RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 TTC6Q86TZ1 520 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 ERO1AQ96HE7 468 aa19.13■□□□□ 0.65
MCF2L-229ENST00000488765 NEO1Q92859 1461 aa19.12■□□□□ 0.65
MCF2L-229ENST00000488765 NOP2P46087 812 aaKnown RBP19.12■□□□□ 0.65
MCF2L-229ENST00000488765 IL1RAPL2Q9NP60 686 aa19.12■□□□□ 0.65
MCF2L-229ENST00000488765 C14orf37Q86TY3 774 aa19.12■□□□□ 0.65
MCF2L-229ENST00000488765 CCDC69A6NI79 296 aa19.12■□□□□ 0.65
MCF2L-229ENST00000488765 TEX35Q5T0J7 233 aa19.12■□□□□ 0.65
MCF2L-229ENST00000488765 ANKRD44Q8N8A2 993 aa19.11■□□□□ 0.65
MCF2L-229ENST00000488765 TCEANC2Q96MN5 208 aa19.11■□□□□ 0.65
MCF2L-229ENST00000488765 PLEKHA4Q9H4M7 779 aa19.11■□□□□ 0.65
MCF2L-229ENST00000488765 SPG7Q9UQ90 795 aa19.11■□□□□ 0.65
MCF2L-229ENST00000488765 RAD50Q92878 1312 aa19.11■□□□□ 0.65
MCF2L-229ENST00000488765 RASEFQ8IZ41 740 aa19.11■□□□□ 0.65
MCF2L-229ENST00000488765 ADGRB3O60242 1522 aa19.11■□□□□ 0.65
MCF2L-229ENST00000488765 LAMC1P11047 1609 aa19.1■□□□□ 0.65
MCF2L-229ENST00000488765 FOSBP53539 338 aa19.1■□□□□ 0.65
MCF2L-229ENST00000488765 HOMER1Q86YM7 354 aa19.1■□□□□ 0.65
MCF2L-229ENST00000488765 SIRT1Q96EB6 747 aa19.1■□□□□ 0.65
MCF2L-229ENST00000488765 TSPYL1Q9H0U9 437 aa19.1■□□□□ 0.65
MCF2L-229ENST00000488765 CHMLP26374 656 aa19.1■□□□□ 0.65
MCF2L-229ENST00000488765 GNL2Q13823 731 aaKnown RBP19.1■□□□□ 0.65
MCF2L-229ENST00000488765 PTPN21Q16825 1174 aa19.1■□□□□ 0.65
MCF2L-229ENST00000488765 RUFY3Q7L099 469 aa19.1■□□□□ 0.65
MCF2L-229ENST00000488765 YTHDC2Q9H6S0 1430 aaKnown RBP19.09■□□□□ 0.65
MCF2L-229ENST00000488765 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
MCF2L-229ENST00000488765 MYOM1P52179 1685 aa19.09■□□□□ 0.65
MCF2L-229ENST00000488765 OAS2P29728 719 aaKnown RBP19.09■□□□□ 0.65
MCF2L-229ENST00000488765 BICD2Q8TD16 824 aa19.09■□□□□ 0.65
MCF2L-229ENST00000488765 GOLGA6L19H0YKK7 550 aa19.08■□□□□ 0.65
MCF2L-229ENST00000488765 PPFIA3O75145 1194 aa19.08■□□□□ 0.65
MCF2L-229ENST00000488765 NR1I2O75469 434 aa19.08■□□□□ 0.65
MCF2L-229ENST00000488765 FOXR1Q6PIV2 292 aa19.08■□□□□ 0.65
MCF2L-229ENST00000488765 TMCO3Q6UWJ1 677 aa19.08■□□□□ 0.65
MCF2L-229ENST00000488765 NUDT16Q96DE0 195 aaKnown RBP19.08■□□□□ 0.65
MCF2L-229ENST00000488765 CFAP44Q96MT7 982 aa19.08■□□□□ 0.65
MCF2L-229ENST00000488765 FAM53CQ9NYF3 392 aa19.08■□□□□ 0.65
MCF2L-229ENST00000488765 DIP2CQ9Y2E4 1556 aa19.08■□□□□ 0.65
MCF2L-229ENST00000488765 CCAR2Q8N163 923 aaKnown RBP19.08■□□□□ 0.64
MCF2L-229ENST00000488765 SHPRHQ149N8 1683 aa19.08■□□□□ 0.64
MCF2L-229ENST00000488765 CASQ1P31415 396 aa19.08■□□□□ 0.64
MCF2L-229ENST00000488765 NUTM1Q86Y26 1132 aa19.08■□□□□ 0.64
MCF2L-229ENST00000488765 FMNL2Q96PY5 1086 aa19.08■□□□□ 0.64
MCF2L-229ENST00000488765 ABCC4O15439 1325 aa19.07■□□□□ 0.64
MCF2L-229ENST00000488765 IFIT2P09913 472 aaKnown RBP19.07■□□□□ 0.64
MCF2L-229ENST00000488765 CASTP20810 708 aaKnown RBP19.07■□□□□ 0.64
MCF2L-229ENST00000488765 PLA2G4DQ86XP0 818 aa19.07■□□□□ 0.64
MCF2L-229ENST00000488765 MIS18AQ9NYP9 233 aa19.07■□□□□ 0.64
MCF2L-229ENST00000488765 API5Q9BZZ5 524 aaKnown RBP19.07■□□□□ 0.64
MCF2L-229ENST00000488765 PTPRCP08575 1304 aa19.07■□□□□ 0.64
MCF2L-229ENST00000488765 MTMR6Q9Y217 621 aa19.06■□□□□ 0.64
MCF2L-229ENST00000488765 SNW1Q13573 536 aaKnown RBP19.06■□□□□ 0.64
MCF2L-229ENST00000488765 TMEM87AQ8NBN3 555 aa19.06■□□□□ 0.64
MCF2L-229ENST00000488765 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
MCF2L-229ENST00000488765 ZSWIM4Q9H7M6 989 aa19.06■□□□□ 0.64
MCF2L-229ENST00000488765 CHRM1P11229 460 aaPredicted RBP19.06■□□□□ 0.64
MCF2L-229ENST00000488765 UBXN4Q92575 508 aa19.06■□□□□ 0.64
MCF2L-229ENST00000488765 DDX11Q96FC9 970 aa19.06■□□□□ 0.64
MCF2L-229ENST00000488765 SIGLEC1Q9BZZ2 1709 aa19.06■□□□□ 0.64
MCF2L-229ENST00000488765 METP08581 1390 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 SASH3O75995 380 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 COL9A3Q14050 684 aaPredicted RBP19.05■□□□□ 0.64
MCF2L-229ENST00000488765 ICE2Q659A1 982 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 CDC37L1Q7L3B6 337 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 EFCC1Q9HA90 598 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 DNAI1Q9UI46 699 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 KCNG1Q9UIX4 513 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 RRP15Q9Y3B9 282 aaKnown RBP19.05■□□□□ 0.64
MCF2L-229ENST00000488765 STK3Q13188 491 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 ATP6V1DQ9Y5K8 247 aa19.05■□□□□ 0.64
MCF2L-229ENST00000488765 SBNO2Q9Y2G9 1366 aa19.04■□□□□ 0.64
MCF2L-229ENST00000488765 BECN2A8MW95 431 aa19.04■□□□□ 0.64
MCF2L-229ENST00000488765 LARP1BQ659C4 914 aaKnown RBP19.04■□□□□ 0.64
MCF2L-229ENST00000488765 CWC27Q6UX04 472 aaKnown RBP19.04■□□□□ 0.64
MCF2L-229ENST00000488765 NYAP1Q6ZVC0 841 aa19.04■□□□□ 0.64
MCF2L-229ENST00000488765 ADGRB1O14514 1584 aa19.04■□□□□ 0.64
MCF2L-229ENST00000488765 URI1O94763 535 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-229ENST00000488765 C11orf57Q6ZUT1 292 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-229ENST00000488765 WASLO00401 505 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-229ENST00000488765 H2AFXP16104 143 aaPredicted RBP19.04■□□□□ 0.64
MCF2L-229ENST00000488765 TXLNBQ8N3L3 684 aa19.03■□□□□ 0.64
MCF2L-229ENST00000488765 PACS2Q86VP3 889 aa19.03■□□□□ 0.64
MCF2L-229ENST00000488765 COG3Q96JB2 828 aa19.03■□□□□ 0.64
MCF2L-229ENST00000488765 LMTK2Q8IWU2 1503 aa19.03■□□□□ 0.64
MCF2L-229ENST00000488765 LTKP29376 864 aa19.02■□□□□ 0.64
MCF2L-229ENST00000488765 ARHGAP45Q92619 1136 aa19.02■□□□□ 0.64
MCF2L-229ENST00000488765 LIMCH1Q9UPQ0 1083 aa19.02■□□□□ 0.64
MCF2L-229ENST00000488765 JRKLQ9Y4A0 524 aa19.02■□□□□ 0.64
MCF2L-229ENST00000488765 RIMS2Q9UQ26 1411 aa19.02■□□□□ 0.64
MCF2L-229ENST00000488765 SMC1AQ14683 1233 aaKnown RBP19.02■□□□□ 0.64
MCF2L-229ENST00000488765 FAM212AQ96EL1 285 aa19.02■□□□□ 0.64
MCF2L-229ENST00000488765 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.64
MCF2L-229ENST00000488765 TPM4P67936 248 aa19.02■□□□□ 0.63
MCF2L-229ENST00000488765 TTLL5Q6EMB2 1281 aa19.02■□□□□ 0.63
MCF2L-229ENST00000488765 MNS1Q8NEH6 495 aa19.02■□□□□ 0.63
MCF2L-229ENST00000488765 SPATA32Q96LK8 384 aa19.02■□□□□ 0.63
MCF2L-229ENST00000488765 CARD6Q9BX69 1037 aa19.02■□□□□ 0.63
MCF2L-229ENST00000488765 SNX14Q9Y5W7 946 aa19.02■□□□□ 0.63
MCF2L-229ENST00000488765 TULP4Q9NRJ4 1543 aa19.02■□□□□ 0.63
MCF2L-229ENST00000488765 NRXN1Q9ULB1 1477 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms