RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 FRAT1Q92837 279 aaPredicted RBP11.96□□□□□ -0.49
CSTF1-206ENST00000493039 RREB1Q92766 1687 aa11.96□□□□□ -0.49
CSTF1-206ENST00000493039 C4BP0C0L5 1744 aa11.96□□□□□ -0.49
CSTF1-206ENST00000493039 RLBP1P12271 317 aa11.96□□□□□ -0.49
CSTF1-206ENST00000493039 RRP1P56182 461 aaKnown RBP11.96□□□□□ -0.49
CSTF1-206ENST00000493039 ADCY9O60503 1353 aa11.96□□□□□ -0.5
CSTF1-206ENST00000493039 F6X3S4 739 aa11.95□□□□□ -0.5
CSTF1-206ENST00000493039 ARHGAP45Q92619 1136 aa11.95□□□□□ -0.5
CSTF1-206ENST00000493039 ZNF330Q9Y3S2 320 aaPredicted RBP11.95□□□□□ -0.5
CSTF1-206ENST00000493039 PI4KAP2A4QPH2 592 aa11.95□□□□□ -0.5
CSTF1-206ENST00000493039 ATF7IPQ6VMQ6 1270 aa11.95□□□□□ -0.5
CSTF1-206ENST00000493039 PI4KAP1Q8N8J0 262 aa11.95□□□□□ -0.5
CSTF1-206ENST00000493039 ARHGEF1Q92888 912 aaKnown RBP11.95□□□□□ -0.5
CSTF1-206ENST00000493039 TBC1D2BQ9UPU7 963 aa11.95□□□□□ -0.5
CSTF1-206ENST00000493039 KIF16BQ96L93 1317 aa11.94□□□□□ -0.5
CSTF1-206ENST00000493039 FKBP5Q13451 457 aaPredicted RBP11.94□□□□□ -0.5
CSTF1-206ENST00000493039 PTPRCP08575 1304 aa11.94□□□□□ -0.5
CSTF1-206ENST00000493039 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
CSTF1-206ENST00000493039 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
CSTF1-206ENST00000493039 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
CSTF1-206ENST00000493039 CLUAP1Q96AJ1 413 aa11.94□□□□□ -0.5
CSTF1-206ENST00000493039 AK7Q96M32 723 aa11.94□□□□□ -0.5
CSTF1-206ENST00000493039 RTCBQ9Y3I0 505 aaKnown RBP11.94□□□□□ -0.5
CSTF1-206ENST00000493039 SRCAPQ6ZRS2 3230 aa11.93□□□□□ -0.5
CSTF1-206ENST00000493039 COL15A1P39059 1388 aa11.93□□□□□ -0.5
CSTF1-206ENST00000493039 CAMTA2O94983 1202 aa11.93□□□□□ -0.5
CSTF1-206ENST00000493039 SLC15A2Q16348 729 aa11.93□□□□□ -0.5
CSTF1-206ENST00000493039 HLFQ16534 295 aa11.93□□□□□ -0.5
CSTF1-206ENST00000493039 KSR2Q6VAB6 950 aa11.93□□□□□ -0.5
CSTF1-206ENST00000493039 PANK1Q8TE04 598 aa11.93□□□□□ -0.5
CSTF1-206ENST00000493039 PHF14O94880 888 aa11.92□□□□□ -0.5
CSTF1-206ENST00000493039 DZIP3Q86Y13 1208 aaKnown RBP11.92□□□□□ -0.5
CSTF1-206ENST00000493039 ZBTB3Q9H5J0 574 aa11.92□□□□□ -0.5
CSTF1-206ENST00000493039 BCL2L12Q9HB09 334 aa11.92□□□□□ -0.5
CSTF1-206ENST00000493039 MAP3K2Q9Y2U5 619 aa11.92□□□□□ -0.5
CSTF1-206ENST00000493039 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
CSTF1-206ENST00000493039 PLBD2Q8NHP8 589 aa11.92□□□□□ -0.5
CSTF1-206ENST00000493039 PDGFDQ9GZP0 370 aaPredicted RBP11.92□□□□□ -0.5
CSTF1-206ENST00000493039 TFCP2L1Q9NZI6 479 aa11.92□□□□□ -0.5
CSTF1-206ENST00000493039 SRP68Q9UHB9 627 aaKnown RBP11.92□□□□□ -0.5
CSTF1-206ENST00000493039 ABCC4O15439 1325 aa11.92□□□□□ -0.5
CSTF1-206ENST00000493039 MAP3K15Q6ZN16 1313 aa11.92□□□□□ -0.5
CSTF1-206ENST00000493039 SSFA2P28290 1259 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 TRAPPC3LQ5T215 181 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 ERICH6BQ5W0A0 696 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
CSTF1-206ENST00000493039 CACNA1FO60840 1977 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 PNPLA7Q6ZV29 1317 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 UBR3Q6ZT12 1888 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 IGKV5-2P06315 115 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 DNAAF4Q8WXU2 420 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 API5Q9BZZ5 524 aaKnown RBP11.91□□□□□ -0.5
CSTF1-206ENST00000493039 NARFQ9UHQ1 456 aa11.91□□□□□ -0.5
CSTF1-206ENST00000493039 ERVV-1B6SEH8 477 aa11.9□□□□□ -0.5
CSTF1-206ENST00000493039 ADRA2BP18089 450 aa11.9□□□□□ -0.5
CSTF1-206ENST00000493039 PDE3AQ14432 1141 aa11.9□□□□□ -0.5
CSTF1-206ENST00000493039 BEND3Q5T5X7 828 aa11.9□□□□□ -0.5
CSTF1-206ENST00000493039 GIGYF2Q6Y7W6 1299 aaKnown RBP11.9□□□□□ -0.5
CSTF1-206ENST00000493039 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
CSTF1-206ENST00000493039 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
CSTF1-206ENST00000493039 TMEM57Q8N5G2 664 aa11.9□□□□□ -0.5
CSTF1-206ENST00000493039 METTL22Q9BUU2 404 aaPredicted RBP11.9□□□□□ -0.5
CSTF1-206ENST00000493039 IRX6P78412 446 aaPredicted RBP11.9□□□□□ -0.51
CSTF1-206ENST00000493039 USPL1Q5W0Q7 1092 aa11.9□□□□□ -0.51
CSTF1-206ENST00000493039 USP42Q9H9J4 1324 aaKnown RBP11.89□□□□□ -0.51
CSTF1-206ENST00000493039 A0A087WZG4 1122 aa11.89□□□□□ -0.51
CSTF1-206ENST00000493039 DDX58O95786 925 aaKnown RBP11.89□□□□□ -0.51
CSTF1-206ENST00000493039 HMGB2P26583 209 aaKnown RBP11.89□□□□□ -0.51
CSTF1-206ENST00000493039 AAMPQ13685 434 aa11.89□□□□□ -0.51
CSTF1-206ENST00000493039 INTS3Q68E01 1043 aaKnown RBP11.89□□□□□ -0.51
CSTF1-206ENST00000493039 SLC4A10Q6U841 1118 aa11.89□□□□□ -0.51
CSTF1-206ENST00000493039 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 RFC4P35249 363 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 TCIRG1Q13488 830 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 CWF19L2Q2TBE0 894 aaKnown RBP11.88□□□□□ -0.51
CSTF1-206ENST00000493039 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-206ENST00000493039 STK32BQ9NY57 414 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 GYS1P13807 737 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 CDK11BP21127 795 aaKnown RBP11.88□□□□□ -0.51
CSTF1-206ENST00000493039 MYD88Q99836 296 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 ISCA1Q9BUE6 129 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 COG6Q9Y2V7 657 aa11.88□□□□□ -0.51
CSTF1-206ENST00000493039 FKBP8Q14318 412 aa11.87□□□□□ -0.51
CSTF1-206ENST00000493039 CLEC4GQ6UXB4 293 aa11.87□□□□□ -0.51
CSTF1-206ENST00000493039 ZNF34Q8IZ26 560 aa11.87□□□□□ -0.51
CSTF1-206ENST00000493039 TUBGCP6Q96RT7 1819 aa11.87□□□□□ -0.51
CSTF1-206ENST00000493039 TRIM28Q13263 835 aaKnown RBP11.87□□□□□ -0.51
CSTF1-206ENST00000493039 LINS1Q8NG48 757 aa11.87□□□□□ -0.51
CSTF1-206ENST00000493039 UBN2Q6ZU65 1347 aa11.87□□□□□ -0.51
CSTF1-206ENST00000493039 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 NEURL1BA8MQ27 555 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 ZPR1O75312 459 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 TBC1D9BQ66K14 1250 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 FTSJ3Q8IY81 847 aaKnown RBP11.86□□□□□ -0.51
CSTF1-206ENST00000493039 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
CSTF1-206ENST00000493039 ZBTB7BO15156 539 aaPredicted RBP11.86□□□□□ -0.51
CSTF1-206ENST00000493039 RGL2O15211 777 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms