 323 aa23.28■■□□□ 1.32
TRMT2A-219ENST00000494641 THSD7BQ9C0I4 1608 aa23.27■■□□□ 1.32
TRMT2A-219ENST00000494641 IARSP41252 1262 aaKnown RBP23.27■■□□□ 1.32
TRMT2A-219ENST00000494641 DEFB115Q30KQ5 88 aa23.27■■□□□ 1.32
TRMT2A-219ENST00000494641 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
TRMT2A-219ENST00000494641 RTKN2Q8IZC4 609 aa23.27■■□□□ 1.32
TRMT2A-219ENST00000494641 WDR33Q9C0J8 1336 aaKnown RBP23.27■■□□□ 1.32
TRMT2A-219ENST00000494641 PNMA8AQ86V59 439 aaPredicted RBP23.26■■□□□ 1.31
TRMT2A-219ENST00000494641 SYNE4Q8N205 404 aa23.26■■□□□ 1.31
TRMT2A-219ENST00000494641 NIP7Q9Y221 180 aaKnown RBP eCLIP23.26■■□□□ 1.31
TRMT2A-219ENST00000494641 FMR1Q06787 632 aaKnown RBP eCLIP23.25■■□□□ 1.315e-7■□□□□ 8.6
TRMT2A-219ENST00000494641 GPC2Q8N158 579 aa23.25■■□□□ 1.31
TRMT2A-219ENST00000494641 RGL2O15211 777 aa23.24■■□□□ 1.31
TRMT2A-219ENST00000494641 HLFQ16534 295 aa23.24■■□□□ 1.31
TRMT2A-219ENST00000494641 TPTE2Q6XPS3 522 aa23.24■■□□□ 1.31
TRMT2A-219ENST00000494641 SLC51AQ86UW1 340 aa23.24■■□□□ 1.31
TRMT2A-219ENST00000494641 RSPH6AQ9H0K4 717 aa23.24■■□□□ 1.31
TRMT2A-219ENST00000494641 ZNF652Q9Y2D9 606 aa23.24■■□□□ 1.31
TRMT2A-219ENST00000494641 FAM177BA6PVY3 158 aa23.23■■□□□ 1.31
TRMT2A-219ENST00000494641 SNRPA1P09661 255 aaKnown RBP23.23■■□□□ 1.31
TRMT2A-219ENST00000494641 PRKAR2BP31323 418 aa23.23■■□□□ 1.31
TRMT2A-219ENST00000494641 DDX21Q9NR30 783 aaKnown RBP eCLIP23.23■■□□□ 1.31
TRMT2A-219ENST00000494641 ABCC12Q96J65 1359 aa23.23■■□□□ 1.31
TRMT2A-219ENST00000494641 NPC1L1Q9UHC9 1359 aa23.23■■□□□ 1.31
TRMT2A-219ENST00000494641 FAM161AQ3B820 660 aa23.22■■□□□ 1.31
TRMT2A-219ENST00000494641 CRY2Q49AN0 593 aa23.22■■□□□ 1.31
TRMT2A-219ENST00000494641 PSMD1Q99460 953 aa23.22■■□□□ 1.31
TRMT2A-219ENST00000494641 MAP2K1Q02750 393 aaPredicted RBP23.21■■□□□ 1.31
TRMT2A-219ENST00000494641 SCNN1DP51172 638 aa23.2■■□□□ 1.3
TRMT2A-219ENST00000494641 MCM10Q7L590 875 aa23.2■■□□□ 1.3
TRMT2A-219ENST00000494641 ABT1Q9ULW3 272 aaKnown RBP23.2■■□□□ 1.3
TRMT2A-219ENST00000494641 ALDH1B1P30837 517 aa23.19■■□□□ 1.3
TRMT2A-219ENST00000494641 EPS15P42566 896 aa23.18■■□□□ 1.3
TRMT2A-219ENST00000494641 CST9Q5W186 159 aa23.18■■□□□ 1.3
TRMT2A-219ENST00000494641 CNGB1Q14028 1251 aaPredicted RBP23.17■■□□□ 1.3
TRMT2A-219ENST00000494641 CAPNS2Q96L46 248 aa23.17■■□□□ 1.3
TRMT2A-219ENST00000494641 DCTN1Q14203 1278 aa23.16■■□□□ 1.3
TRMT2A-219ENST00000494641 NUTM1Q86Y26 1132 aa23.16■■□□□ 1.3
TRMT2A-219ENST00000494641 JDP2Q8WYK2 163 aa23.16■■□□□ 1.3
TRMT2A-219ENST00000494641 GJA3Q9Y6H8 435 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms