RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 HSP90AB4PQ58FF6 505 aa16.83■□□□□ 0.29
VCP-207ENST00000493886 FMNL2Q96PY5 1086 aa16.83■□□□□ 0.29
VCP-207ENST00000493886 RABEP1Q15276 862 aa16.83■□□□□ 0.28
VCP-207ENST00000493886 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
VCP-207ENST00000493886 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
VCP-207ENST00000493886 TNPO1Q92973 898 aaKnown RBP16.83■□□□□ 0.28
VCP-207ENST00000493886 USP16Q9Y5T5 823 aa16.83■□□□□ 0.28
VCP-207ENST00000493886 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
VCP-207ENST00000493886 TRIM6-TRIM34B2RNG4 842 aa16.83■□□□□ 0.28
VCP-207ENST00000493886 K7ELQ4 463 aaPredicted RBP16.82■□□□□ 0.28
VCP-207ENST00000493886 GRM8O00222 908 aa16.82■□□□□ 0.28
VCP-207ENST00000493886 LARP1Q6PKG0 1096 aaKnown RBP16.82■□□□□ 0.28
VCP-207ENST00000493886 ZCRB1Q8TBF4 217 aaKnown RBP16.82■□□□□ 0.28
VCP-207ENST00000493886 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
VCP-207ENST00000493886 COPS6Q7L5N1 327 aa16.82■□□□□ 0.28
VCP-207ENST00000493886 RILPL2Q969X0 211 aa16.82■□□□□ 0.28
VCP-207ENST00000493886 UTYO14607 1347 aa16.82■□□□□ 0.28
VCP-207ENST00000493886 PCDH11XQ9BZA7 1347 aa16.82■□□□□ 0.28
VCP-207ENST00000493886 PCDH11YQ9BZA8 1340 aa16.82■□□□□ 0.28
VCP-207ENST00000493886 ABCA3Q99758 1704 aa16.81■□□□□ 0.28
VCP-207ENST00000493886 IGKV5-2P06315 115 aa16.81■□□□□ 0.28
VCP-207ENST00000493886 DDIT3P35638 169 aa16.81■□□□□ 0.28
VCP-207ENST00000493886 AK9Q5TCS8 1911 aa16.81■□□□□ 0.28
VCP-207ENST00000493886 BRD2P25440 801 aaKnown RBP16.8■□□□□ 0.28
VCP-207ENST00000493886 NEXNQ0ZGT2 675 aa16.8■□□□□ 0.28
VCP-207ENST00000493886 OS9Q13438 667 aaPredicted RBP16.8■□□□□ 0.28
VCP-207ENST00000493886 LRP10Q7Z4F1 713 aa16.8■□□□□ 0.28
VCP-207ENST00000493886 SUCLG2Q96I99 432 aa16.8■□□□□ 0.28
VCP-207ENST00000493886 ESYT1Q9BSJ8 1104 aa16.8■□□□□ 0.28
VCP-207ENST00000493886 CHMLP26374 656 aa16.8■□□□□ 0.28
VCP-207ENST00000493886 UNC5CLQ8IV45 518 aa16.8■□□□□ 0.28
VCP-207ENST00000493886 CARD10Q9BWT7 1032 aa16.8■□□□□ 0.28
VCP-207ENST00000493886 IL2RBP14784 551 aa16.79■□□□□ 0.28
VCP-207ENST00000493886 KAZALD1Q96I82 304 aa16.79■□□□□ 0.28
VCP-207ENST00000493886 METTL22Q9BUU2 404 aaPredicted RBP16.79■□□□□ 0.28
VCP-207ENST00000493886 FSD2A1L4K1 749 aa16.78■□□□□ 0.28
VCP-207ENST00000493886 DDX11L8A8MPP1 907 aa16.78■□□□□ 0.28
VCP-207ENST00000493886 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
VCP-207ENST00000493886 PIP4K2AP48426 406 aaPredicted RBP16.78■□□□□ 0.28
VCP-207ENST00000493886 ANKRD13DQ6ZTN6 518 aa16.78■□□□□ 0.28
VCP-207ENST00000493886 PI4K2BQ8TCG2 481 aa16.78■□□□□ 0.28
VCP-207ENST00000493886 NHSL1Q5SYE7 1610 aa16.78■□□□□ 0.28
VCP-207ENST00000493886 MYD88Q99836 296 aa16.78■□□□□ 0.28
VCP-207ENST00000493886 BICC1Q9H694 974 aaKnown RBP16.78■□□□□ 0.28
VCP-207ENST00000493886 STRN4Q9NRL3 753 aa16.78■□□□□ 0.28
VCP-207ENST00000493886 PA2G4Q9UQ80 394 aaKnown RBP16.77■□□□□ 0.28
VCP-207ENST00000493886 GLI3P10071 1580 aa16.77■□□□□ 0.28
VCP-207ENST00000493886 CIZ1Q9ULV3 898 aaPredicted RBP16.77■□□□□ 0.27
VCP-207ENST00000493886 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
VCP-207ENST00000493886 EVA1CP58658 441 aa16.76■□□□□ 0.27
VCP-207ENST00000493886 GCKRQ14397 625 aa16.76■□□□□ 0.27
VCP-207ENST00000493886 SAMD1Q6SPF0 538 aaPredicted RBP16.76■□□□□ 0.27
VCP-207ENST00000493886 SSFA2P28290 1259 aa16.76■□□□□ 0.27
VCP-207ENST00000493886 NKX1-1Q15270 411 aaPredicted RBP16.76■□□□□ 0.27
VCP-207ENST00000493886 ERC1Q8IUD2 1116 aa16.76■□□□□ 0.27
VCP-207ENST00000493886 CLASRPQ8N2M8 674 aaKnown RBP16.76■□□□□ 0.27
VCP-207ENST00000493886 LAMB4A4D0S4 1761 aa16.75■□□□□ 0.27
VCP-207ENST00000493886 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
VCP-207ENST00000493886 DDX54Q8TDD1 881 aaKnown RBP16.75■□□□□ 0.27
VCP-207ENST00000493886 TTC41PQ6P2S7 1318 aa16.74■□□□□ 0.27
VCP-207ENST00000493886 MAP4K4O95819 1239 aaPredicted RBP16.74■□□□□ 0.27
VCP-207ENST00000493886 RAB3GAP1Q15042 981 aa16.74■□□□□ 0.27
VCP-207ENST00000493886 ANO2Q9NQ90 1003 aa16.74■□□□□ 0.27
VCP-207ENST00000493886 ST18O60284 1047 aa16.73■□□□□ 0.27
VCP-207ENST00000493886 CNTROBQ8N137 903 aa16.73■□□□□ 0.27
VCP-207ENST00000493886 GBP4Q96PP9 640 aa16.73■□□□□ 0.27
VCP-207ENST00000493886 GRPEL1Q9HAV7 217 aa16.73■□□□□ 0.27
VCP-207ENST00000493886 SHANK3Q9BYB0 1731 aa16.73■□□□□ 0.27
VCP-207ENST00000493886 ERBB4Q15303 1308 aa16.73■□□□□ 0.27
VCP-207ENST00000493886 GLRX3O76003 335 aaKnown RBP16.73■□□□□ 0.27
VCP-207ENST00000493886 MCCP23508 829 aa16.72■□□□□ 0.27
VCP-207ENST00000493886 G3BP1Q13283 466 aaKnown RBP eCLIP16.72■□□□□ 0.271e-7■■■■□ 20.9
VCP-207ENST00000493886 GAS2L3Q86XJ1 694 aa16.72■□□□□ 0.27
VCP-207ENST00000493886 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
VCP-207ENST00000493886 IFIT2P09913 472 aaKnown RBP16.72■□□□□ 0.27
VCP-207ENST00000493886 PLBD2Q8NHP8 589 aa16.72■□□□□ 0.27
VCP-207ENST00000493886 ARFGEF2Q9Y6D5 1785 aa16.71■□□□□ 0.27
VCP-207ENST00000493886 NBPF26B4DH59 902 aa16.71■□□□□ 0.27
VCP-207ENST00000493886 GTF2E1P29083 439 aaPredicted RBP16.71■□□□□ 0.27
VCP-207ENST00000493886 EPHA10Q5JZY3 1008 aa16.71■□□□□ 0.27
VCP-207ENST00000493886 NBPF14Q5TI25 921 aa16.71■□□□□ 0.27
VCP-207ENST00000493886 NBPF10Q6P3W6 841 aaKnown RBP16.71■□□□□ 0.27
VCP-207ENST00000493886 NBPF15Q8N660 670 aa16.71■□□□□ 0.27
VCP-207ENST00000493886 RRP9O43818 475 aaKnown RBP16.71■□□□□ 0.27
VCP-207ENST00000493886 SASH1O94885 1247 aa16.71■□□□□ 0.27
VCP-207ENST00000493886 IL25Q9H293 177 aa16.71■□□□□ 0.27
VCP-207ENST00000493886 ECHDC1Q9NTX5 307 aa16.71■□□□□ 0.27
VCP-207ENST00000493886 AFDNP55196 1824 aaKnown RBP16.71■□□□□ 0.27
VCP-207ENST00000493886 KCPQ6ZWJ8 1503 aa16.71■□□□□ 0.26
VCP-207ENST00000493886 MRE11P49959 708 aa16.7■□□□□ 0.26
VCP-207ENST00000493886 AACSQ86V21 672 aa16.7■□□□□ 0.26
VCP-207ENST00000493886 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
VCP-207ENST00000493886 PAPPAQ13219 1627 aa16.7■□□□□ 0.26
VCP-207ENST00000493886 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
VCP-207ENST00000493886 EPB41L2O43491 1005 aaKnown RBP16.69■□□□□ 0.26
VCP-207ENST00000493886 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
VCP-207ENST00000493886 ANAPC15P60006 121 aa16.69■□□□□ 0.26
VCP-207ENST00000493886 JARID2Q92833 1246 aaPredicted RBP16.69■□□□□ 0.26
VCP-207ENST00000493886 SIL1Q9H173 461 aa16.69■□□□□ 0.26
VCP-207ENST00000493886 PALD1Q9ULE6 856 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms