RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 ZNF428Q96B54 188 aa10.66□□□□□ -0.7
SF1-218ENST00000489544 MTFR1LQ9H019 292 aa10.66□□□□□ -0.7
SF1-218ENST00000489544 A0A087WZG4 1122 aa10.65□□□□□ -0.7
SF1-218ENST00000489544 PTGER2P43116 358 aa10.65□□□□□ -0.7
SF1-218ENST00000489544 TBC1D9BQ66K14 1250 aa10.65□□□□□ -0.7
SF1-218ENST00000489544 SLC16A10Q8TF71 515 aa10.65□□□□□ -0.7
SF1-218ENST00000489544 SSH1Q8WYL5 1049 aa10.65□□□□□ -0.7
SF1-218ENST00000489544 STK31Q9BXU1 1019 aa10.65□□□□□ -0.7
SF1-218ENST00000489544 MAP3K15Q6ZN16 1313 aa10.64□□□□□ -0.71
SF1-218ENST00000489544 MMP10P09238 476 aa10.64□□□□□ -0.71
SF1-218ENST00000489544 DDR1Q08345 913 aa10.64□□□□□ -0.71
SF1-218ENST00000489544 NFIXQ14938 502 aa10.64□□□□□ -0.71
SF1-218ENST00000489544 KIF6Q6ZMV9 814 aa10.64□□□□□ -0.71
SF1-218ENST00000489544 SGIP1Q9BQI5 828 aa10.64□□□□□ -0.71
SF1-218ENST00000489544 SPON1Q9HCB6 807 aa10.64□□□□□ -0.71
SF1-218ENST00000489544 HYPKQ9NX55 129 aa10.64□□□□□ -0.71
SF1-218ENST00000489544 GPTP24298 496 aa10.63□□□□□ -0.71
SF1-218ENST00000489544 NLGN1Q8N2Q7 840 aa10.63□□□□□ -0.71
SF1-218ENST00000489544 MRPL50Q8N5N7 158 aaKnown RBP10.63□□□□□ -0.71
SF1-218ENST00000489544 FAM177BA6PVY3 158 aa10.62□□□□□ -0.71
SF1-218ENST00000489544 TM4SF1P30408 202 aa10.62□□□□□ -0.71
SF1-218ENST00000489544 RARSP54136 660 aaKnown RBP10.62□□□□□ -0.71
SF1-218ENST00000489544 FLIIQ13045 1269 aa10.62□□□□□ -0.71
SF1-218ENST00000489544 ANKRD13DQ6ZTN6 518 aa10.62□□□□□ -0.71
SF1-218ENST00000489544 CCDC24Q8N4L8 307 aa10.62□□□□□ -0.71
SF1-218ENST00000489544 SMC4Q9NTJ3 1288 aa10.62□□□□□ -0.71
SF1-218ENST00000489544 LRP5O75197 1615 aa10.62□□□□□ -0.71
SF1-218ENST00000489544 SCN7AQ01118 1682 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 PI4KAP2A4QPH2 592 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 F6X3S4 739 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 POLRMTO00411 1230 aaKnown RBP10.61□□□□□ -0.71
SF1-218ENST00000489544 BCAR3O75815 825 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 POLD1P28340 1107 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 RIC3Q7Z5B4 369 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 PI4KAP1Q8N8J0 262 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 PLBD2Q8NHP8 589 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 NIP7Q9Y221 180 aaKnown RBP eCLIP10.61□□□□□ -0.71
SF1-218ENST00000489544 ADCY9O60503 1353 aa10.61□□□□□ -0.71
SF1-218ENST00000489544 UBN2Q6ZU65 1347 aa10.6□□□□□ -0.71
SF1-218ENST00000489544 BCORQ6W2J9 1755 aa10.6□□□□□ -0.71
SF1-218ENST00000489544 FKBP5Q13451 457 aaPredicted RBP10.6□□□□□ -0.71
SF1-218ENST00000489544 GIGYF2Q6Y7W6 1299 aaKnown RBP10.6□□□□□ -0.71
SF1-218ENST00000489544 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
SF1-218ENST00000489544 KLHL34Q8N239 644 aa10.6□□□□□ -0.71
SF1-218ENST00000489544 CHMP4AQ9BY43 222 aa10.6□□□□□ -0.71
SF1-218ENST00000489544 PPP1R1BQ9UD71 204 aaPredicted RBP10.6□□□□□ -0.71
SF1-218ENST00000489544 ZNF652Q9Y2D9 606 aa10.6□□□□□ -0.71
SF1-218ENST00000489544 MAP3K2Q9Y2U5 619 aa10.6□□□□□ -0.71
SF1-218ENST00000489544 SERPINB2P05120 415 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 CT47B1P0C2W7 299 aaPredicted RBP10.59□□□□□ -0.71
SF1-218ENST00000489544 TCIRG1Q13488 830 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 ALDH1L2Q3SY69 923 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 CLEC4GQ6UXB4 293 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 KSR2Q6VAB6 950 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 MYD88Q99836 296 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 NOB1Q9ULX3 412 aaKnown RBP10.59□□□□□ -0.71
SF1-218ENST00000489544 TNNQ9UQP3 1299 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 PARP3Q9Y6F1 533 aa10.59□□□□□ -0.71
SF1-218ENST00000489544 CARMIL3Q8ND23 1372 aa10.58□□□□□ -0.72
SF1-218ENST00000489544 SUSD4Q5VX71 490 aa10.58□□□□□ -0.72
SF1-218ENST00000489544 NUTM1Q86Y26 1132 aa10.58□□□□□ -0.72
SF1-218ENST00000489544 SYNE4Q8N205 404 aa10.58□□□□□ -0.72
SF1-218ENST00000489544 JARID2Q92833 1246 aaPredicted RBP10.58□□□□□ -0.72
SF1-218ENST00000489544 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
SF1-218ENST00000489544 NUP98P52948 1817 aa10.57□□□□□ -0.72
SF1-218ENST00000489544 DDX58O95786 925 aaKnown RBP10.57□□□□□ -0.72
SF1-218ENST00000489544 IGKV5-2P06315 115 aa10.57□□□□□ -0.72
SF1-218ENST00000489544 CWF19L2Q2TBE0 894 aaKnown RBP10.57□□□□□ -0.72
SF1-218ENST00000489544 RTL5Q5HYW3 569 aaPredicted RBP10.57□□□□□ -0.72
SF1-218ENST00000489544 PRR5LQ6MZQ0 368 aa10.57□□□□□ -0.72
SF1-218ENST00000489544 SLC4A10Q6U841 1118 aa10.57□□□□□ -0.72
SF1-218ENST00000489544 NLRP10Q86W26 655 aa10.57□□□□□ -0.72
SF1-218ENST00000489544 DNAAF4Q8WXU2 420 aa10.57□□□□□ -0.72
SF1-218ENST00000489544 FRAT1Q92837 279 aaPredicted RBP10.57□□□□□ -0.72
SF1-218ENST00000489544 ISCA1Q9BUE6 129 aa10.57□□□□□ -0.72
SF1-218ENST00000489544 METTL22Q9BUU2 404 aaPredicted RBP10.57□□□□□ -0.72
SF1-218ENST00000489544 FHDC1Q9C0D6 1143 aaPredicted RBP10.57□□□□□ -0.72
SF1-218ENST00000489544 COL24A1Q17RW2 1714 aa10.57□□□□□ -0.72
SF1-218ENST00000489544 HSP90AB3PQ58FF7 597 aa10.56□□□□□ -0.72
SF1-218ENST00000489544 NBPF5PQ86XG9 351 aaPredicted RBP10.56□□□□□ -0.72
SF1-218ENST00000489544 NLGN2Q8NFZ4 835 aa10.56□□□□□ -0.72
SF1-218ENST00000489544 WWC3Q9ULE0 1092 aa10.56□□□□□ -0.72
SF1-218ENST00000489544 ARFGEF2Q9Y6D5 1785 aa10.56□□□□□ -0.72
SF1-218ENST00000489544 ABCC12Q96J65 1359 aa10.55□□□□□ -0.72
SF1-218ENST00000489544 RGL2O15211 777 aa10.55□□□□□ -0.72
SF1-218ENST00000489544 NPHP1O15259 732 aa10.55□□□□□ -0.72
SF1-218ENST00000489544 NTSR2O95665 410 aa10.55□□□□□ -0.72
SF1-218ENST00000489544 ERFEQ4G0M1 354 aa10.55□□□□□ -0.72
SF1-218ENST00000489544 CNBD1Q8NA66 436 aa10.55□□□□□ -0.72
SF1-218ENST00000489544 RCAN3Q9UKA8 241 aa10.55□□□□□ -0.72
SF1-218ENST00000489544 AFDNP55196 1824 aaKnown RBP10.54□□□□□ -0.72
SF1-218ENST00000489544 NEURL1BA8MQ27 555 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 PLIN1O60240 522 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 CHRNA5P30532 468 aa10.54□□□□□ -0.72
SF1-218ENST00000489544 BRPF1P55201 1214 aaPredicted RBP10.54□□□□□ -0.72
SF1-218ENST00000489544 BEND3Q5T5X7 828 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms