RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 ILDR1Q86SU0 546 aaPredicted RBP16.3■□□□□ 0.2
LSS-210ENST00000491729 HSCBQ8IWL3 235 aa16.3■□□□□ 0.2
LSS-210ENST00000491729 XAGE3Q8WTP9 111 aa16.3■□□□□ 0.2
LSS-210ENST00000491729 CYP19A1P11511 503 aaPredicted RBP16.29■□□□□ 0.2
LSS-210ENST00000491729 RXRBP28702 533 aa16.29■□□□□ 0.2
LSS-210ENST00000491729 INTS3Q68E01 1043 aaKnown RBP16.29■□□□□ 0.2
LSS-210ENST00000491729 PALLDQ8WX93 1383 aa16.28■□□□□ 0.2
LSS-210ENST00000491729 LOC102724428A0A0B4J2F2 783 aa16.28■□□□□ 0.2
LSS-210ENST00000491729 SIK1P57059 783 aa16.28■□□□□ 0.2
LSS-210ENST00000491729 ANKRD45Q5TZF3 282 aa16.28■□□□□ 0.2
LSS-210ENST00000491729 SMIM5Q71RC9 77 aa16.28■□□□□ 0.2
LSS-210ENST00000491729 TTLL7Q6ZT98 887 aa16.28■□□□□ 0.2
LSS-210ENST00000491729 C1orf115Q9H7X2 142 aa16.28■□□□□ 0.2
LSS-210ENST00000491729 VSIG10Q8N0Z9 540 aa16.27■□□□□ 0.2
LSS-210ENST00000491729 BTAF1O14981 1849 aa16.27■□□□□ 0.19
LSS-210ENST00000491729 TJP1Q07157 1748 aa16.27■□□□□ 0.19
LSS-210ENST00000491729 SNX21Q969T3 373 aa16.27■□□□□ 0.19
LSS-210ENST00000491729 HYPKQ9NX55 129 aa16.27■□□□□ 0.19
LSS-210ENST00000491729 MYH14Q7Z406 1995 aaKnown RBP16.26■□□□□ 0.19
LSS-210ENST00000491729 TRIM37O94972 964 aa16.26■□□□□ 0.19
LSS-210ENST00000491729 ATP6V1AP38606 617 aa16.26■□□□□ 0.19
LSS-210ENST00000491729 MEIS3Q99687 375 aa16.26■□□□□ 0.19
LSS-210ENST00000491729 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
LSS-210ENST00000491729 ZBTB1Q9Y2K1 713 aa16.26■□□□□ 0.19
LSS-210ENST00000491729 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
LSS-210ENST00000491729 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
LSS-210ENST00000491729 INTS5Q6P9B9 1019 aaKnown RBP16.25■□□□□ 0.19
LSS-210ENST00000491729 ATP10DQ9P241 1426 aa16.25■□□□□ 0.19
LSS-210ENST00000491729 BEND3Q5T5X7 828 aa16.25■□□□□ 0.19
LSS-210ENST00000491729 KSR2Q6VAB6 950 aa16.24■□□□□ 0.19
LSS-210ENST00000491729 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
LSS-210ENST00000491729 SIRT2Q8IXJ6 389 aa16.24■□□□□ 0.19
LSS-210ENST00000491729 NHSQ6T4R5 1651 aa16.24■□□□□ 0.19
LSS-210ENST00000491729 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
LSS-210ENST00000491729 RPAP2Q8IXW5 612 aaPredicted RBP16.24■□□□□ 0.19
LSS-210ENST00000491729 LINC00116Q8NCU8 138 aa16.24■□□□□ 0.19
LSS-210ENST00000491729 DNAAF4Q8WXU2 420 aa16.24■□□□□ 0.19
LSS-210ENST00000491729 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
LSS-210ENST00000491729 USP44Q9H0E7 712 aa16.23■□□□□ 0.19
LSS-210ENST00000491729 DCTPP1Q9H773 170 aa16.23■□□□□ 0.19
LSS-210ENST00000491729 LRRC4BQ9NT99 713 aa16.23■□□□□ 0.19
LSS-210ENST00000491729 CDC45O75419 566 aa16.22■□□□□ 0.19
LSS-210ENST00000491729 FAM196AQ6ZSG2 479 aa16.22■□□□□ 0.19
LSS-210ENST00000491729 BCL11BQ9C0K0 894 aaPredicted RBP16.22■□□□□ 0.19
LSS-210ENST00000491729 ZNF330Q9Y3S2 320 aaPredicted RBP16.22■□□□□ 0.19
LSS-210ENST00000491729 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
LSS-210ENST00000491729 ANKRD13DQ6ZTN6 518 aa16.22■□□□□ 0.19
LSS-210ENST00000491729 PROM2Q8N271 834 aa16.22■□□□□ 0.19
LSS-210ENST00000491729 ANKRD44Q8N8A2 993 aa16.22■□□□□ 0.19
LSS-210ENST00000491729 STARD3NLO95772 234 aa16.21■□□□□ 0.18
LSS-210ENST00000491729 NBPF7P0C2Y1 421 aaPredicted RBP16.2■□□□□ 0.18
LSS-210ENST00000491729 JARID2Q92833 1246 aaPredicted RBP16.2■□□□□ 0.18
LSS-210ENST00000491729 SMARCC1Q92922 1105 aaPredicted RBP16.2■□□□□ 0.18
LSS-210ENST00000491729 TEX13AQ9BXU3 409 aaPredicted RBP16.2■□□□□ 0.18
LSS-210ENST00000491729 ZBTB3Q9H5J0 574 aa16.2■□□□□ 0.18
LSS-210ENST00000491729 CIZ1Q9ULV3 898 aaPredicted RBP16.2■□□□□ 0.18
LSS-210ENST00000491729 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
LSS-210ENST00000491729 TBC1D9Q6ZT07 1266 aa16.19■□□□□ 0.18
LSS-210ENST00000491729 RIC3Q7Z5B4 369 aa16.19■□□□□ 0.18
LSS-210ENST00000491729 ERBB4Q15303 1308 aa16.19■□□□□ 0.18
LSS-210ENST00000491729 CCT4P50991 539 aaKnown RBP16.19■□□□□ 0.18
LSS-210ENST00000491729 HLFQ16534 295 aa16.19■□□□□ 0.18
LSS-210ENST00000491729 HMMRO75330 724 aa16.18■□□□□ 0.18
LSS-210ENST00000491729 L1TD1Q5T7N2 865 aaKnown RBP16.18■□□□□ 0.18
LSS-210ENST00000491729 CHMP4AQ9BY43 222 aa16.18■□□□□ 0.18
LSS-210ENST00000491729 TBC1D2BQ9UPU7 963 aa16.18■□□□□ 0.18
LSS-210ENST00000491729 MCM4P33991 863 aa16.18■□□□□ 0.18
LSS-210ENST00000491729 EIF5P55010 431 aaKnown RBP16.18■□□□□ 0.18
LSS-210ENST00000491729 MYD88Q99836 296 aa16.18■□□□□ 0.18
LSS-210ENST00000491729 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
LSS-210ENST00000491729 SRCIN1Q9C0H9 1055 aa16.18■□□□□ 0.18
LSS-210ENST00000491729 PXDNLA1KZ92 1463 aa16.17■□□□□ 0.18
LSS-210ENST00000491729 DDX11L8A8MPP1 907 aa16.17■□□□□ 0.18
LSS-210ENST00000491729 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
LSS-210ENST00000491729 PLBD2Q8NHP8 589 aa16.17■□□□□ 0.18
LSS-210ENST00000491729 CCDC87Q9NVE4 849 aa16.17■□□□□ 0.18
LSS-210ENST00000491729 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
LSS-210ENST00000491729 PLEKHM2Q8IWE5 1019 aa16.16■□□□□ 0.18
LSS-210ENST00000491729 CCNL1Q9UK58 526 aaPredicted RBP16.16■□□□□ 0.18
LSS-210ENST00000491729 TUBGCP6Q96RT7 1819 aa16.16■□□□□ 0.18
LSS-210ENST00000491729 COL5A3P25940 1745 aaPredicted RBP16.16■□□□□ 0.18
LSS-210ENST00000491729 ARXQ96QS3 562 aa16.16■□□□□ 0.18
LSS-210ENST00000491729 LY75O60449 1722 aa16.16■□□□□ 0.18
LSS-210ENST00000491729 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
LSS-210ENST00000491729 NEURL1BA8MQ27 555 aa16.15■□□□□ 0.18
LSS-210ENST00000491729 DDIT3P35638 169 aa16.15■□□□□ 0.18
LSS-210ENST00000491729 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
LSS-210ENST00000491729 KAZALD1Q96I82 304 aa16.15■□□□□ 0.18
LSS-210ENST00000491729 DDX58O95786 925 aaKnown RBP16.15■□□□□ 0.18
LSS-210ENST00000491729 PTMSP20962 102 aa16.15■□□□□ 0.18
LSS-210ENST00000491729 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
LSS-210ENST00000491729 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
LSS-210ENST00000491729 GSPT1P15170 499 aaKnown RBP16.14■□□□□ 0.17
LSS-210ENST00000491729 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
LSS-210ENST00000491729 CICQ96RK0 1608 aaPredicted RBP16.14■□□□□ 0.17
LSS-210ENST00000491729 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
LSS-210ENST00000491729 RREB1Q92766 1687 aa16.13■□□□□ 0.17
LSS-210ENST00000491729 GCKRQ14397 625 aa16.13■□□□□ 0.17
LSS-210ENST00000491729 SYNE4Q8N205 404 aa16.13■□□□□ 0.17
LSS-210ENST00000491729 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms