RNA–Protein interactions for RNA: ENST00000494641.1

TRMT2A-219, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 3

Gene TRMT2A, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-219ENST00000494641 NISCHQ9Y2I1 1504 aa44.4■■■■■ 4.7
TRMT2A-219ENST00000494641 ABCC9O60706 1549 aa40.57■■■■■ 4.08
TRMT2A-219ENST00000494641 CCDC180Q9P1Z9 1646 aa40.02■■■■■ 4
TRMT2A-219ENST00000494641 DNAJC5BQ9UF47 199 aa38.65■■■■□ 3.78
TRMT2A-219ENST00000494641 RB1CC1Q8TDY2 1594 aa38.32■■■■□ 3.73
TRMT2A-219ENST00000494641 NACADO15069 1562 aa37.96■■■■□ 3.67
TRMT2A-219ENST00000494641 PABPN1Q86U42 306 aaKnown RBP eCLIP37.69■■■■□ 3.62
TRMT2A-219ENST00000494641 DCAF8L2P0C7V8 631 aa37.56■■■■□ 3.6
TRMT2A-219ENST00000494641 UNC13AQ9UPW8 1703 aa37.53■■■■□ 3.6
TRMT2A-219ENST00000494641 BICRAQ9NZM4 1560 aa37.38■■■■□ 3.57
TRMT2A-219ENST00000494641 MYO15BQ96JP2 1530 aa37.3■■■■□ 3.56
TRMT2A-219ENST00000494641 ZCCHC6Q5VYS8 1495 aaKnown RBP36.7■■■■□ 3.47
TRMT2A-219ENST00000494641 SHROOM4Q9ULL8 1493 aa36.69■■■■□ 3.46
TRMT2A-219ENST00000494641 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
TRMT2A-219ENST00000494641 CC2D2AQ9P2K1 1620 aa36.63■■■■□ 3.45
TRMT2A-219ENST00000494641 CECR2Q9BXF3 1484 aa36.59■■■■□ 3.45
TRMT2A-219ENST00000494641 SCRIBQ14160 1630 aa36.45■■■■□ 3.43
TRMT2A-219ENST00000494641 EIF4G1Q04637 1599 aaKnown RBP36.42■■■■□ 3.42
TRMT2A-219ENST00000494641 DNAJC5Q9H3Z4 198 aa35.77■■■■□ 3.32
TRMT2A-219ENST00000494641 CUX2O14529 1486 aa35.15■■■■□ 3.22
TRMT2A-219ENST00000494641 NCAPD3P42695 1498 aa35.1■■■■□ 3.21
TRMT2A-219ENST00000494641 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
TRMT2A-219ENST00000494641 ATAD2BQ9ULI0 1458 aa34.92■■■■□ 3.18
TRMT2A-219ENST00000494641 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
TRMT2A-219ENST00000494641 NESP48681 1621 aa34.75■■■■□ 3.15
TRMT2A-219ENST00000494641 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
TRMT2A-219ENST00000494641 SMARCA2P51531 1590 aa34.72■■■■□ 3.15
TRMT2A-219ENST00000494641 THOC2Q8NI27 1593 aaKnown RBP34.49■■■■□ 3.11
TRMT2A-219ENST00000494641 BAZ1BQ9UIG0 1483 aaKnown RBP34.49■■■■□ 3.11
TRMT2A-219ENST00000494641 BAZ1AQ9NRL2 1556 aaPredicted RBP34.45■■■■□ 3.1
TRMT2A-219ENST00000494641 PEG3Q9GZU2 1588 aa34.43■■■■□ 3.1
TRMT2A-219ENST00000494641 LAMC3Q9Y6N6 1575 aa34.33■■■■□ 3.09
TRMT2A-219ENST00000494641 MROH2BQ7Z745 1585 aa34.23■■■■□ 3.07
TRMT2A-219ENST00000494641 KIF21AQ7Z4S6 1674 aa34.23■■■■□ 3.07
TRMT2A-219ENST00000494641 PDS5BQ9NTI5 1447 aa34.13■■■■□ 3.05
TRMT2A-219ENST00000494641 CADPSQ9ULU8 1353 aa33.98■■■■□ 3.03
TRMT2A-219ENST00000494641 MRC2Q9UBG0 1479 aa33.91■■■■□ 3.02
TRMT2A-219ENST00000494641 TRIM41Q8WV44 630 aa33.91■■■■□ 3.02
TRMT2A-219ENST00000494641 WDR62O43379 1518 aa33.88■■■■□ 3.01
TRMT2A-219ENST00000494641 WIZO95785 1651 aa33.77■■■■□ 3
TRMT2A-219ENST00000494641 CEP164Q9UPV0 1460 aa33.64■■■□□ 2.98
TRMT2A-219ENST00000494641 FANCD2Q9BXW9 1451 aa33.59■■■□□ 2.97
TRMT2A-219ENST00000494641 CFTRP13569 1480 aa33.51■■■□□ 2.96
TRMT2A-219ENST00000494641 OSCARQ8IYS5 282 aa33.41■■■□□ 2.94
TRMT2A-219ENST00000494641 URB2Q14146 1524 aaKnown RBP33.41■■■□□ 2.94
TRMT2A-219ENST00000494641 RSF1Q96T23 1441 aaPredicted RBP33.33■■■□□ 2.93
TRMT2A-219ENST00000494641 TOP2AP11388 1531 aaKnown RBP33.28■■■□□ 2.92
TRMT2A-219ENST00000494641 RIMBP3CA6NJZ7 1639 aa33.11■■■□□ 2.89
TRMT2A-219ENST00000494641 RIMBP3BA6NNM3 1639 aa33.11■■■□□ 2.89
TRMT2A-219ENST00000494641 RIMBP3Q9UFD9 1639 aa33.11■■■□□ 2.89
TRMT2A-219ENST00000494641 ZNF608Q9ULD9 1512 aaPredicted RBP33.09■■■□□ 2.89
TRMT2A-219ENST00000494641 PRDM2Q13029 1718 aa33.05■■■□□ 2.88
TRMT2A-219ENST00000494641 IFT140Q96RY7 1462 aa33■■■□□ 2.87
TRMT2A-219ENST00000494641 ARHGEF11O15085 1522 aa32.96■■■□□ 2.87
TRMT2A-219ENST00000494641 CCDC88BA6NC98 1476 aa32.94■■■□□ 2.86
TRMT2A-219ENST00000494641 TOPBP1Q92547 1522 aa32.92■■■□□ 2.86
TRMT2A-219ENST00000494641 EIF4G3O43432 1585 aaKnown RBP32.83■■■□□ 2.85
TRMT2A-219ENST00000494641 DNMBPQ6XZF7 1577 aa32.73■■■□□ 2.83
TRMT2A-219ENST00000494641 ABCC8Q09428 1581 aa32.71■■■□□ 2.83
TRMT2A-219ENST00000494641 TARBP1Q13395 1621 aaKnown RBP32.69■■■□□ 2.82
TRMT2A-219ENST00000494641 AQRO60306 1485 aaKnown RBP eCLIP32.69■■■□□ 2.825e-7■■■■□ 22.7
TRMT2A-219ENST00000494641 CYB5RLQ6IPT4 315 aa32.69■■■□□ 2.82
TRMT2A-219ENST00000494641 CHD1O14646 1710 aa32.66■■■□□ 2.82
TRMT2A-219ENST00000494641 ARAP1Q96P48 1450 aa32.63■■■□□ 2.81
TRMT2A-219ENST00000494641 POLA1P09884 1462 aaPredicted RBP32.56■■■□□ 2.8
TRMT2A-219ENST00000494641 FBLN2P98095 1184 aa32.46■■■□□ 2.79
TRMT2A-219ENST00000494641 RAD54L2Q9Y4B4 1467 aa32.46■■■□□ 2.79
TRMT2A-219ENST00000494641 TRHP20396 242 aaPredicted RBP32.43■■■□□ 2.78
TRMT2A-219ENST00000494641 TDRD9Q8NDG6 1382 aaKnown RBP32.4■■■□□ 2.78
TRMT2A-219ENST00000494641 SOGA1O94964 1423 aa32.35■■■□□ 2.77
TRMT2A-219ENST00000494641 CLASP1Q7Z460 1538 aa32.34■■■□□ 2.77
TRMT2A-219ENST00000494641 SNAPC4Q5SXM2 1469 aa32.32■■■□□ 2.76
TRMT2A-219ENST00000494641 FGD5Q6ZNL6 1462 aa32.26■■■□□ 2.75
TRMT2A-219ENST00000494641 WDR97A6NE52 1622 aa32.23■■■□□ 2.75
TRMT2A-219ENST00000494641 CUX1P39880 1505 aa32.19■■■□□ 2.74
TRMT2A-219ENST00000494641 MAGI1Q96QZ7 1491 aaPredicted RBP32.18■■■□□ 2.74
TRMT2A-219ENST00000494641 SYNJ1O43426 1573 aa32.16■■■□□ 2.74
TRMT2A-219ENST00000494641 CHMP7Q8WUX9 453 aaPredicted RBP32.14■■■□□ 2.74
TRMT2A-219ENST00000494641 GRIN2BQ13224 1484 aa32.13■■■□□ 2.73
TRMT2A-219ENST00000494641 SYNJ2O15056 1496 aa32.1■■■□□ 2.73
TRMT2A-219ENST00000494641 GAPVD1Q14C86 1478 aa31.97■■■□□ 2.71
TRMT2A-219ENST00000494641 PBRM1Q86U86 1689 aa31.96■■■□□ 2.71
TRMT2A-219ENST00000494641 ABCA5Q8WWZ7 1642 aa31.89■■■□□ 2.7
TRMT2A-219ENST00000494641 ABCA10Q8WWZ4 1543 aa31.87■■■□□ 2.69
TRMT2A-219ENST00000494641 ERCC6L2Q5T890 1561 aa31.83■■■□□ 2.69
TRMT2A-219ENST00000494641 AEBP2Q6ZN18 517 aaPredicted RBP31.81■■■□□ 2.68
TRMT2A-219ENST00000494641 GRIN2AQ12879 1464 aa31.74■■■□□ 2.67
TRMT2A-219ENST00000494641 CEP170Q5SW79 1584 aa31.69■■■□□ 2.66
TRMT2A-219ENST00000494641 NUP160Q12769 1436 aa31.69■■■□□ 2.66
TRMT2A-219ENST00000494641 ADAMTS12P58397 1594 aa31.67■■■□□ 2.66
TRMT2A-219ENST00000494641 SHROOM2Q13796 1616 aa31.61■■■□□ 2.65
TRMT2A-219ENST00000494641 WRNQ14191 1432 aaPredicted RBP eCLIP31.58■■■□□ 2.652e-9■■■■■ 83.6
TRMT2A-219ENST00000494641 FHAD1B1AJZ9 1412 aa31.52■■■□□ 2.64
TRMT2A-219ENST00000494641 BIVM-ERCC5R4GMW8 1640 aa31.49■■■□□ 2.63
TRMT2A-219ENST00000494641 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
TRMT2A-219ENST00000494641 KIF13AQ9H1H9 1805 aa31.45■■■□□ 2.63
TRMT2A-219ENST00000494641 ERICH3Q5RHP9 1530 aa31.43■■■□□ 2.62
TRMT2A-219ENST00000494641 PRG4Q92954 1404 aaPredicted RBP31.38■■■□□ 2.61
TRMT2A-219ENST00000494641 SUPT5HO00267 1087 aaKnown RBP31.34■■■□□ 2.61
TRMT2A-219ENST00000494641 JPH4Q96JJ6 628 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms