RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 NBPF15Q8N660 670 aa22.73■■□□□ 1.23
COL16A1-215ENST00000488897 CAMKK2Q96RR4 588 aa22.73■■□□□ 1.23
COL16A1-215ENST00000488897 ZBTB1Q9Y2K1 713 aa22.73■■□□□ 1.23
COL16A1-215ENST00000488897 CYP19A1P11511 503 aaPredicted RBP22.72■■□□□ 1.23
COL16A1-215ENST00000488897 AIMP1Q12904 312 aaKnown RBP22.72■■□□□ 1.23
COL16A1-215ENST00000488897 SMARCC1Q92922 1105 aaPredicted RBP22.72■■□□□ 1.23
COL16A1-215ENST00000488897 PHF14O94880 888 aa22.72■■□□□ 1.23
COL16A1-215ENST00000488897 UBR2Q8IWV8 1755 aa22.72■■□□□ 1.23
COL16A1-215ENST00000488897 CRKLP46109 303 aaKnown RBP22.71■■□□□ 1.23
COL16A1-215ENST00000488897 CHD1LQ86WJ1 897 aa22.71■■□□□ 1.23
COL16A1-215ENST00000488897 CHMP5Q9NZZ3 219 aa22.71■■□□□ 1.23
COL16A1-215ENST00000488897 UTRNP46939 3433 aa22.71■■□□□ 1.23
COL16A1-215ENST00000488897 SLC4A2P04920 1241 aa22.71■■□□□ 1.23
COL16A1-215ENST00000488897 PDIA6Q15084 440 aa22.7■■□□□ 1.22
COL16A1-215ENST00000488897 BABAM1Q9NWV8 329 aa22.7■■□□□ 1.22
COL16A1-215ENST00000488897 L1TD1Q5T7N2 865 aaKnown RBP22.7■■□□□ 1.22
COL16A1-215ENST00000488897 PLSCR1O15162 318 aa22.69■■□□□ 1.22
COL16A1-215ENST00000488897 INTS5Q6P9B9 1019 aaKnown RBP22.69■■□□□ 1.22
COL16A1-215ENST00000488897 HSCBQ8IWL3 235 aa22.69■■□□□ 1.22
COL16A1-215ENST00000488897 GCC1Q96CN9 775 aa22.69■■□□□ 1.22
COL16A1-215ENST00000488897 ANO8Q9HCE9 1232 aaPredicted RBP22.69■■□□□ 1.22
COL16A1-215ENST00000488897 ZNF827Q17R98 1081 aa22.69■■□□□ 1.22
COL16A1-215ENST00000488897 MRPL50Q8N5N7 158 aaKnown RBP22.69■■□□□ 1.22
COL16A1-215ENST00000488897 PDGFDQ9GZP0 370 aaPredicted RBP22.69■■□□□ 1.22
COL16A1-215ENST00000488897 MYH14Q7Z406 1995 aaKnown RBP22.69■■□□□ 1.22
COL16A1-215ENST00000488897 ZBTB7BO15156 539 aaPredicted RBP22.68■■□□□ 1.22
COL16A1-215ENST00000488897 RBM25P49756 843 aaKnown RBP22.68■■□□□ 1.22
COL16A1-215ENST00000488897 LNPKQ9C0E8 428 aa22.68■■□□□ 1.22
COL16A1-215ENST00000488897 MCM4P33991 863 aa22.67■■□□□ 1.22
COL16A1-215ENST00000488897 BAG6P46379 1132 aa22.67■■□□□ 1.22
COL16A1-215ENST00000488897 GNPATO15228 680 aa22.67■■□□□ 1.22
COL16A1-215ENST00000488897 SPRYD3Q8NCJ5 442 aa22.67■■□□□ 1.22
COL16A1-215ENST00000488897 BMP2KLQ5H9B9 411 aa22.66■■□□□ 1.22
COL16A1-215ENST00000488897 TJP1Q07157 1748 aa22.66■■□□□ 1.22
COL16A1-215ENST00000488897 TBC1D2BQ9UPU7 963 aa22.66■■□□□ 1.22
COL16A1-215ENST00000488897 TTLL7Q6ZT98 887 aa22.65■■□□□ 1.22
COL16A1-215ENST00000488897 LY75O60449 1722 aa22.65■■□□□ 1.22
COL16A1-215ENST00000488897 STARD3NLO95772 234 aa22.65■■□□□ 1.22
COL16A1-215ENST00000488897 SNX21Q969T3 373 aa22.65■■□□□ 1.22
COL16A1-215ENST00000488897 VSIG10Q8N0Z9 540 aa22.64■■□□□ 1.21
COL16A1-215ENST00000488897 F6X3S4 739 aa22.63■■□□□ 1.21
COL16A1-215ENST00000488897 CCDC30Q5VVM6 783 aa22.63■■□□□ 1.21
COL16A1-215ENST00000488897 ANKRD45Q5TZF3 282 aa22.62■■□□□ 1.21
COL16A1-215ENST00000488897 COPS6Q7L5N1 327 aa22.62■■□□□ 1.21
COL16A1-215ENST00000488897 CCDC87Q9NVE4 849 aa22.62■■□□□ 1.21
COL16A1-215ENST00000488897 LRP10Q7Z4F1 713 aa22.61■■□□□ 1.21
COL16A1-215ENST00000488897 FAM43AQ8N2R8 423 aa22.61■■□□□ 1.21
COL16A1-215ENST00000488897 XAGE3Q8WTP9 111 aa22.61■■□□□ 1.21
COL16A1-215ENST00000488897 ABCC4O15439 1325 aa22.61■■□□□ 1.21
COL16A1-215ENST00000488897 ZBTB3Q9H5J0 574 aa22.61■■□□□ 1.21
COL16A1-215ENST00000488897 SRP68Q9UHB9 627 aaKnown RBP22.61■■□□□ 1.21
COL16A1-215ENST00000488897 STK31Q9BXU1 1019 aa22.6■■□□□ 1.21
COL16A1-215ENST00000488897 TFCP2L1Q9NZI6 479 aa22.6■■□□□ 1.21
COL16A1-215ENST00000488897 AK7Q96M32 723 aa22.6■■□□□ 1.21
COL16A1-215ENST00000488897 API5Q9BZZ5 524 aaKnown RBP22.6■■□□□ 1.21
COL16A1-215ENST00000488897 DBF4Q9UBU7 674 aaPredicted RBP22.59■■□□□ 1.21
COL16A1-215ENST00000488897 PSDA5PKW4 1024 aaPredicted RBP22.59■■□□□ 1.21
COL16A1-215ENST00000488897 SLC27A3Q5K4L6 730 aa22.59■■□□□ 1.21
COL16A1-215ENST00000488897 TAF1LQ8IZX4 1826 aa22.59■■□□□ 1.21
COL16A1-215ENST00000488897 DDX21Q9NR30 783 aaKnown RBP eCLIP22.58■■□□□ 1.21
COL16A1-215ENST00000488897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.57■■□□□ 1.2
COL16A1-215ENST00000488897 ARHGEF1Q92888 912 aaKnown RBP22.57■■□□□ 1.2
COL16A1-215ENST00000488897 FLIIQ13045 1269 aa22.57■■□□□ 1.2
COL16A1-215ENST00000488897 FKBP5Q13451 457 aaPredicted RBP22.57■■□□□ 1.2
COL16A1-215ENST00000488897 HLFQ16534 295 aa22.57■■□□□ 1.2
COL16A1-215ENST00000488897 TEX13AQ9BXU3 409 aaPredicted RBP22.57■■□□□ 1.2
COL16A1-215ENST00000488897 DDX11L8A8MPP1 907 aa22.56■■□□□ 1.2
COL16A1-215ENST00000488897 C1orf115Q9H7X2 142 aa22.56■■□□□ 1.2
COL16A1-215ENST00000488897 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
COL16A1-215ENST00000488897 HOXB7P09629 217 aa22.56■■□□□ 1.2
COL16A1-215ENST00000488897 SLC4A10Q6U841 1118 aa22.56■■□□□ 1.2
COL16A1-215ENST00000488897 AKT1S1Q96B36 256 aa22.56■■□□□ 1.2
COL16A1-215ENST00000488897 COL5A3P25940 1745 aaPredicted RBP22.55■■□□□ 1.2
COL16A1-215ENST00000488897 PI4KAP2A4QPH2 592 aa22.55■■□□□ 1.2
COL16A1-215ENST00000488897 GOLGA6L3A6NEY3 463 aa22.55■■□□□ 1.2
COL16A1-215ENST00000488897 DDIT3P35638 169 aa22.55■■□□□ 1.2
COL16A1-215ENST00000488897 PI4KAP1Q8N8J0 262 aa22.55■■□□□ 1.2
COL16A1-215ENST00000488897 CIZ1Q9ULV3 898 aaPredicted RBP22.55■■□□□ 1.2
COL16A1-215ENST00000488897 TRAK2O60296 914 aa22.55■■□□□ 1.2
COL16A1-215ENST00000488897 EIF5BO60841 1220 aaKnown RBP22.55■■□□□ 1.2
COL16A1-215ENST00000488897 EIF5P55010 431 aaKnown RBP22.55■■□□□ 1.2
COL16A1-215ENST00000488897 CCDC125Q86Z20 511 aa22.55■■□□□ 1.2
COL16A1-215ENST00000488897 JARID2Q92833 1246 aaPredicted RBP22.55■■□□□ 1.2
COL16A1-215ENST00000488897 RTCBQ9Y3I0 505 aaKnown RBP22.55■■□□□ 1.2
COL16A1-215ENST00000488897 R3HDM1Q15032 1099 aaKnown RBP22.54■■□□□ 1.2
COL16A1-215ENST00000488897 SIRT2Q8IXJ6 389 aa22.54■■□□□ 1.2
COL16A1-215ENST00000488897 FSD2A1L4K1 749 aa22.53■■□□□ 1.2
COL16A1-215ENST00000488897 FAM177BA6PVY3 158 aa22.53■■□□□ 1.2
COL16A1-215ENST00000488897 MSL1Q68DK7 614 aa22.53■■□□□ 1.2
COL16A1-215ENST00000488897 BICDL1Q6ZP65 573 aa22.53■■□□□ 1.2
COL16A1-215ENST00000488897 DZIP3Q86Y13 1208 aaKnown RBP22.53■■□□□ 1.2
COL16A1-215ENST00000488897 COL23A1Q86Y22 540 aaPredicted RBP22.53■■□□□ 1.2
COL16A1-215ENST00000488897 ATP5J2-PTCD1G3V325 749 aa22.53■■□□□ 1.2
COL16A1-215ENST00000488897 RPS6KA4O75676 772 aa22.52■■□□□ 1.2
COL16A1-215ENST00000488897 SLC15A2Q16348 729 aa22.52■■□□□ 1.2
COL16A1-215ENST00000488897 SOS1Q07889 1333 aaPredicted RBP22.52■■□□□ 1.2
COL16A1-215ENST00000488897 USPL1Q5W0Q7 1092 aa22.52■■□□□ 1.2
COL16A1-215ENST00000488897 LAMB4A4D0S4 1761 aa22.52■■□□□ 1.2
COL16A1-215ENST00000488897 CNTNAP4Q9C0A0 1308 aa22.51■■□□□ 1.19
COL16A1-215ENST00000488897 MAP3K2Q9Y2U5 619 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms