RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 STYK1Q6J9G0 422 aa26.03■■□□□ 1.76
SREBF1-216ENST00000490796 NBPF10Q6P3W6 841 aaKnown RBP26.03■■□□□ 1.76
SREBF1-216ENST00000490796 TPTE2Q6XPS3 522 aa26.03■■□□□ 1.76
SREBF1-216ENST00000490796 NBPF15Q8N660 670 aa26.03■■□□□ 1.76
SREBF1-216ENST00000490796 MASTLQ96GX5 879 aa26.03■■□□□ 1.76
SREBF1-216ENST00000490796 PLEKHF1Q96S99 279 aa26.03■■□□□ 1.76
SREBF1-216ENST00000490796 FSTL1Q12841 308 aa26.02■■□□□ 1.76
SREBF1-216ENST00000490796 ANKRD31Q8N7Z5 1873 aa26.02■■□□□ 1.76
SREBF1-216ENST00000490796 GLTPD2A6NH11 291 aa26.01■■□□□ 1.75
SREBF1-216ENST00000490796 RGL2O15211 777 aa26.01■■□□□ 1.75
SREBF1-216ENST00000490796 GTF2E1P29083 439 aaPredicted RBP26.01■■□□□ 1.75
SREBF1-216ENST00000490796 RALBP1Q15311 655 aa26.01■■□□□ 1.75
SREBF1-216ENST00000490796 SOGA3Q5TF21 947 aa26.01■■□□□ 1.75
SREBF1-216ENST00000490796 BCORQ6W2J9 1755 aa26.01■■□□□ 1.75
SREBF1-216ENST00000490796 NGEFQ8N5V2 710 aa26.01■■□□□ 1.75
SREBF1-216ENST00000490796 FAM177BA6PVY3 158 aa26■■□□□ 1.75
SREBF1-216ENST00000490796 SRGNP10124 158 aa26■■□□□ 1.75
SREBF1-216ENST00000490796 DPY19L2Q6NUT2 758 aa26■■□□□ 1.75
SREBF1-216ENST00000490796 PRELPP51888 382 aa25.99■■□□□ 1.75
SREBF1-216ENST00000490796 PRPF40BQ6NWY9 871 aaKnown RBP25.99■■□□□ 1.75
SREBF1-216ENST00000490796 THUMPD2Q9BTF0 503 aaKnown RBP25.99■■□□□ 1.75
SREBF1-216ENST00000490796 TAOK3Q9H2K8 898 aa25.99■■□□□ 1.75
SREBF1-216ENST00000490796 VEGFAP15692 232 aaPredicted RBP25.98■■□□□ 1.75
SREBF1-216ENST00000490796 ERFEQ4G0M1 354 aa25.98■■□□□ 1.75
SREBF1-216ENST00000490796 RRP7AQ9Y3A4 280 aaKnown RBP25.98■■□□□ 1.75
SREBF1-216ENST00000490796 TNRC6CQ9HCJ0 1690 aaKnown RBP25.97■■□□□ 1.75
SREBF1-216ENST00000490796 EIF4A1P60842 406 aaKnown RBP25.97■■□□□ 1.75
SREBF1-216ENST00000490796 KIF6Q6ZMV9 814 aa25.97■■□□□ 1.75
SREBF1-216ENST00000490796 SMC1BQ8NDV3 1235 aa25.97■■□□□ 1.75
SREBF1-216ENST00000490796 DLG5Q8TDM6 1919 aa25.96■■□□□ 1.75
SREBF1-216ENST00000490796 NPR1P16066 1061 aa25.96■■□□□ 1.75
SREBF1-216ENST00000490796 COL11A2P13942 1736 aaPredicted RBP25.96■■□□□ 1.75
SREBF1-216ENST00000490796 HLFQ16534 295 aa25.95■■□□□ 1.74
SREBF1-216ENST00000490796 CCDC88AQ3V6T2 1871 aa25.94■■□□□ 1.74
SREBF1-216ENST00000490796 MYL6BP14649 208 aa25.94■■□□□ 1.74
SREBF1-216ENST00000490796 RIPK4P57078 832 aa25.94■■□□□ 1.74
SREBF1-216ENST00000490796 DDX10Q13206 875 aaKnown RBP25.94■■□□□ 1.74
SREBF1-216ENST00000490796 TSPYL4Q9UJ04 414 aa25.94■■□□□ 1.74
SREBF1-216ENST00000490796 LTBP3Q9NS15 1303 aa25.93■■□□□ 1.74
SREBF1-216ENST00000490796 NYXQ9GZU5 481 aa25.93■■□□□ 1.74
SREBF1-216ENST00000490796 ERVV-1B6SEH8 477 aa25.92■■□□□ 1.74
SREBF1-216ENST00000490796 LMOD3Q0VAK6 560 aa25.92■■□□□ 1.74
SREBF1-216ENST00000490796 CCDC93Q567U6 631 aa25.92■■□□□ 1.74
SREBF1-216ENST00000490796 LAMB4A4D0S4 1761 aa25.92■■□□□ 1.74
SREBF1-216ENST00000490796 MAP3K15Q6ZN16 1313 aa25.91■■□□□ 1.74
SREBF1-216ENST00000490796 KDM3BQ7LBC6 1761 aa25.91■■□□□ 1.74
SREBF1-216ENST00000490796 TIAM2Q8IVF5 1701 aa25.91■■□□□ 1.74
SREBF1-216ENST00000490796 SLX4Q8IY92 1834 aa25.91■■□□□ 1.74
SREBF1-216ENST00000490796 ALDH1B1P30837 517 aa25.9■■□□□ 1.74
SREBF1-216ENST00000490796 KLRG2A4D1S0 409 aaPredicted RBP25.89■■□□□ 1.74
SREBF1-216ENST00000490796 TTLL7Q6ZT98 887 aa25.89■■□□□ 1.74
SREBF1-216ENST00000490796 FER1L6Q2WGJ9 1857 aa25.89■■□□□ 1.73
SREBF1-216ENST00000490796 MYBBP1AQ9BQG0 1328 aaKnown RBP25.88■■□□□ 1.73
SREBF1-216ENST00000490796 CACNA1SQ13698 1873 aa25.88■■□□□ 1.73
SREBF1-216ENST00000490796 ZBTB3Q9H5J0 574 aa25.88■■□□□ 1.73
SREBF1-216ENST00000490796 ERBB4Q15303 1308 aa25.88■■□□□ 1.73
SREBF1-216ENST00000490796 EIF2S2P20042 333 aaKnown RBP25.87■■□□□ 1.73
SREBF1-216ENST00000490796 GPTP24298 496 aa25.87■■□□□ 1.73
SREBF1-216ENST00000490796 DNAJC5GQ8N7S2 189 aa25.87■■□□□ 1.73
SREBF1-216ENST00000490796 TMPOP42166 694 aaKnown RBP25.86■■□□□ 1.73
SREBF1-216ENST00000490796 HTRA3P83110 453 aa25.86■■□□□ 1.73
SREBF1-216ENST00000490796 WDR43Q15061 677 aaKnown RBP eCLIP25.86■■□□□ 1.73
SREBF1-216ENST00000490796 RTKN2Q8IZC4 609 aa25.86■■□□□ 1.73
SREBF1-216ENST00000490796 NEUROD2Q15784 382 aa25.85■■□□□ 1.73
SREBF1-216ENST00000490796 NUTM1Q86Y26 1132 aa25.85■■□□□ 1.73
SREBF1-216ENST00000490796 C7orf43Q8WVR3 580 aa25.85■■□□□ 1.73
SREBF1-216ENST00000490796 BABAM1Q9NWV8 329 aa25.85■■□□□ 1.73
SREBF1-216ENST00000490796 FKBP4Q02790 459 aaKnown RBP eCLIP25.84■■□□□ 1.73
SREBF1-216ENST00000490796 RPGRQ92834 1020 aaKnown RBP25.84■■□□□ 1.73
SREBF1-216ENST00000490796 WDR90Q96KV7 1748 aa25.84■■□□□ 1.73
SREBF1-216ENST00000490796 DICER1Q9UPY3 1922 aaKnown RBP25.84■■□□□ 1.73
SREBF1-216ENST00000490796 ARFGEF2Q9Y6D5 1785 aa25.84■■□□□ 1.73
SREBF1-216ENST00000490796 CCDC146Q8IYE0 955 aa25.83■■□□□ 1.73
SREBF1-216ENST00000490796 KLRG1Q96E93 195 aa25.83■■□□□ 1.73
SREBF1-216ENST00000490796 DDNO94850 711 aaPredicted RBP25.82■■□□□ 1.72
SREBF1-216ENST00000490796 GIGYF2Q6Y7W6 1299 aaKnown RBP25.81■■□□□ 1.72
SREBF1-216ENST00000490796 PPP1R42Q7Z4L9 355 aa25.81■■□□□ 1.72
SREBF1-216ENST00000490796 ZNF277Q9NRM2 450 aaPredicted RBP25.81■■□□□ 1.72
SREBF1-216ENST00000490796 NUP98P52948 1817 aa25.8■■□□□ 1.72
SREBF1-216ENST00000490796 POTECB2RU33 542 aa25.8■■□□□ 1.72
SREBF1-216ENST00000490796 LAS1LQ9Y4W2 734 aaKnown RBP25.8■■□□□ 1.72
SREBF1-216ENST00000490796 ABCC12Q96J65 1359 aa25.8■■□□□ 1.72
SREBF1-216ENST00000490796 IQCA1LA6NCM1 817 aa25.79■■□□□ 1.72
SREBF1-216ENST00000490796 CRY2Q49AN0 593 aa25.79■■□□□ 1.72
SREBF1-216ENST00000490796 PARP10Q53GL7 1025 aa25.79■■□□□ 1.72
SREBF1-216ENST00000490796 IFFO2Q5TF58 517 aa25.79■■□□□ 1.72
SREBF1-216ENST00000490796 SUSD4Q5VX71 490 aa25.79■■□□□ 1.72
SREBF1-216ENST00000490796 OLFM4Q6UX06 510 aa25.79■■□□□ 1.72
SREBF1-216ENST00000490796 RUNDC1Q96C34 613 aa25.79■■□□□ 1.72
SREBF1-216ENST00000490796 IBTKQ9P2D0 1353 aaPredicted RBP25.79■■□□□ 1.72
SREBF1-216ENST00000490796 ZNF34Q8IZ26 560 aa25.78■■□□□ 1.72
SREBF1-216ENST00000490796 NECTIN2Q92692 538 aa25.78■■□□□ 1.72
SREBF1-216ENST00000490796 RBM17Q96I25 401 aaKnown RBP25.78■■□□□ 1.72
SREBF1-216ENST00000490796 UBN2Q6ZU65 1347 aa25.78■■□□□ 1.72
SREBF1-216ENST00000490796 CC2D2BQ6DHV5 1058 aa25.77■■□□□ 1.72
SREBF1-216ENST00000490796 SYNE4Q8N205 404 aa25.77■■□□□ 1.72
SREBF1-216ENST00000490796 TMX4Q9H1E5 349 aaPredicted RBP25.77■■□□□ 1.72
SREBF1-216ENST00000490796 IARSP41252 1262 aaKnown RBP25.76■■□□□ 1.71
SREBF1-216ENST00000490796 ANXA1P04083 346 aa25.75■■□□□ 1.71
SREBF1-216ENST00000490796 AIMP1Q12904 312 aaKnown RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms