RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PCDHB15Q9Y5E8 787 aa17.74■□□□□ 0.43
PDZRN3-210ENST00000492909 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
PDZRN3-210ENST00000492909 COL5A3P25940 1745 aaPredicted RBP17.73■□□□□ 0.43
PDZRN3-210ENST00000492909 PLSCR1O15162 318 aa17.73■□□□□ 0.43
PDZRN3-210ENST00000492909 BEND3Q5T5X7 828 aa17.73■□□□□ 0.43
PDZRN3-210ENST00000492909 LY75O60449 1722 aa17.73■□□□□ 0.43
PDZRN3-210ENST00000492909 ITPK1Q13572 414 aa17.71■□□□□ 0.43
PDZRN3-210ENST00000492909 PLBD2Q8NHP8 589 aa17.71■□□□□ 0.43
PDZRN3-210ENST00000492909 RREB1Q92766 1687 aa17.71■□□□□ 0.43
PDZRN3-210ENST00000492909 NUP188Q5SRE5 1749 aa17.71■□□□□ 0.43
PDZRN3-210ENST00000492909 MEIS3Q99687 375 aa17.71■□□□□ 0.43
PDZRN3-210ENST00000492909 ZBTB1Q9Y2K1 713 aa17.71■□□□□ 0.43
PDZRN3-210ENST00000492909 MYH14Q7Z406 1995 aaKnown RBP17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 ALDH1L1O75891 902 aa17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 TXNRD1Q16881 649 aa17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 CENPQQ7L2Z9 268 aaPredicted RBP17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 LINS1Q8NG48 757 aa17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 METTL22Q9BUU2 404 aaPredicted RBP17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 CCDC87Q9NVE4 849 aa17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 ZNF330Q9Y3S2 320 aaPredicted RBP17.7■□□□□ 0.42
PDZRN3-210ENST00000492909 KDM2BQ8NHM5 1336 aa17.69■□□□□ 0.42
PDZRN3-210ENST00000492909 GNAI3P08754 354 aa17.69■□□□□ 0.42
PDZRN3-210ENST00000492909 CRKLP46109 303 aaKnown RBP17.69■□□□□ 0.42
PDZRN3-210ENST00000492909 TTLL7Q6ZT98 887 aa17.69■□□□□ 0.42
PDZRN3-210ENST00000492909 MSH5O43196 834 aa17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 NPM2Q86SE8 214 aaKnown RBP17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 RWDD1Q9H446 243 aaPredicted RBP17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 C1orf115Q9H7X2 142 aa17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 LRRC4BQ9NT99 713 aa17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 AFDNP55196 1824 aaKnown RBP17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 IGHDP01880 384 aa17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 USP44Q9H0E7 712 aa17.68■□□□□ 0.42
PDZRN3-210ENST00000492909 TAF1LQ8IZX4 1826 aa17.67■□□□□ 0.42
PDZRN3-210ENST00000492909 KIF6Q6ZMV9 814 aa17.67■□□□□ 0.42
PDZRN3-210ENST00000492909 CCNL1Q9UK58 526 aaPredicted RBP17.67■□□□□ 0.42
PDZRN3-210ENST00000492909 RGPD3A6NKT7 1758 aaPredicted RBP17.67■□□□□ 0.42
PDZRN3-210ENST00000492909 RGPD4Q7Z3J3 1758 aa17.67■□□□□ 0.42
PDZRN3-210ENST00000492909 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 CWF19L2Q2TBE0 894 aaKnown RBP17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 MYD88Q99836 296 aa17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 GNAI2P04899 355 aa17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 IGKV5-2P06315 115 aa17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 UBTFL1P0CB47 393 aaPredicted RBP17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 ZBTB3Q9H5J0 574 aa17.66■□□□□ 0.42
PDZRN3-210ENST00000492909 NEURL1BA8MQ27 555 aa17.65■□□□□ 0.42
PDZRN3-210ENST00000492909 CNTNAP4Q9C0A0 1308 aa17.65■□□□□ 0.42
PDZRN3-210ENST00000492909 EIF5P55010 431 aaKnown RBP17.64■□□□□ 0.41
PDZRN3-210ENST00000492909 ARXQ96QS3 562 aa17.64■□□□□ 0.41
PDZRN3-210ENST00000492909 C9orf78Q9NZ63 289 aaPredicted RBP17.64■□□□□ 0.41
PDZRN3-210ENST00000492909 MAP3K15Q6ZN16 1313 aa17.64■□□□□ 0.41
PDZRN3-210ENST00000492909 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
PDZRN3-210ENST00000492909 NUP98P52948 1817 aa17.63■□□□□ 0.41
PDZRN3-210ENST00000492909 NBPF7P0C2Y1 421 aaPredicted RBP17.63■□□□□ 0.41
PDZRN3-210ENST00000492909 RC3H1Q5TC82 1133 aaKnown RBP17.63■□□□□ 0.41
PDZRN3-210ENST00000492909 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
PDZRN3-210ENST00000492909 HDAC5Q9UQL6 1122 aa17.63■□□□□ 0.41
PDZRN3-210ENST00000492909 ANKRD36CQ5JPF3 1778 aa17.62■□□□□ 0.41
PDZRN3-210ENST00000492909 GRM8O00222 908 aa17.62■□□□□ 0.41
PDZRN3-210ENST00000492909 GCKRQ14397 625 aa17.62■□□□□ 0.41
PDZRN3-210ENST00000492909 SLC27A3Q5K4L6 730 aa17.62■□□□□ 0.41
PDZRN3-210ENST00000492909 CEP85Q6P2H3 762 aa17.62■□□□□ 0.41
PDZRN3-210ENST00000492909 DZIP3Q86Y13 1208 aaKnown RBP17.62■□□□□ 0.41
PDZRN3-210ENST00000492909 ANKRD44Q8N8A2 993 aa17.62■□□□□ 0.41
PDZRN3-210ENST00000492909 LRRFIP2Q9Y608 721 aaKnown RBP17.62■□□□□ 0.41
PDZRN3-210ENST00000492909 ATP5J2-PTCD1G3V325 749 aa17.61■□□□□ 0.41
PDZRN3-210ENST00000492909 SIRT2Q8IXJ6 389 aa17.61■□□□□ 0.41
PDZRN3-210ENST00000492909 UTYO14607 1347 aa17.61■□□□□ 0.41
PDZRN3-210ENST00000492909 ERVV-1B6SEH8 477 aa17.61■□□□□ 0.41
PDZRN3-210ENST00000492909 TCIRG1Q13488 830 aa17.61■□□□□ 0.41
PDZRN3-210ENST00000492909 GIGYF2Q6Y7W6 1299 aaKnown RBP17.61■□□□□ 0.41
PDZRN3-210ENST00000492909 TBC1D2BQ9UPU7 963 aa17.61■□□□□ 0.41
PDZRN3-210ENST00000492909 C4BP0C0L5 1744 aa17.61■□□□□ 0.41
PDZRN3-210ENST00000492909 COL15A1P39059 1388 aa17.6■□□□□ 0.41
PDZRN3-210ENST00000492909 ZNF827Q17R98 1081 aa17.59■□□□□ 0.41
PDZRN3-210ENST00000492909 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
PDZRN3-210ENST00000492909 A0A087WZG4 1122 aa17.58■□□□□ 0.41
PDZRN3-210ENST00000492909 HMMRO75330 724 aa17.58■□□□□ 0.41
PDZRN3-210ENST00000492909 HLFQ16534 295 aa17.58■□□□□ 0.41
PDZRN3-210ENST00000492909 CCDC191Q8NCU4 936 aa17.58■□□□□ 0.41
PDZRN3-210ENST00000492909 CWC25Q9NXE8 425 aaPredicted RBP17.58■□□□□ 0.41
PDZRN3-210ENST00000492909 PSDA5PKW4 1024 aaPredicted RBP17.58■□□□□ 0.4
PDZRN3-210ENST00000492909 RPS6KA4O75676 772 aa17.58■□□□□ 0.4
PDZRN3-210ENST00000492909 HMGB2P26583 209 aaKnown RBP17.58■□□□□ 0.4
PDZRN3-210ENST00000492909 TRIM28Q13263 835 aaKnown RBP17.58■□□□□ 0.4
PDZRN3-210ENST00000492909 SMC5Q8IY18 1101 aa17.58■□□□□ 0.4
PDZRN3-210ENST00000492909 ISCA1Q9BUE6 129 aa17.58■□□□□ 0.4
PDZRN3-210ENST00000492909 BCORQ6W2J9 1755 aa17.57■□□□□ 0.4
PDZRN3-210ENST00000492909 GNPATO15228 680 aa17.57■□□□□ 0.4
PDZRN3-210ENST00000492909 R3HDM1Q15032 1099 aaKnown RBP17.57■□□□□ 0.4
PDZRN3-210ENST00000492909 SMIM5Q71RC9 77 aa17.57■□□□□ 0.4
PDZRN3-210ENST00000492909 ATP8B2P98198 1209 aa17.56■□□□□ 0.4
PDZRN3-210ENST00000492909 GCC1Q96CN9 775 aa17.56■□□□□ 0.4
PDZRN3-210ENST00000492909 RTCBQ9Y3I0 505 aaKnown RBP17.56■□□□□ 0.4
PDZRN3-210ENST00000492909 CAMTA2O94983 1202 aa17.56■□□□□ 0.4
PDZRN3-210ENST00000492909 UBE3BQ7Z3V4 1068 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms