RNA–Protein interactions for RNA: ENST00000491274.5

SDHB-208, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-208ENST00000491274 LMOD3Q0VAK6 560 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 PNISRQ8TF01 805 aaKnown RBP8.74□□□□□ -1.01
SDHB-208ENST00000491274 RUNDC1Q96C34 613 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 ZNF496Q96IT1 587 aaPredicted RBP8.74□□□□□ -1.01
SDHB-208ENST00000491274 DCBLD2Q96PD2 775 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 FHDC1Q9C0D6 1143 aaPredicted RBP8.74□□□□□ -1.01
SDHB-208ENST00000491274 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 CCDC87Q9NVE4 849 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 MIS18AQ9NYP9 233 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 RRP7AQ9Y3A4 280 aaKnown RBP8.74□□□□□ -1.01
SDHB-208ENST00000491274 ZNF330Q9Y3S2 320 aaPredicted RBP8.74□□□□□ -1.01
SDHB-208ENST00000491274 BTAF1O14981 1849 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 SBF2Q86WG5 1849 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 CNTNAP4Q9C0A0 1308 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 DOT1LQ8TEK3 1739 aa8.74□□□□□ -1.01
SDHB-208ENST00000491274 KCNQ3O43525 872 aa8.73□□□□□ -1.01
SDHB-208ENST00000491274 ZPR1O75312 459 aa8.73□□□□□ -1.01
SDHB-208ENST00000491274 CYP19A1P11511 503 aaPredicted RBP8.73□□□□□ -1.01
SDHB-208ENST00000491274 TMPOP42166 694 aaKnown RBP8.73□□□□□ -1.01
SDHB-208ENST00000491274 PPP1R15BQ5SWA1 713 aa8.73□□□□□ -1.01
SDHB-208ENST00000491274 LHX8Q68G74 356 aa8.73□□□□□ -1.01
SDHB-208ENST00000491274 INTS5Q6P9B9 1019 aaKnown RBP8.73□□□□□ -1.01
SDHB-208ENST00000491274 AMIGO3Q86WK7 504 aa8.73□□□□□ -1.01
SDHB-208ENST00000491274 NLGN1Q8N2Q7 840 aa8.73□□□□□ -1.01
SDHB-208ENST00000491274 THUMPD2Q9BTF0 503 aaKnown RBP8.73□□□□□ -1.01
SDHB-208ENST00000491274 MRS2Q9HD23 443 aa8.73□□□□□ -1.01
SDHB-208ENST00000491274 PKD1L3Q7Z443 1732 aa8.73□□□□□ -1.01
SDHB-208ENST00000491274 NUP188Q5SRE5 1749 aa8.72□□□□□ -1.01
SDHB-208ENST00000491274 GPR37O15354 613 aa8.72□□□□□ -1.01
SDHB-208ENST00000491274 SNRPA1P09661 255 aaKnown RBP8.72□□□□□ -1.01
SDHB-208ENST00000491274 PELP1Q8IZL8 1130 aaKnown RBP8.72□□□□□ -1.01
SDHB-208ENST00000491274 SYT17Q9BSW7 474 aa8.72□□□□□ -1.01
SDHB-208ENST00000491274 TMEM106CQ9BVX2 250 aa8.72□□□□□ -1.01
SDHB-208ENST00000491274 LAS1LQ9Y4W2 734 aaKnown RBP8.72□□□□□ -1.01
SDHB-208ENST00000491274 CEMIPQ8WUJ3 1361 aa8.72□□□□□ -1.01
SDHB-208ENST00000491274 RREB1Q92766 1687 aa8.72□□□□□ -1.01
SDHB-208ENST00000491274 A0A087WZG4 1122 aa8.71□□□□□ -1.02
SDHB-208ENST00000491274 GALR2O43603 387 aaPredicted RBP8.71□□□□□ -1.02
SDHB-208ENST00000491274 MMP10P09238 476 aa8.71□□□□□ -1.02
SDHB-208ENST00000491274 MKRN3Q13064 507 aaKnown RBP8.71□□□□□ -1.02
SDHB-208ENST00000491274 FAM117AQ9C073 453 aa8.71□□□□□ -1.02
SDHB-208ENST00000491274 TSPYL4Q9UJ04 414 aa8.71□□□□□ -1.02
SDHB-208ENST00000491274 HEG1Q9ULI3 1381 aa8.71□□□□□ -1.02
SDHB-208ENST00000491274 SHANK3Q9BYB0 1731 aa8.71□□□□□ -1.02
SDHB-208ENST00000491274 RGPD3A6NKT7 1758 aaPredicted RBP8.71□□□□□ -1.02
SDHB-208ENST00000491274 RGPD4Q7Z3J3 1758 aa8.71□□□□□ -1.02
SDHB-208ENST00000491274 APAF1O14727 1248 aa8.7□□□□□ -1.02
SDHB-208ENST00000491274 A1BGP04217 495 aa8.7□□□□□ -1.02
SDHB-208ENST00000491274 GPR162Q16538 588 aa8.7□□□□□ -1.02
SDHB-208ENST00000491274 PODXL2Q9NZ53 605 aa8.7□□□□□ -1.02
SDHB-208ENST00000491274 SRP68Q9UHB9 627 aaKnown RBP8.7□□□□□ -1.02
SDHB-208ENST00000491274 ZBTB1Q9Y2K1 713 aa8.7□□□□□ -1.02
SDHB-208ENST00000491274 USP16Q9Y5T5 823 aa8.7□□□□□ -1.02
SDHB-208ENST00000491274 PARP3Q9Y6F1 533 aa8.7□□□□□ -1.02
SDHB-208ENST00000491274 GYS1P13807 737 aa8.69□□□□□ -1.02
SDHB-208ENST00000491274 CCDC184Q52MB2 194 aa8.69□□□□□ -1.02
SDHB-208ENST00000491274 USPL1Q5W0Q7 1092 aa8.69□□□□□ -1.02
SDHB-208ENST00000491274 C1orf115Q9H7X2 142 aa8.69□□□□□ -1.02
SDHB-208ENST00000491274 GPHNQ9NQX3 736 aaPredicted RBP8.69□□□□□ -1.02
SDHB-208ENST00000491274 PRAMEF22A3QJZ6 481 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 NPHP1O15259 732 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 CALD1Q05682 793 aaKnown RBP8.68□□□□□ -1.02
SDHB-208ENST00000491274 GOLGA2Q08379 1002 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 BICDL1Q6ZP65 573 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 NGEFQ8N5V2 710 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 NARFQ9UHQ1 456 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 TBC1D2BQ9UPU7 963 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 CD2APQ9Y5K6 639 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 SOS1Q07889 1333 aaPredicted RBP8.68□□□□□ -1.02
SDHB-208ENST00000491274 USP42Q9H9J4 1324 aaKnown RBP8.68□□□□□ -1.02
SDHB-208ENST00000491274 TOGARAM1Q9Y4F4 1720 aa8.68□□□□□ -1.02
SDHB-208ENST00000491274 SENP3-EIF4A1A0A087X0R7 540 aa8.67□□□□□ -1.02
SDHB-208ENST00000491274 GIGYF1O75420 1035 aaPredicted RBP8.67□□□□□ -1.02
SDHB-208ENST00000491274 EIF2S2P20042 333 aaKnown RBP8.67□□□□□ -1.02
SDHB-208ENST00000491274 IL6STP40189 918 aaPredicted RBP8.67□□□□□ -1.02
SDHB-208ENST00000491274 PIP4K2AP48426 406 aaPredicted RBP8.67□□□□□ -1.02
SDHB-208ENST00000491274 EIF5P55010 431 aaKnown RBP8.67□□□□□ -1.02
SDHB-208ENST00000491274 EIF4A1P60842 406 aaKnown RBP8.67□□□□□ -1.02
SDHB-208ENST00000491274 PAPPAQ13219 1627 aa8.67□□□□□ -1.02
SDHB-208ENST00000491274 DSG2Q14126 1118 aa8.67□□□□□ -1.02
SDHB-208ENST00000491274 FAM9BQ8IZU0 186 aa8.67□□□□□ -1.02
SDHB-208ENST00000491274 BABAM1Q9NWV8 329 aa8.67□□□□□ -1.02
SDHB-208ENST00000491274 MRC1P22897 1456 aa8.66□□□□□ -1.02
SDHB-208ENST00000491274 PDIA6Q15084 440 aa8.66□□□□□ -1.02
SDHB-208ENST00000491274 DZIP3Q86Y13 1208 aaKnown RBP8.66□□□□□ -1.02
SDHB-208ENST00000491274 NLGN2Q8NFZ4 835 aa8.66□□□□□ -1.02
SDHB-208ENST00000491274 WWC3Q9ULE0 1092 aa8.66□□□□□ -1.02
SDHB-208ENST00000491274 TRIM35Q9UPQ4 493 aa8.66□□□□□ -1.02
SDHB-208ENST00000491274 SALL2Q9Y467 1007 aaPredicted RBP8.66□□□□□ -1.02
SDHB-208ENST00000491274 C4BP0C0L5 1744 aa8.66□□□□□ -1.02
SDHB-208ENST00000491274 COL15A1P39059 1388 aa8.65□□□□□ -1.02
SDHB-208ENST00000491274 CHL1O00533 1208 aa8.65□□□□□ -1.02
SDHB-208ENST00000491274 MYL6BP14649 208 aa8.65□□□□□ -1.02
SDHB-208ENST00000491274 NECTIN2Q92692 538 aa8.65□□□□□ -1.02
SDHB-208ENST00000491274 MS4A3Q96HJ5 214 aa8.65□□□□□ -1.02
SDHB-208ENST00000491274 SETDB2Q96T68 719 aa8.65□□□□□ -1.02
SDHB-208ENST00000491274 ARID3AQ99856 593 aa8.65□□□□□ -1.02
SDHB-208ENST00000491274 LY75O60449 1722 aa8.65□□□□□ -1.03
SDHB-208ENST00000491274 LRP5O75197 1615 aa8.65□□□□□ -1.03
SDHB-208ENST00000491274 ITGB4P16144 1822 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms