RNA–Protein interactions for RNA: ENST00000491464.1

HDAC7-225, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-225ENST00000491464 COL11A2P13942 1736 aaPredicted RBP12.82□□□□□ -0.36
HDAC7-225ENST00000491464 KIF3CO14782 793 aa12.81□□□□□ -0.36
HDAC7-225ENST00000491464 TMPOP42166 694 aaKnown RBP12.81□□□□□ -0.36
HDAC7-225ENST00000491464 RASSF7Q02833 373 aa12.81□□□□□ -0.36
HDAC7-225ENST00000491464 KIF6Q6ZMV9 814 aa12.81□□□□□ -0.36
HDAC7-225ENST00000491464 NGEFQ8N5V2 710 aa12.81□□□□□ -0.36
HDAC7-225ENST00000491464 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
HDAC7-225ENST00000491464 RRP7AQ9Y3A4 280 aaKnown RBP12.81□□□□□ -0.36
HDAC7-225ENST00000491464 KDM2BQ8NHM5 1336 aa12.81□□□□□ -0.36
HDAC7-225ENST00000491464 CACNA1SQ13698 1873 aa12.8□□□□□ -0.36
HDAC7-225ENST00000491464 LMNB1P20700 586 aa12.8□□□□□ -0.36
HDAC7-225ENST00000491464 TPTE2Q6XPS3 522 aa12.8□□□□□ -0.36
HDAC7-225ENST00000491464 CCDC146Q8IYE0 955 aa12.8□□□□□ -0.36
HDAC7-225ENST00000491464 C16orf71Q8IYS4 520 aaPredicted RBP12.8□□□□□ -0.36
HDAC7-225ENST00000491464 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
HDAC7-225ENST00000491464 BABAM1Q9NWV8 329 aa12.8□□□□□ -0.36
HDAC7-225ENST00000491464 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
HDAC7-225ENST00000491464 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
HDAC7-225ENST00000491464 MYL6BP14649 208 aa12.79□□□□□ -0.36
HDAC7-225ENST00000491464 GTF2E1P29083 439 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-225ENST00000491464 NEUROD2Q15784 382 aa12.79□□□□□ -0.36
HDAC7-225ENST00000491464 STYK1Q6J9G0 422 aa12.79□□□□□ -0.36
HDAC7-225ENST00000491464 RUNDC1Q96C34 613 aa12.79□□□□□ -0.36
HDAC7-225ENST00000491464 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
HDAC7-225ENST00000491464 NMRK2Q9NPI5 230 aa12.79□□□□□ -0.36
HDAC7-225ENST00000491464 ZNF219Q9P2Y4 722 aaPredicted RBP12.79□□□□□ -0.36
HDAC7-225ENST00000491464 ERBB4Q15303 1308 aa12.79□□□□□ -0.36
HDAC7-225ENST00000491464 NUP98P52948 1817 aa12.78□□□□□ -0.36
HDAC7-225ENST00000491464 TNRC6CQ9HCJ0 1690 aaKnown RBP12.78□□□□□ -0.36
HDAC7-225ENST00000491464 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
HDAC7-225ENST00000491464 ERVV-1B6SEH8 477 aa12.78□□□□□ -0.36
HDAC7-225ENST00000491464 C21orf2O43822 256 aa12.78□□□□□ -0.36
HDAC7-225ENST00000491464 SRGNP10124 158 aa12.78□□□□□ -0.36
HDAC7-225ENST00000491464 SOGA3Q5TF21 947 aa12.78□□□□□ -0.36
HDAC7-225ENST00000491464 PRKRIP1Q9H875 184 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-225ENST00000491464 MAP3K15Q6ZN16 1313 aa12.78□□□□□ -0.36
HDAC7-225ENST00000491464 ARFGEF2Q9Y6D5 1785 aa12.78□□□□□ -0.36
HDAC7-225ENST00000491464 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.36
HDAC7-225ENST00000491464 TOMM70O94826 608 aa12.77□□□□□ -0.37
HDAC7-225ENST00000491464 HSPA6P17066 643 aa12.77□□□□□ -0.37
HDAC7-225ENST00000491464 EIF2S2P20042 333 aaKnown RBP12.77□□□□□ -0.37
HDAC7-225ENST00000491464 HLFQ16534 295 aa12.77□□□□□ -0.37
HDAC7-225ENST00000491464 PRPF40BQ6NWY9 871 aaKnown RBP12.77□□□□□ -0.37
HDAC7-225ENST00000491464 NYXQ9GZU5 481 aa12.77□□□□□ -0.37
HDAC7-225ENST00000491464 SLX4Q8IY92 1834 aa12.76□□□□□ -0.37
HDAC7-225ENST00000491464 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
HDAC7-225ENST00000491464 NFKBIEO00221 500 aa12.76□□□□□ -0.37
HDAC7-225ENST00000491464 NPR1P16066 1061 aa12.76□□□□□ -0.37
HDAC7-225ENST00000491464 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-225ENST00000491464 TTLL7Q6ZT98 887 aa12.76□□□□□ -0.37
HDAC7-225ENST00000491464 ZBTB3Q9H5J0 574 aa12.76□□□□□ -0.37
HDAC7-225ENST00000491464 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
HDAC7-225ENST00000491464 LAS1LQ9Y4W2 734 aaKnown RBP12.76□□□□□ -0.37
HDAC7-225ENST00000491464 CEP350Q5VT06 3117 aa12.75□□□□□ -0.37
HDAC7-225ENST00000491464 TAOK3Q9H2K8 898 aa12.75□□□□□ -0.37
HDAC7-225ENST00000491464 DICER1Q9UPY3 1922 aaKnown RBP12.75□□□□□ -0.37
HDAC7-225ENST00000491464 LTBP3Q9NS15 1303 aa12.74□□□□□ -0.37
HDAC7-225ENST00000491464 GPTP24298 496 aa12.74□□□□□ -0.37
HDAC7-225ENST00000491464 RBM46Q8TBY0 533 aaKnown RBP12.74□□□□□ -0.37
HDAC7-225ENST00000491464 RRAGCQ9HB90 399 aa12.74□□□□□ -0.37
HDAC7-225ENST00000491464 IBTKQ9P2D0 1353 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-225ENST00000491464 KLRG2A4D1S0 409 aaPredicted RBP12.73□□□□□ -0.37
HDAC7-225ENST00000491464 GLTPD2A6NH11 291 aa12.73□□□□□ -0.37
HDAC7-225ENST00000491464 ALDH1B1P30837 517 aa12.73□□□□□ -0.37
HDAC7-225ENST00000491464 ERFEQ4G0M1 354 aa12.73□□□□□ -0.37
HDAC7-225ENST00000491464 CCDC93Q567U6 631 aa12.73□□□□□ -0.37
HDAC7-225ENST00000491464 DPY19L2Q6NUT2 758 aa12.73□□□□□ -0.37
HDAC7-225ENST00000491464 GIGYF2Q6Y7W6 1299 aaKnown RBP12.73□□□□□ -0.37
HDAC7-225ENST00000491464 CHL1O00533 1208 aa12.72□□□□□ -0.37
HDAC7-225ENST00000491464 APLP1P51693 650 aa12.72□□□□□ -0.37
HDAC7-225ENST00000491464 PRELPP51888 382 aa12.72□□□□□ -0.37
HDAC7-225ENST00000491464 PARP10Q53GL7 1025 aa12.72□□□□□ -0.37
HDAC7-225ENST00000491464 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
HDAC7-225ENST00000491464 NUTM1Q86Y26 1132 aa12.72□□□□□ -0.37
HDAC7-225ENST00000491464 NECTIN2Q92692 538 aa12.72□□□□□ -0.37
HDAC7-225ENST00000491464 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
HDAC7-225ENST00000491464 ABCC12Q96J65 1359 aa12.71□□□□□ -0.37
HDAC7-225ENST00000491464 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-225ENST00000491464 CALD1Q05682 793 aaKnown RBP12.71□□□□□ -0.37
HDAC7-225ENST00000491464 FSTL1Q12841 308 aa12.71□□□□□ -0.37
HDAC7-225ENST00000491464 HSP90AB3PQ58FF7 597 aa12.71□□□□□ -0.37
HDAC7-225ENST00000491464 ZNF34Q8IZ26 560 aa12.71□□□□□ -0.37
HDAC7-225ENST00000491464 RPGRQ92834 1020 aaKnown RBP12.71□□□□□ -0.37
HDAC7-225ENST00000491464 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
HDAC7-225ENST00000491464 UBN2Q6ZU65 1347 aa12.7□□□□□ -0.38
HDAC7-225ENST00000491464 ANXA1P04083 346 aa12.7□□□□□ -0.38
HDAC7-225ENST00000491464 AIMP1Q12904 312 aaKnown RBP12.7□□□□□ -0.38
HDAC7-225ENST00000491464 PDIA6Q15084 440 aa12.7□□□□□ -0.38
HDAC7-225ENST00000491464 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
HDAC7-225ENST00000491464 SUSD4Q5VX71 490 aa12.7□□□□□ -0.38
HDAC7-225ENST00000491464 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
HDAC7-225ENST00000491464 DDX21Q9NR30 783 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDAC7-225ENST00000491464 ANKRD36CQ5JPF3 1778 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 NTSR2O95665 410 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 HOXB7P09629 217 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
HDAC7-225ENST00000491464 CRY2Q49AN0 593 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
HDAC7-225ENST00000491464 LRP10Q7Z4F1 713 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms