RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-223ENST00000491295 MASTLQ96GX5 879 aa23.74■■□□□ 1.39
GGA1-223ENST00000491295 NBPF26B4DH59 902 aa23.73■■□□□ 1.39
GGA1-223ENST00000491295 C21orf2O43822 256 aa23.73■■□□□ 1.39
GGA1-223ENST00000491295 VEGFAP15692 232 aaPredicted RBP23.73■■□□□ 1.39
GGA1-223ENST00000491295 PRELPP51888 382 aa23.73■■□□□ 1.39
GGA1-223ENST00000491295 DPY19L2Q6NUT2 758 aa23.73■■□□□ 1.39
GGA1-223ENST00000491295 NBPF10Q6P3W6 841 aaKnown RBP23.73■■□□□ 1.39
GGA1-223ENST00000491295 TPTE2Q6XPS3 522 aa23.73■■□□□ 1.39
GGA1-223ENST00000491295 NBPF5PQ86XG9 351 aaPredicted RBP23.73■■□□□ 1.39
GGA1-223ENST00000491295 NBPF15Q8N660 670 aa23.73■■□□□ 1.39
GGA1-223ENST00000491295 LTBP3Q9NS15 1303 aa23.73■■□□□ 1.39
GGA1-223ENST00000491295 PIP4K2AP48426 406 aaPredicted RBP23.72■■□□□ 1.39
GGA1-223ENST00000491295 NFE2L2Q16236 605 aa23.72■■□□□ 1.39
GGA1-223ENST00000491295 CCDC24Q8N4L8 307 aa23.72■■□□□ 1.39
GGA1-223ENST00000491295 DNAJC5GQ8N7S2 189 aa23.71■■□□□ 1.39
GGA1-223ENST00000491295 SMC1BQ8NDV3 1235 aa23.71■■□□□ 1.39
GGA1-223ENST00000491295 MIS18AQ9NYP9 233 aa23.7■■□□□ 1.38
GGA1-223ENST00000491295 NIP7Q9Y221 180 aaKnown RBP eCLIP23.7■■□□□ 1.38
GGA1-223ENST00000491295 MAPK8IP3Q9UPT6 1336 aa23.69■■□□□ 1.38
GGA1-223ENST00000491295 KLRG2A4D1S0 409 aaPredicted RBP23.69■■□□□ 1.38
GGA1-223ENST00000491295 RALBP1Q15311 655 aa23.69■■□□□ 1.38
GGA1-223ENST00000491295 CCDC88AQ3V6T2 1871 aa23.68■■□□□ 1.38
GGA1-223ENST00000491295 NPR1P16066 1061 aa23.68■■□□□ 1.38
GGA1-223ENST00000491295 ERFEQ4G0M1 354 aa23.68■■□□□ 1.38
GGA1-223ENST00000491295 PRPF40BQ6NWY9 871 aaKnown RBP23.68■■□□□ 1.38
GGA1-223ENST00000491295 TAOK3Q9H2K8 898 aa23.68■■□□□ 1.38
GGA1-223ENST00000491295 FER1L6Q2WGJ9 1857 aa23.68■■□□□ 1.38
GGA1-223ENST00000491295 COL11A2P13942 1736 aaPredicted RBP23.67■■□□□ 1.38
GGA1-223ENST00000491295 DLG5Q8TDM6 1919 aa23.67■■□□□ 1.38
GGA1-223ENST00000491295 ERVV-1B6SEH8 477 aa23.67■■□□□ 1.38
GGA1-223ENST00000491295 EIF4A1P60842 406 aaKnown RBP23.67■■□□□ 1.38
GGA1-223ENST00000491295 ZNF219Q9P2Y4 722 aaPredicted RBP23.66■■□□□ 1.38
GGA1-223ENST00000491295 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
GGA1-223ENST00000491295 C7orf43Q8WVR3 580 aa23.64■■□□□ 1.37
GGA1-223ENST00000491295 NYXQ9GZU5 481 aa23.64■■□□□ 1.37
GGA1-223ENST00000491295 KDM3BQ7LBC6 1761 aa23.64■■□□□ 1.37
GGA1-223ENST00000491295 DICER1Q9UPY3 1922 aaKnown RBP23.64■■□□□ 1.37
GGA1-223ENST00000491295 TIAM2Q8IVF5 1701 aa23.64■■□□□ 1.37
GGA1-223ENST00000491295 SLX4Q8IY92 1834 aa23.63■■□□□ 1.37
GGA1-223ENST00000491295 ARFGEF2Q9Y6D5 1785 aa23.63■■□□□ 1.37
GGA1-223ENST00000491295 GTF2E1P29083 439 aaPredicted RBP23.63■■□□□ 1.37
GGA1-223ENST00000491295 ALDH1B1P30837 517 aa23.63■■□□□ 1.37
GGA1-223ENST00000491295 HLFQ16534 295 aa23.63■■□□□ 1.37
GGA1-223ENST00000491295 IFFO2Q5TF58 517 aa23.63■■□□□ 1.37
GGA1-223ENST00000491295 BABAM1Q9NWV8 329 aa23.63■■□□□ 1.37
GGA1-223ENST00000491295 ERBB4Q15303 1308 aa23.62■■□□□ 1.37
GGA1-223ENST00000491295 WDR90Q96KV7 1748 aa23.62■■□□□ 1.37
GGA1-223ENST00000491295 CCDC93Q567U6 631 aa23.62■■□□□ 1.37
GGA1-223ENST00000491295 KIF6Q6ZMV9 814 aa23.62■■□□□ 1.37
GGA1-223ENST00000491295 MAP3K15Q6ZN16 1313 aa23.61■■□□□ 1.37
GGA1-223ENST00000491295 LMOD3Q0VAK6 560 aa23.6■■□□□ 1.37
GGA1-223ENST00000491295 RTKN2Q8IZC4 609 aa23.6■■□□□ 1.37
GGA1-223ENST00000491295 KLRG1Q96E93 195 aa23.6■■□□□ 1.37
GGA1-223ENST00000491295 THUMPD2Q9BTF0 503 aaKnown RBP23.6■■□□□ 1.37
GGA1-223ENST00000491295 RRP7AQ9Y3A4 280 aaKnown RBP23.6■■□□□ 1.37
GGA1-223ENST00000491295 POTECB2RU33 542 aa23.59■■□□□ 1.37
GGA1-223ENST00000491295 NGEFQ8N5V2 710 aa23.59■■□□□ 1.37
GGA1-223ENST00000491295 RIPK4P57078 832 aa23.58■■□□□ 1.37
GGA1-223ENST00000491295 TSPYL4Q9UJ04 414 aa23.58■■□□□ 1.37
GGA1-223ENST00000491295 FAM177BA6PVY3 158 aa23.57■■□□□ 1.36
GGA1-223ENST00000491295 FKBP4Q02790 459 aaKnown RBP eCLIP23.57■■□□□ 1.36
GGA1-223ENST00000491295 CACNA1SQ13698 1873 aa23.56■■□□□ 1.36
GGA1-223ENST00000491295 IBTKQ9P2D0 1353 aaPredicted RBP23.56■■□□□ 1.36
GGA1-223ENST00000491295 MYL6BP14649 208 aa23.56■■□□□ 1.36
GGA1-223ENST00000491295 CRY2Q49AN0 593 aa23.56■■□□□ 1.36
GGA1-223ENST00000491295 TTLL7Q6ZT98 887 aa23.56■■□□□ 1.36
GGA1-223ENST00000491295 JMYQ8N9B5 988 aa23.56■■□□□ 1.36
GGA1-223ENST00000491295 TMPOP42166 694 aaKnown RBP23.55■■□□□ 1.36
GGA1-223ENST00000491295 CC2D2BQ6DHV5 1058 aa23.55■■□□□ 1.36
GGA1-223ENST00000491295 NUP98P52948 1817 aa23.54■■□□□ 1.36
GGA1-223ENST00000491295 IQCA1LA6NCM1 817 aa23.54■■□□□ 1.36
GGA1-223ENST00000491295 GRIPAP1Q4V328 841 aa23.54■■□□□ 1.36
GGA1-223ENST00000491295 GIGYF2Q6Y7W6 1299 aaKnown RBP23.54■■□□□ 1.36
GGA1-223ENST00000491295 MYBBP1AQ9BQG0 1328 aaKnown RBP23.54■■□□□ 1.36
GGA1-223ENST00000491295 RIC1Q4ADV7 1423 aa23.53■■□□□ 1.36
GGA1-223ENST00000491295 DDNO94850 711 aaPredicted RBP23.53■■□□□ 1.36
GGA1-223ENST00000491295 HTRA3P83110 453 aa23.53■■□□□ 1.36
GGA1-223ENST00000491295 ZNF34Q8IZ26 560 aa23.53■■□□□ 1.36
GGA1-223ENST00000491295 HOXA10P31260 410 aaPredicted RBP23.52■■□□□ 1.36
GGA1-223ENST00000491295 PARP10Q53GL7 1025 aa23.52■■□□□ 1.36
GGA1-223ENST00000491295 PPP1R42Q7Z4L9 355 aa23.52■■□□□ 1.36
GGA1-223ENST00000491295 L3MBTL3Q96JM7 780 aaPredicted RBP23.52■■□□□ 1.36
GGA1-223ENST00000491295 ZBTB3Q9H5J0 574 aa23.52■■□□□ 1.36
GGA1-223ENST00000491295 DDX10Q13206 875 aaKnown RBP23.51■■□□□ 1.35
GGA1-223ENST00000491295 NUTM1Q86Y26 1132 aa23.51■■□□□ 1.35
GGA1-223ENST00000491295 SUSD4Q5VX71 490 aa23.5■■□□□ 1.35
GGA1-223ENST00000491295 RPGRQ92834 1020 aaKnown RBP23.5■■□□□ 1.35
GGA1-223ENST00000491295 PSMD1Q99460 953 aa23.5■■□□□ 1.35
GGA1-223ENST00000491295 GPTP24298 496 aa23.49■■□□□ 1.35
GGA1-223ENST00000491295 PDIA6Q15084 440 aa23.49■■□□□ 1.35
GGA1-223ENST00000491295 CHADLQ6NUI6 762 aa23.49■■□□□ 1.35
GGA1-223ENST00000491295 LRP10Q7Z4F1 713 aa23.49■■□□□ 1.35
GGA1-223ENST00000491295 SYNE4Q8N205 404 aa23.49■■□□□ 1.35
GGA1-223ENST00000491295 CRAMP1Q96RY5 1269 aa23.49■■□□□ 1.35
GGA1-223ENST00000491295 ZNF277Q9NRM2 450 aaPredicted RBP23.49■■□□□ 1.35
GGA1-223ENST00000491295 UBN2Q6ZU65 1347 aa23.49■■□□□ 1.35
GGA1-223ENST00000491295 EIF2S2P20042 333 aaKnown RBP23.48■■□□□ 1.35
GGA1-223ENST00000491295 IARSP41252 1262 aaKnown RBP23.48■■□□□ 1.35
GGA1-223ENST00000491295 RUNDC1Q96C34 613 aa23.48■■□□□ 1.35
GGA1-223ENST00000491295 RBM17Q96I25 401 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms