RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 EIF5P55010 431 aaKnown RBP15.84■□□□□ 0.13
SNX17-208ENST00000493711 API5Q9BZZ5 524 aaKnown RBP15.84■□□□□ 0.13
SNX17-208ENST00000493711 STK32BQ9NY57 414 aa15.84■□□□□ 0.13
SNX17-208ENST00000493711 LY75O60449 1722 aa15.84■□□□□ 0.13
SNX17-208ENST00000493711 HAX1O00165 279 aa15.83■□□□□ 0.12
SNX17-208ENST00000493711 TCERG1O14776 1098 aaKnown RBP15.83■□□□□ 0.12
SNX17-208ENST00000493711 BCAR3O75815 825 aa15.83■□□□□ 0.12
SNX17-208ENST00000493711 SSFA2P28290 1259 aa15.83■□□□□ 0.12
SNX17-208ENST00000493711 FLIIQ13045 1269 aa15.83■□□□□ 0.12
SNX17-208ENST00000493711 KIF6Q6ZMV9 814 aa15.83■□□□□ 0.12
SNX17-208ENST00000493711 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
SNX17-208ENST00000493711 KAT6BQ8WYB5 2073 aa15.83■□□□□ 0.12
SNX17-208ENST00000493711 PROSER3Q2NL68 480 aa15.82■□□□□ 0.12
SNX17-208ENST00000493711 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
SNX17-208ENST00000493711 COPS6Q7L5N1 327 aa15.82■□□□□ 0.12
SNX17-208ENST00000493711 LRP10Q7Z4F1 713 aa15.82■□□□□ 0.12
SNX17-208ENST00000493711 XAGE3Q8WTP9 111 aa15.82■□□□□ 0.12
SNX17-208ENST00000493711 TFCP2L1Q9NZI6 479 aa15.82■□□□□ 0.12
SNX17-208ENST00000493711 TJP1Q07157 1748 aa15.82■□□□□ 0.12
SNX17-208ENST00000493711 LAMB4A4D0S4 1761 aa15.81■□□□□ 0.12
SNX17-208ENST00000493711 ERVV-1B6SEH8 477 aa15.81■□□□□ 0.12
SNX17-208ENST00000493711 COL15A1P39059 1388 aa15.81■□□□□ 0.12
SNX17-208ENST00000493711 FKBP5Q13451 457 aaPredicted RBP15.81■□□□□ 0.12
SNX17-208ENST00000493711 TRAPPC3LQ5T215 181 aa15.81■□□□□ 0.12
SNX17-208ENST00000493711 NOB1Q9ULX3 412 aaKnown RBP15.81■□□□□ 0.12
SNX17-208ENST00000493711 ZNF330Q9Y3S2 320 aaPredicted RBP15.81■□□□□ 0.12
SNX17-208ENST00000493711 ANXA1P04083 346 aa15.8■□□□□ 0.12
SNX17-208ENST00000493711 SLC15A2Q16348 729 aa15.8■□□□□ 0.12
SNX17-208ENST00000493711 KSR2Q6VAB6 950 aa15.8■□□□□ 0.12
SNX17-208ENST00000493711 ANKRD13DQ6ZTN6 518 aa15.8■□□□□ 0.12
SNX17-208ENST00000493711 DZIP3Q86Y13 1208 aaKnown RBP15.8■□□□□ 0.12
SNX17-208ENST00000493711 PLBD2Q8NHP8 589 aa15.8■□□□□ 0.12
SNX17-208ENST00000493711 FRAT1Q92837 279 aaPredicted RBP15.8■□□□□ 0.12
SNX17-208ENST00000493711 PHAXQ9H814 394 aaKnown RBP15.8■□□□□ 0.12
SNX17-208ENST00000493711 RFC4P35249 363 aa15.79■□□□□ 0.12
SNX17-208ENST00000493711 PIP4K2AP48426 406 aaPredicted RBP15.79■□□□□ 0.12
SNX17-208ENST00000493711 EVX2Q03828 476 aa15.79■□□□□ 0.12
SNX17-208ENST00000493711 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
SNX17-208ENST00000493711 ATF7IPQ6VMQ6 1270 aa15.79■□□□□ 0.12
SNX17-208ENST00000493711 G2E3Q7L622 706 aa15.79■□□□□ 0.12
SNX17-208ENST00000493711 ZNF652Q9Y2D9 606 aa15.79■□□□□ 0.12
SNX17-208ENST00000493711 MAP3K15Q6ZN16 1313 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 C4BP0C0L5 1744 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.78■□□□□ 0.12
SNX17-208ENST00000493711 ZPR1O75312 459 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 RRP1P56182 461 aaKnown RBP15.78■□□□□ 0.12
SNX17-208ENST00000493711 PDE3AQ14432 1141 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 HSP90AB3PQ58FF7 597 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 CLEC4GQ6UXB4 293 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 RIC3Q7Z5B4 369 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 ARXQ96QS3 562 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 NARFQ9UHQ1 456 aa15.78■□□□□ 0.12
SNX17-208ENST00000493711 RREB1Q92766 1687 aa15.77■□□□□ 0.12
SNX17-208ENST00000493711 RNF123Q5XPI4 1314 aa15.77■□□□□ 0.12
SNX17-208ENST00000493711 NEXNQ0ZGT2 675 aa15.77■□□□□ 0.12
SNX17-208ENST00000493711 FKBP8Q14318 412 aa15.77■□□□□ 0.12
SNX17-208ENST00000493711 ZNF827Q17R98 1081 aa15.77■□□□□ 0.12
SNX17-208ENST00000493711 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
SNX17-208ENST00000493711 PI4KAP2A4QPH2 592 aa15.76■□□□□ 0.11
SNX17-208ENST00000493711 TTLL7Q6ZT98 887 aa15.76■□□□□ 0.11
SNX17-208ENST00000493711 FTSJ3Q8IY81 847 aaKnown RBP15.76■□□□□ 0.11
SNX17-208ENST00000493711 PI4KAP1Q8N8J0 262 aa15.76■□□□□ 0.11
SNX17-208ENST00000493711 DNAAF4Q8WXU2 420 aa15.76■□□□□ 0.11
SNX17-208ENST00000493711 COL5A3P25940 1745 aaPredicted RBP15.76■□□□□ 0.11
SNX17-208ENST00000493711 PHF14O94880 888 aa15.75■□□□□ 0.11
SNX17-208ENST00000493711 TRIM27P14373 513 aa15.75■□□□□ 0.11
SNX17-208ENST00000493711 CCT4P50991 539 aaKnown RBP15.75■□□□□ 0.11
SNX17-208ENST00000493711 GIGYF2Q6Y7W6 1299 aaKnown RBP15.75■□□□□ 0.11
SNX17-208ENST00000493711 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
SNX17-208ENST00000493711 METTL22Q9BUU2 404 aaPredicted RBP15.75■□□□□ 0.11
SNX17-208ENST00000493711 TBC1D2BQ9UPU7 963 aa15.75■□□□□ 0.11
SNX17-208ENST00000493711 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
SNX17-208ENST00000493711 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
SNX17-208ENST00000493711 USP42Q9H9J4 1324 aaKnown RBP15.74■□□□□ 0.11
SNX17-208ENST00000493711 CAMTA2O94983 1202 aa15.74■□□□□ 0.11
SNX17-208ENST00000493711 CHMP4BQ9H444 224 aaKnown RBP15.74■□□□□ 0.11
SNX17-208ENST00000493711 ZBTB3Q9H5J0 574 aa15.74■□□□□ 0.11
SNX17-208ENST00000493711 ANO8Q9HCE9 1232 aaPredicted RBP15.74■□□□□ 0.11
SNX17-208ENST00000493711 ABCC4O15439 1325 aa15.73■□□□□ 0.11
SNX17-208ENST00000493711 ALDH1L1O75891 902 aa15.73■□□□□ 0.11
SNX17-208ENST00000493711 TRIM28Q13263 835 aaKnown RBP15.73■□□□□ 0.11
SNX17-208ENST00000493711 TCIRG1Q13488 830 aa15.73■□□□□ 0.11
SNX17-208ENST00000493711 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
SNX17-208ENST00000493711 SLC16A10Q8TF71 515 aa15.73■□□□□ 0.11
SNX17-208ENST00000493711 ADCY9O60503 1353 aa15.73■□□□□ 0.11
SNX17-208ENST00000493711 IBTKQ9P2D0 1353 aaPredicted RBP15.73■□□□□ 0.11
SNX17-208ENST00000493711 PXDNLA1KZ92 1463 aa15.72■□□□□ 0.11
SNX17-208ENST00000493711 PNPLA7Q6ZV29 1317 aa15.72■□□□□ 0.11
SNX17-208ENST00000493711 INTS3Q68E01 1043 aaKnown RBP15.72■□□□□ 0.11
SNX17-208ENST00000493711 NLGN1Q8N2Q7 840 aa15.72■□□□□ 0.11
SNX17-208ENST00000493711 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
SNX17-208ENST00000493711 PPP1R1BQ9UD71 204 aaPredicted RBP15.72■□□□□ 0.11
SNX17-208ENST00000493711 ATP10DQ9P241 1426 aa15.71■□□□□ 0.11
SNX17-208ENST00000493711 F6X3S4 739 aa15.71■□□□□ 0.11
SNX17-208ENST00000493711 PARP10Q53GL7 1025 aa15.71■□□□□ 0.11
SNX17-208ENST00000493711 USPL1Q5W0Q7 1092 aa15.71■□□□□ 0.11
SNX17-208ENST00000493711 SLC4A10Q6U841 1118 aa15.71■□□□□ 0.11
SNX17-208ENST00000493711 COL23A1Q86Y22 540 aaPredicted RBP15.71■□□□□ 0.11
SNX17-208ENST00000493711 CREBZFQ9NS37 354 aa15.71■□□□□ 0.11
SNX17-208ENST00000493711 HDAC5Q9UQL6 1122 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms