RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	ANTXR1	Q9H6X2	564 aa		7.76	□□□□□ -1.17
FN1-223	ENST00000490833	STAP2	Q9UGK3	403 aa		7.76	□□□□□ -1.17
FN1-223	ENST00000490833	SPG7	Q9UQ90	795 aa		7.76	□□□□□ -1.17
FN1-223	ENST00000490833	CHD2	O14647	1828 aa	Known RBP	7.75	□□□□□ -1.17
FN1-223	ENST00000490833	PHRF1	Q9P1Y6	1649 aa	Known RBP	7.75	□□□□□ -1.17
FN1-223	ENST00000490833	HIP1	O00291	1037 aa		7.75	□□□□□ -1.17
FN1-223	ENST00000490833	SLC4A10	Q6U841	1118 aa		7.75	□□□□□ -1.17
FN1-223	ENST00000490833	CLEC17A	Q6ZS10	378 aa		7.75	□□□□□ -1.17
FN1-223	ENST00000490833	ARHGEF25	Q86VW2	580 aa		7.75	□□□□□ -1.17
FN1-223	ENST00000490833	PROSER2	Q86WR7	435 aa	Predicted RBP	7.75	□□□□□ -1.17
FN1-223	ENST00000490833	SIRT2	Q8IXJ6	389 aa		7.75	□□□□□ -1.17
FN1-223	ENST00000490833	KIF1BP	Q96EK5	621 aa		7.75	□□□□□ -1.17
FN1-223	ENST00000490833	DLG5	Q8TDM6	1919 aa		7.75	□□□□□ -1.17
FN1-223	ENST00000490833	ABCC6	O95255	1503 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	BTBD11	A6QL63	1104 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	ARHGAP33	O14559	1287 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	MCM4	P33991	863 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	ADGRD1	Q6QNK2	874 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	PLPP6	Q8IY26	295 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	IL17RE	Q8NFR9	667 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	SSH3	Q8TE77	659 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	RAPGEF4	Q8WZA2	1011 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	ANP32B	Q92688	251 aa	Known RBP	7.74	□□□□□ -1.17
FN1-223	ENST00000490833	CHMP4C	Q96CF2	233 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	TTC41P	Q6P2S7	1318 aa		7.74	□□□□□ -1.17
FN1-223	ENST00000490833	ATP10D	Q9P241	1426 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	TBC1D12	O60347	775 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	MX1	P20591	662 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	PDE1A	P54750	535 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	EIF4A1	P60842	406 aa	Known RBP	7.73	□□□□□ -1.17
FN1-223	ENST00000490833	NEXN	Q0ZGT2	675 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	MTX1	Q13505	466 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	KRT28	Q7Z3Y7	464 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	SKAP1	Q86WV1	359 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	HS6ST3	Q8IZP7	471 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	DNAAF4	Q8WXU2	420 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	IL17RA	Q96F46	866 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	USP26	Q9BXU7	913 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	NPHP3	Q7Z494	1330 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	PIK3C2A	O00443	1686 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	KIF1A	Q12756	1690 aa		7.73	□□□□□ -1.17
FN1-223	ENST00000490833	FRAT2	O75474	233 aa	Predicted RBP	7.72	□□□□□ -1.17
FN1-223	ENST00000490833	TAT	P17735	454 aa	Predicted RBP	7.72	□□□□□ -1.17
FN1-223	ENST00000490833	SLC4A3	P48751	1232 aa		7.72	□□□□□ -1.17
FN1-223	ENST00000490833	FOXK1	P85037	733 aa		7.72	□□□□□ -1.17
FN1-223	ENST00000490833	PPP4R3B	Q5MIZ7	849 aa		7.72	□□□□□ -1.17
FN1-223	ENST00000490833	ZNF530	Q6P9A1	599 aa	Predicted RBP	7.72	□□□□□ -1.17
FN1-223	ENST00000490833	KIAA1211	Q6ZU35	1233 aa		7.72	□□□□□ -1.17
FN1-223	ENST00000490833	CNTROB	Q8N137	903 aa		7.72	□□□□□ -1.17
FN1-223	ENST00000490833	CLASRP	Q8N2M8	674 aa	Known RBP	7.72	□□□□□ -1.17
FN1-223	ENST00000490833	INTS4	Q96HW7	963 aa	Known RBP	7.72	□□□□□ -1.17
FN1-223	ENST00000490833	MEIS3	Q99687	375 aa		7.72	□□□□□ -1.17
FN1-223	ENST00000490833	SLK	Q9H2G2	1235 aa	Predicted RBP	7.72	□□□□□ -1.17
FN1-223	ENST00000490833	ERBB4	Q15303	1308 aa		7.72	□□□□□ -1.17
FN1-223	ENST00000490833	RGS12	O14924	1447 aa		7.71	□□□□□ -1.17
FN1-223	ENST00000490833	GOLGA6L3	A6NEY3	463 aa		7.71	□□□□□ -1.18
FN1-223	ENST00000490833	RNMT	O43148	476 aa	Known RBP	7.71	□□□□□ -1.18
FN1-223	ENST00000490833	GLRX3	O76003	335 aa	Known RBP	7.71	□□□□□ -1.18
FN1-223	ENST00000490833	SDS	P20132	328 aa		7.71	□□□□□ -1.18
FN1-223	ENST00000490833	MRE11	P49959	708 aa		7.71	□□□□□ -1.18
FN1-223	ENST00000490833	RAB3GAP1	Q15042	981 aa		7.71	□□□□□ -1.18
FN1-223	ENST00000490833	LARP1	Q6PKG0	1096 aa	Known RBP	7.71	□□□□□ -1.18
FN1-223	ENST00000490833	KSR2	Q6VAB6	950 aa		7.71	□□□□□ -1.18
FN1-223	ENST00000490833	LINS1	Q8NG48	757 aa		7.71	□□□□□ -1.18
FN1-223	ENST00000490833	PTCD2	Q8WV60	388 aa	Known RBP	7.71	□□□□□ -1.18
FN1-223	ENST00000490833	GPHN	Q9NQX3	736 aa	Predicted RBP	7.71	□□□□□ -1.18
FN1-223	ENST00000490833	C9orf78	Q9NZ63	289 aa	Predicted RBP	7.71	□□□□□ -1.18
FN1-223	ENST00000490833	ATP6V1D	Q9Y5K8	247 aa		7.71	□□□□□ -1.18
FN1-223	ENST00000490833	PEAK1	Q9H792	1746 aa		7.71	□□□□□ -1.18
FN1-223	ENST00000490833	ADAMTSL3	P82987	1691 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	SLIT3	O75094	1523 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	DDIT3	P35638	169 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	PSEN2	P49810	448 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	DSG2	Q14126	1118 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	NBPF6	Q5VWK0	638 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	IFNL2	Q8IZJ0	200 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	ANKRD24	Q8TF21	1146 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	FBXO41	Q8TF61	875 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	DCAF5	Q96JK2	942 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	NBPF4	Q96M43	638 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	USP44	Q9H0E7	712 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	C1orf115	Q9H7X2	142 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	DDX21	Q9NR30	783 aa	Known RBP eCLIP	7.7	□□□□□ -1.18
FN1-223	ENST00000490833	NWD1	Q149M9	1564 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	LRRC37A3	O60309	1634 aa		7.7	□□□□□ -1.18
FN1-223	ENST00000490833	NFAT5	O94916	1531 aa		7.69	□□□□□ -1.18
FN1-223	ENST00000490833	FOXO3	O43524	673 aa		7.69	□□□□□ -1.18
FN1-223	ENST00000490833	TRAK2	O60296	914 aa		7.69	□□□□□ -1.18
FN1-223	ENST00000490833	GIGYF1	O75420	1035 aa	Predicted RBP	7.69	□□□□□ -1.18
FN1-223	ENST00000490833	CSPP1	Q1MSJ5	1256 aa		7.69	□□□□□ -1.18
FN1-223	ENST00000490833	LRRFIP1	Q32MZ4	808 aa	Known RBP	7.69	□□□□□ -1.18
FN1-223	ENST00000490833	DMRTA1	Q5VZB9	504 aa		7.69	□□□□□ -1.18
FN1-223	ENST00000490833	TTC5	Q8N0Z6	440 aa		7.69	□□□□□ -1.18
FN1-223	ENST00000490833	LTV1	Q96GA3	475 aa	Predicted RBP	7.69	□□□□□ -1.18
FN1-223	ENST00000490833	USP42	Q9H9J4	1324 aa	Known RBP	7.69	□□□□□ -1.18
FN1-223	ENST00000490833	HEG1	Q9ULI3	1381 aa		7.69	□□□□□ -1.18
FN1-223	ENST00000490833	TRIM6-TRIM34	B2RNG4	842 aa		7.68	□□□□□ -1.18
FN1-223	ENST00000490833	SRGAP3	O43295	1099 aa		7.68	□□□□□ -1.18
FN1-223	ENST00000490833	SURF6	O75683	361 aa	Known RBP	7.68	□□□□□ -1.18
FN1-223	ENST00000490833	SNRPA1	P09661	255 aa	Known RBP	7.68	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 80 ms