RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 BRIP1Q9BX63 1249 aa19.35■□□□□ 0.69
ATG4B-223ENST00000493618 TNRC6CQ9HCJ0 1690 aaKnown RBP19.35■□□□□ 0.69
ATG4B-223ENST00000493618 DICER1Q9UPY3 1922 aaKnown RBP19.35■□□□□ 0.69
ATG4B-223ENST00000493618 PRELPP51888 382 aa19.34■□□□□ 0.69
ATG4B-223ENST00000493618 ST5P78524 1137 aa19.34■□□□□ 0.69
ATG4B-223ENST00000493618 MYBBP1AQ9BQG0 1328 aaKnown RBP19.33■□□□□ 0.69
ATG4B-223ENST00000493618 FAM177BA6PVY3 158 aa19.33■□□□□ 0.68
ATG4B-223ENST00000493618 EIF4A1P60842 406 aaKnown RBP19.33■□□□□ 0.68
ATG4B-223ENST00000493618 CCDC146Q8IYE0 955 aa19.33■□□□□ 0.68
ATG4B-223ENST00000493618 ZNF652Q9Y2D9 606 aa19.33■□□□□ 0.68
ATG4B-223ENST00000493618 RIPK4P57078 832 aa19.32■□□□□ 0.68
ATG4B-223ENST00000493618 HLFQ16534 295 aa19.32■□□□□ 0.68
ATG4B-223ENST00000493618 NBPF5PQ86XG9 351 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-223ENST00000493618 RRP7AQ9Y3A4 280 aaKnown RBP19.32■□□□□ 0.68
ATG4B-223ENST00000493618 C21orf2O43822 256 aa19.31■□□□□ 0.68
ATG4B-223ENST00000493618 IFFO2Q5TF58 517 aa19.31■□□□□ 0.68
ATG4B-223ENST00000493618 CLEC4GQ6UXB4 293 aa19.31■□□□□ 0.68
ATG4B-223ENST00000493618 NIP7Q9Y221 180 aaKnown RBP eCLIP19.31■□□□□ 0.68
ATG4B-223ENST00000493618 CEP350Q5VT06 3117 aa19.31■□□□□ 0.68
ATG4B-223ENST00000493618 NFKBIEO00221 500 aa19.3■□□□□ 0.68
ATG4B-223ENST00000493618 MYL6BP14649 208 aa19.3■□□□□ 0.68
ATG4B-223ENST00000493618 HSPA6P17066 643 aa19.3■□□□□ 0.68
ATG4B-223ENST00000493618 LMNB1P20700 586 aa19.29■□□□□ 0.68
ATG4B-223ENST00000493618 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
ATG4B-223ENST00000493618 NEUROD2Q15784 382 aa19.29■□□□□ 0.68
ATG4B-223ENST00000493618 RRAGCQ9HB90 399 aa19.29■□□□□ 0.68
ATG4B-223ENST00000493618 TSPYL4Q9UJ04 414 aa19.29■□□□□ 0.68
ATG4B-223ENST00000493618 PDZRN3Q9UPQ7 1066 aa19.29■□□□□ 0.68
ATG4B-223ENST00000493618 KDM2BQ8NHM5 1336 aa19.28■□□□□ 0.68
ATG4B-223ENST00000493618 TOMM70O94826 608 aa19.28■□□□□ 0.68
ATG4B-223ENST00000493618 SRGNP10124 158 aa19.28■□□□□ 0.68
ATG4B-223ENST00000493618 TTLL7Q6ZT98 887 aa19.28■□□□□ 0.68
ATG4B-223ENST00000493618 STYK1Q6J9G0 422 aa19.27■□□□□ 0.68
ATG4B-223ENST00000493618 PRPF40BQ6NWY9 871 aaKnown RBP19.26■□□□□ 0.67
ATG4B-223ENST00000493618 C16orf71Q8IYS4 520 aaPredicted RBP19.26■□□□□ 0.67
ATG4B-223ENST00000493618 CNKSR1Q969H4 720 aa19.26■□□□□ 0.67
ATG4B-223ENST00000493618 MASTLQ96GX5 879 aa19.26■□□□□ 0.67
ATG4B-223ENST00000493618 EIF2S2P20042 333 aaKnown RBP19.25■□□□□ 0.67
ATG4B-223ENST00000493618 WDR43Q15061 677 aaKnown RBP eCLIP19.25■□□□□ 0.67
ATG4B-223ENST00000493618 TPTE2Q6XPS3 522 aa19.25■□□□□ 0.67
ATG4B-223ENST00000493618 KIF6Q6ZMV9 814 aa19.25■□□□□ 0.67
ATG4B-223ENST00000493618 ZBTB3Q9H5J0 574 aa19.25■□□□□ 0.67
ATG4B-223ENST00000493618 WDR90Q96KV7 1748 aa19.25■□□□□ 0.67
ATG4B-223ENST00000493618 MAP3K15Q6ZN16 1313 aa19.25■□□□□ 0.67
ATG4B-223ENST00000493618 ANKRD36CQ5JPF3 1778 aa19.24■□□□□ 0.67
ATG4B-223ENST00000493618 RGL2O15211 777 aa19.23■□□□□ 0.67
ATG4B-223ENST00000493618 ANXA1P04083 346 aa19.23■□□□□ 0.67
ATG4B-223ENST00000493618 GPTP24298 496 aa19.23■□□□□ 0.67
ATG4B-223ENST00000493618 GTF2E1P29083 439 aaPredicted RBP19.23■□□□□ 0.67
ATG4B-223ENST00000493618 LMOD3Q0VAK6 560 aa19.23■□□□□ 0.67
ATG4B-223ENST00000493618 NUTM1Q86Y26 1132 aa19.23■□□□□ 0.67
ATG4B-223ENST00000493618 NECTIN2Q92692 538 aa19.23■□□□□ 0.67
ATG4B-223ENST00000493618 LAS1LQ9Y4W2 734 aaKnown RBP19.23■□□□□ 0.67
ATG4B-223ENST00000493618 ABCC12Q96J65 1359 aa19.22■□□□□ 0.67
ATG4B-223ENST00000493618 ERVV-1B6SEH8 477 aa19.22■□□□□ 0.67
ATG4B-223ENST00000493618 RBM46Q8TBY0 533 aaKnown RBP19.22■□□□□ 0.67
ATG4B-223ENST00000493618 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
ATG4B-223ENST00000493618 ADAMTS8Q9UP79 889 aa19.22■□□□□ 0.67
ATG4B-223ENST00000493618 ZC3H4Q9UPT8 1303 aaKnown RBP19.22■□□□□ 0.67
ATG4B-223ENST00000493618 GLTPD2A6NH11 291 aa19.21■□□□□ 0.67
ATG4B-223ENST00000493618 NPR1P16066 1061 aa19.21■□□□□ 0.67
ATG4B-223ENST00000493618 PROSER3Q2NL68 480 aa19.21■□□□□ 0.67
ATG4B-223ENST00000493618 ERFEQ4G0M1 354 aa19.21■□□□□ 0.67
ATG4B-223ENST00000493618 OLFM4Q6UX06 510 aa19.21■□□□□ 0.67
ATG4B-223ENST00000493618 TAOK3Q9H2K8 898 aa19.21■□□□□ 0.67
ATG4B-223ENST00000493618 PRKRIP1Q9H875 184 aaPredicted RBP19.21■□□□□ 0.67
ATG4B-223ENST00000493618 TRIM35Q9UPQ4 493 aa19.21■□□□□ 0.67
ATG4B-223ENST00000493618 UBN2Q6ZU65 1347 aa19.21■□□□□ 0.67
ATG4B-223ENST00000493618 KRT24Q2M2I5 525 aa19.2■□□□□ 0.66
ATG4B-223ENST00000493618 LAMB2P55268 1798 aa19.19■□□□□ 0.66
ATG4B-223ENST00000493618 KLRG2A4D1S0 409 aaPredicted RBP19.19■□□□□ 0.66
ATG4B-223ENST00000493618 PDIA6Q15084 440 aa19.19■□□□□ 0.66
ATG4B-223ENST00000493618 SUSD4Q5VX71 490 aa19.19■□□□□ 0.66
ATG4B-223ENST00000493618 NYXQ9GZU5 481 aa19.19■□□□□ 0.66
ATG4B-223ENST00000493618 ERBB4Q15303 1308 aa19.19■□□□□ 0.66
ATG4B-223ENST00000493618 LRP10Q7Z4F1 713 aa19.18■□□□□ 0.66
ATG4B-223ENST00000493618 C7orf43Q8WVR3 580 aa19.18■□□□□ 0.66
ATG4B-223ENST00000493618 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
ATG4B-223ENST00000493618 LTBP3Q9NS15 1303 aa19.18■□□□□ 0.66
ATG4B-223ENST00000493618 APLP1P51693 650 aa19.17■□□□□ 0.66
ATG4B-223ENST00000493618 CCDC93Q567U6 631 aa19.17■□□□□ 0.66
ATG4B-223ENST00000493618 SOGA3Q5TF21 947 aa19.17■□□□□ 0.66
ATG4B-223ENST00000493618 ZNF34Q8IZ26 560 aa19.17■□□□□ 0.66
ATG4B-223ENST00000493618 HTRA3P83110 453 aa19.16■□□□□ 0.66
ATG4B-223ENST00000493618 AIMP1Q12904 312 aaKnown RBP19.16■□□□□ 0.66
ATG4B-223ENST00000493618 GIGYF2Q6Y7W6 1299 aaKnown RBP19.16■□□□□ 0.66
ATG4B-223ENST00000493618 CHL1O00533 1208 aa19.15■□□□□ 0.66
ATG4B-223ENST00000493618 VEGFAP15692 232 aaPredicted RBP19.15■□□□□ 0.66
ATG4B-223ENST00000493618 FSTL1Q12841 308 aa19.15■□□□□ 0.66
ATG4B-223ENST00000493618 DPY19L2Q6NUT2 758 aa19.15■□□□□ 0.66
ATG4B-223ENST00000493618 POTECB2RU33 542 aa19.14■□□□□ 0.65
ATG4B-223ENST00000493618 NTSR2O95665 410 aa19.14■□□□□ 0.65
ATG4B-223ENST00000493618 ALDH1B1P30837 517 aa19.14■□□□□ 0.65
ATG4B-223ENST00000493618 COPS6Q7L5N1 327 aa19.14■□□□□ 0.65
ATG4B-223ENST00000493618 XAGE3Q8WTP9 111 aa19.14■□□□□ 0.65
ATG4B-223ENST00000493618 ZNF277Q9NRM2 450 aaPredicted RBP19.14■□□□□ 0.65
ATG4B-223ENST00000493618 IBTKQ9P2D0 1353 aaPredicted RBP19.14■□□□□ 0.65
ATG4B-223ENST00000493618 DDNO94850 711 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-223ENST00000493618 FKBP4Q02790 459 aaKnown RBP eCLIP19.13■□□□□ 0.65
ATG4B-223ENST00000493618 C3orf67Q6ZVT6 689 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms