RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 RALBP1Q15311 655 aa9.1□□□□□ -0.95
VPS52-219ENST00000493379 CC2D1BQ5T0F9 858 aaKnown RBP9.1□□□□□ -0.95
VPS52-219ENST00000493379 C3orf67Q6ZVT6 689 aa9.1□□□□□ -0.95
VPS52-219ENST00000493379 EYA1Q99502 592 aa9.1□□□□□ -0.95
VPS52-219ENST00000493379 PKD1L3Q7Z443 1732 aa9.1□□□□□ -0.95
VPS52-219ENST00000493379 IRF6O14896 467 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 FCHSD2O94868 740 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 IL2RBP14784 551 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 PPP2R1AP30153 589 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 PRIM1P49642 420 aaKnown RBP9.09□□□□□ -0.95
VPS52-219ENST00000493379 HIC1Q14526 733 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 COL23A1Q86Y22 540 aaPredicted RBP9.09□□□□□ -0.95
VPS52-219ENST00000493379 IL27Q8NEV9 243 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 CCDC102AQ96A19 550 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 NLRP2Q9NX02 1062 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 TNRC6CQ9HCJ0 1690 aaKnown RBP9.09□□□□□ -0.95
VPS52-219ENST00000493379 LTN1O94822 1766 aa9.09□□□□□ -0.95
VPS52-219ENST00000493379 C10orf71Q711Q0 1435 aa9.08□□□□□ -0.96
VPS52-219ENST00000493379 ZBTB7CA1YPR0 619 aa9.08□□□□□ -0.96
VPS52-219ENST00000493379 EXOC5O00471 708 aa9.08□□□□□ -0.96
VPS52-219ENST00000493379 TNNT2P45379 298 aaPredicted RBP9.08□□□□□ -0.96
VPS52-219ENST00000493379 KDRP35968 1356 aa9.08□□□□□ -0.96
VPS52-219ENST00000493379 PXDNLA1KZ92 1463 aa9.08□□□□□ -0.96
VPS52-219ENST00000493379 MAP2P11137 1827 aaKnown RBP9.08□□□□□ -0.96
VPS52-219ENST00000493379 RGPD5Q99666 1765 aa9.07□□□□□ -0.96
VPS52-219ENST00000493379 POTEIP0CG38 1075 aa9.07□□□□□ -0.96
VPS52-219ENST00000493379 FECHP22830 423 aa9.07□□□□□ -0.96
VPS52-219ENST00000493379 C9orf131Q5VYM1 1079 aa9.07□□□□□ -0.96
VPS52-219ENST00000493379 ARHGAP27Q6ZUM4 889 aa9.07□□□□□ -0.96
VPS52-219ENST00000493379 WBP1LQ9NX94 342 aa9.07□□□□□ -0.96
VPS52-219ENST00000493379 VIRMAQ69YN4 1812 aaKnown RBP9.07□□□□□ -0.96
VPS52-219ENST00000493379 PPM1GO15355 546 aaPredicted RBP9.06□□□□□ -0.96
VPS52-219ENST00000493379 LTV1Q96GA3 475 aaPredicted RBP9.06□□□□□ -0.96
VPS52-219ENST00000493379 PRKRIP1Q9H875 184 aaPredicted RBP9.06□□□□□ -0.96
VPS52-219ENST00000493379 A0A0C4DFX4 3053 aa9.06□□□□□ -0.96
VPS52-219ENST00000493379 FAM208AQ9UK61 1670 aaKnown RBP9.05□□□□□ -0.96
VPS52-219ENST00000493379 COL3A1P02461 1466 aaPredicted RBP9.05□□□□□ -0.96
VPS52-219ENST00000493379 CNTNAP1P78357 1384 aa9.05□□□□□ -0.96
VPS52-219ENST00000493379 DIAPH1O60610 1272 aaKnown RBP9.05□□□□□ -0.96
VPS52-219ENST00000493379 VEGFBP49765 207 aa9.05□□□□□ -0.96
VPS52-219ENST00000493379 PTGDRQ13258 359 aa9.05□□□□□ -0.96
VPS52-219ENST00000493379 AMHR2Q16671 573 aa9.05□□□□□ -0.96
VPS52-219ENST00000493379 SMIM5Q71RC9 77 aa9.05□□□□□ -0.96
VPS52-219ENST00000493379 ZCRB1Q8TBF4 217 aaKnown RBP9.05□□□□□ -0.96
VPS52-219ENST00000493379 KDM2BQ8NHM5 1336 aa9.05□□□□□ -0.96
VPS52-219ENST00000493379 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
VPS52-219ENST00000493379 SOX10P56693 466 aa9.04□□□□□ -0.96
VPS52-219ENST00000493379 RAPGEF4Q8WZA2 1011 aa9.04□□□□□ -0.96
VPS52-219ENST00000493379 BCS1LQ9Y276 419 aa9.04□□□□□ -0.96
VPS52-219ENST00000493379 TATP17735 454 aaPredicted RBP9.03□□□□□ -0.96
VPS52-219ENST00000493379 POTEHQ6S545 545 aa9.03□□□□□ -0.96
VPS52-219ENST00000493379 FAM117AQ9C073 453 aa9.03□□□□□ -0.96
VPS52-219ENST00000493379 MCOLN1Q9GZU1 580 aa9.03□□□□□ -0.96
VPS52-219ENST00000493379 MEGF6O75095 1541 aa9.03□□□□□ -0.96
VPS52-219ENST00000493379 CYP27B1O15528 508 aa9.02□□□□□ -0.97
VPS52-219ENST00000493379 AMOTQ4VCS5 1084 aa9.02□□□□□ -0.97
VPS52-219ENST00000493379 HABP4Q5JVS0 413 aaKnown RBP9.02□□□□□ -0.97
VPS52-219ENST00000493379 PARP9Q8IXQ6 854 aa9.02□□□□□ -0.97
VPS52-219ENST00000493379 USHBP1Q8N6Y0 703 aa9.02□□□□□ -0.97
VPS52-219ENST00000493379 CFAP53Q96M91 514 aa9.02□□□□□ -0.97
VPS52-219ENST00000493379 KIAA1551Q9HCM1 1747 aa9.02□□□□□ -0.97
VPS52-219ENST00000493379 MYBBP1AQ9BQG0 1328 aaKnown RBP9.02□□□□□ -0.97
VPS52-219ENST00000493379 PHF14O94880 888 aa9.01□□□□□ -0.97
VPS52-219ENST00000493379 SULT6B1Q6IMI4 303 aa9.01□□□□□ -0.97
VPS52-219ENST00000493379 EPAS1Q99814 870 aa9.01□□□□□ -0.97
VPS52-219ENST00000493379 TSKSQ9UJT2 592 aa9.01□□□□□ -0.97
VPS52-219ENST00000493379 SPG7Q9UQ90 795 aa9.01□□□□□ -0.97
VPS52-219ENST00000493379 NUDCQ9Y266 331 aa9.01□□□□□ -0.97
VPS52-219ENST00000493379 PLEKHO1Q53GL0 409 aaPredicted RBP9□□□□□ -0.97
VPS52-219ENST00000493379 AEBP1Q8IUX7 1158 aa9□□□□□ -0.97
VPS52-219ENST00000493379 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
VPS52-219ENST00000493379 EIF2AK3Q9NZJ5 1116 aaKnown RBP9□□□□□ -0.97
VPS52-219ENST00000493379 RNF181Q9P0P0 153 aa9□□□□□ -0.97
VPS52-219ENST00000493379 CASP8AP2Q9UKL3 1982 aa9□□□□□ -0.97
VPS52-219ENST00000493379 PCDH11XQ9BZA7 1347 aa9□□□□□ -0.97
VPS52-219ENST00000493379 PCDH11YQ9BZA8 1340 aa9□□□□□ -0.97
VPS52-219ENST00000493379 PHKG2P15735 406 aa8.99□□□□□ -0.97
VPS52-219ENST00000493379 IFNL2Q8IZJ0 200 aa8.99□□□□□ -0.97
VPS52-219ENST00000493379 MPNDQ8N594 471 aa8.99□□□□□ -0.97
VPS52-219ENST00000493379 DDRGK1Q96HY6 314 aa8.99□□□□□ -0.97
VPS52-219ENST00000493379 PLEKHF1Q96S99 279 aa8.99□□□□□ -0.97
VPS52-219ENST00000493379 RSPH6AQ9H0K4 717 aa8.99□□□□□ -0.97
VPS52-219ENST00000493379 CDHR5Q9HBB8 845 aa8.99□□□□□ -0.97
VPS52-219ENST00000493379 RGPD2P0DJD1 1756 aa8.99□□□□□ -0.97
VPS52-219ENST00000493379 SBF1O95248 1867 aa8.98□□□□□ -0.97
VPS52-219ENST00000493379 SLC27A3Q5K4L6 730 aa8.98□□□□□ -0.97
VPS52-219ENST00000493379 DDX54Q8TDD1 881 aaKnown RBP8.98□□□□□ -0.97
VPS52-219ENST00000493379 PCDHGA4Q9Y5G9 962 aa8.98□□□□□ -0.97
VPS52-219ENST00000493379 PCDHGA10Q9Y5H3 936 aa8.98□□□□□ -0.97
VPS52-219ENST00000493379 PITPNM2Q9BZ72 1349 aa8.98□□□□□ -0.97
VPS52-219ENST00000493379 A0A0G2JLW4 131 aa8.97□□□□□ -0.97
VPS52-219ENST00000493379 ERVV-2B6SEH9 535 aa8.97□□□□□ -0.97
VPS52-219ENST00000493379 MAP3K7O43318 606 aa8.97□□□□□ -0.97
VPS52-219ENST00000493379 HSP90AB1P08238 724 aaKnown RBP8.97□□□□□ -0.97
VPS52-219ENST00000493379 AKAP4Q5JQC9 854 aa8.97□□□□□ -0.97
VPS52-219ENST00000493379 DCAF5Q96JK2 942 aa8.97□□□□□ -0.97
VPS52-219ENST00000493379 SZT2Q5T011 3432 aa8.97□□□□□ -0.97
VPS52-219ENST00000493379 HMOX1P09601 288 aa8.96□□□□□ -0.98
VPS52-219ENST00000493379 FXR1P51114 621 aaKnown RBP eCLIP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms