RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
ATPAF2-207ENST00000488753 TPTE2Q6XPS3 522 aa17.22■□□□□ 0.35
ATPAF2-207ENST00000488753 CNKSR1Q969H4 720 aa17.22■□□□□ 0.35
ATPAF2-207ENST00000488753 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
ATPAF2-207ENST00000488753 BABAM1Q9NWV8 329 aa17.22■□□□□ 0.35
ATPAF2-207ENST00000488753 KDM3BQ7LBC6 1761 aa17.21■□□□□ 0.35
ATPAF2-207ENST00000488753 ERVV-1B6SEH8 477 aa17.21■□□□□ 0.35
ATPAF2-207ENST00000488753 NFKBIEO00221 500 aa17.21■□□□□ 0.35
ATPAF2-207ENST00000488753 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
ATPAF2-207ENST00000488753 MASTLQ96GX5 879 aa17.21■□□□□ 0.35
ATPAF2-207ENST00000488753 NIP7Q9Y221 180 aaKnown RBP eCLIP17.21■□□□□ 0.35
ATPAF2-207ENST00000488753 ERBB4Q15303 1308 aa17.21■□□□□ 0.34
ATPAF2-207ENST00000488753 ANKRD31Q8N7Z5 1873 aa17.2■□□□□ 0.34
ATPAF2-207ENST00000488753 KLRG2A4D1S0 409 aaPredicted RBP17.2■□□□□ 0.34
ATPAF2-207ENST00000488753 RIPK4P57078 832 aa17.2■□□□□ 0.34
ATPAF2-207ENST00000488753 SOGA3Q5TF21 947 aa17.2■□□□□ 0.34
ATPAF2-207ENST00000488753 DLG5Q8TDM6 1919 aa17.19■□□□□ 0.34
ATPAF2-207ENST00000488753 TMPOP42166 694 aaKnown RBP17.19■□□□□ 0.34
ATPAF2-207ENST00000488753 RBM46Q8TBY0 533 aaKnown RBP17.19■□□□□ 0.34
ATPAF2-207ENST00000488753 TSPYL4Q9UJ04 414 aa17.19■□□□□ 0.34
ATPAF2-207ENST00000488753 LAMB4A4D0S4 1761 aa17.19■□□□□ 0.34
ATPAF2-207ENST00000488753 LTBP3Q9NS15 1303 aa17.19■□□□□ 0.34
ATPAF2-207ENST00000488753 C21orf2O43822 256 aa17.18■□□□□ 0.34
ATPAF2-207ENST00000488753 PRELPP51888 382 aa17.18■□□□□ 0.34
ATPAF2-207ENST00000488753 HLFQ16534 295 aa17.18■□□□□ 0.34
ATPAF2-207ENST00000488753 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
ATPAF2-207ENST00000488753 MAP3K15Q6ZN16 1313 aa17.18■□□□□ 0.34
ATPAF2-207ENST00000488753 GLTPD2A6NH11 291 aa17.17■□□□□ 0.34
ATPAF2-207ENST00000488753 SBF1O95248 1867 aa17.17■□□□□ 0.34
ATPAF2-207ENST00000488753 COL11A2P13942 1736 aaPredicted RBP17.17■□□□□ 0.34
ATPAF2-207ENST00000488753 NPR1P16066 1061 aa17.17■□□□□ 0.34
ATPAF2-207ENST00000488753 PRPF40BQ6NWY9 871 aaKnown RBP17.17■□□□□ 0.34
ATPAF2-207ENST00000488753 APLP1P51693 650 aa17.16■□□□□ 0.34
ATPAF2-207ENST00000488753 FSTL1Q12841 308 aa17.16■□□□□ 0.34
ATPAF2-207ENST00000488753 KIF6Q6ZMV9 814 aa17.16■□□□□ 0.34
ATPAF2-207ENST00000488753 NYXQ9GZU5 481 aa17.16■□□□□ 0.34
ATPAF2-207ENST00000488753 RRP7AQ9Y3A4 280 aaKnown RBP17.16■□□□□ 0.34
ATPAF2-207ENST00000488753 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATPAF2-207ENST00000488753 TAOK3Q9H2K8 898 aa17.15■□□□□ 0.34
ATPAF2-207ENST00000488753 RRAGCQ9HB90 399 aa17.15■□□□□ 0.34
ATPAF2-207ENST00000488753 IBTKQ9P2D0 1353 aaPredicted RBP17.15■□□□□ 0.34
ATPAF2-207ENST00000488753 MYL6BP14649 208 aa17.14■□□□□ 0.33
ATPAF2-207ENST00000488753 GTF2E1P29083 439 aaPredicted RBP17.14■□□□□ 0.33
ATPAF2-207ENST00000488753 NGEFQ8N5V2 710 aa17.14■□□□□ 0.33
ATPAF2-207ENST00000488753 C7orf43Q8WVR3 580 aa17.14■□□□□ 0.33
ATPAF2-207ENST00000488753 RUNDC1Q96C34 613 aa17.14■□□□□ 0.33
ATPAF2-207ENST00000488753 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
ATPAF2-207ENST00000488753 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-207ENST00000488753 VEGFAP15692 232 aaPredicted RBP17.13■□□□□ 0.33
ATPAF2-207ENST00000488753 ERFEQ4G0M1 354 aa17.13■□□□□ 0.33
ATPAF2-207ENST00000488753 DPY19L2Q6NUT2 758 aa17.13■□□□□ 0.33
ATPAF2-207ENST00000488753 TTLL7Q6ZT98 887 aa17.13■□□□□ 0.33
ATPAF2-207ENST00000488753 CRY2Q49AN0 593 aa17.12■□□□□ 0.33
ATPAF2-207ENST00000488753 CCDC93Q567U6 631 aa17.12■□□□□ 0.33
ATPAF2-207ENST00000488753 GIGYF2Q6Y7W6 1299 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-207ENST00000488753 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-207ENST00000488753 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
ATPAF2-207ENST00000488753 FAM177BA6PVY3 158 aa17.11■□□□□ 0.33
ATPAF2-207ENST00000488753 CHL1O00533 1208 aa17.11■□□□□ 0.33
ATPAF2-207ENST00000488753 ALDH1B1P30837 517 aa17.11■□□□□ 0.33
ATPAF2-207ENST00000488753 PDIA6Q15084 440 aa17.11■□□□□ 0.33
ATPAF2-207ENST00000488753 LRP10Q7Z4F1 713 aa17.11■□□□□ 0.33
ATPAF2-207ENST00000488753 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
ATPAF2-207ENST00000488753 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
ATPAF2-207ENST00000488753 ZBTB3Q9H5J0 574 aa17.11■□□□□ 0.33
ATPAF2-207ENST00000488753 ARFGEF2Q9Y6D5 1785 aa17.1■□□□□ 0.33
ATPAF2-207ENST00000488753 FER1L6Q2WGJ9 1857 aa17.1■□□□□ 0.33
ATPAF2-207ENST00000488753 PARP10Q53GL7 1025 aa17.1■□□□□ 0.33
ATPAF2-207ENST00000488753 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
ATPAF2-207ENST00000488753 ADAMTS8Q9UP79 889 aa17.1■□□□□ 0.33
ATPAF2-207ENST00000488753 SLX4Q8IY92 1834 aa17.1■□□□□ 0.33
ATPAF2-207ENST00000488753 EIF2S2P20042 333 aaKnown RBP17.09■□□□□ 0.33
ATPAF2-207ENST00000488753 NEUROD2Q15784 382 aa17.09■□□□□ 0.33
ATPAF2-207ENST00000488753 RTKN2Q8IZC4 609 aa17.09■□□□□ 0.33
ATPAF2-207ENST00000488753 TRIM35Q9UPQ4 493 aa17.09■□□□□ 0.33
ATPAF2-207ENST00000488753 UBN2Q6ZU65 1347 aa17.09■□□□□ 0.33
ATPAF2-207ENST00000488753 ABCC12Q96J65 1359 aa17.09■□□□□ 0.33
ATPAF2-207ENST00000488753 TIAM2Q8IVF5 1701 aa17.08■□□□□ 0.32
ATPAF2-207ENST00000488753 GPTP24298 496 aa17.08■□□□□ 0.32
ATPAF2-207ENST00000488753 FKBP4Q02790 459 aaKnown RBP eCLIP17.08■□□□□ 0.32
ATPAF2-207ENST00000488753 SUSD4Q5VX71 490 aa17.08■□□□□ 0.32
ATPAF2-207ENST00000488753 PPP1R42Q7Z4L9 355 aa17.08■□□□□ 0.32
ATPAF2-207ENST00000488753 NUTM1Q86Y26 1132 aa17.08■□□□□ 0.32
ATPAF2-207ENST00000488753 NTSR2O95665 410 aa17.07■□□□□ 0.32
ATPAF2-207ENST00000488753 HOXB7P09629 217 aa17.07■□□□□ 0.32
ATPAF2-207ENST00000488753 HOXA10P31260 410 aaPredicted RBP17.07■□□□□ 0.32
ATPAF2-207ENST00000488753 CC2D2BQ6DHV5 1058 aa17.07■□□□□ 0.32
ATPAF2-207ENST00000488753 RNF123Q5XPI4 1314 aa17.06■□□□□ 0.32
ATPAF2-207ENST00000488753 POTECB2RU33 542 aa17.06■□□□□ 0.32
ATPAF2-207ENST00000488753 PROSER3Q2NL68 480 aa17.06■□□□□ 0.32
ATPAF2-207ENST00000488753 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
ATPAF2-207ENST00000488753 HSP90AB3PQ58FF7 597 aa17.06■□□□□ 0.32
ATPAF2-207ENST00000488753 DNAJC5GQ8N7S2 189 aa17.06■□□□□ 0.32
ATPAF2-207ENST00000488753 DDX21Q9NR30 783 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATPAF2-207ENST00000488753 NUP98P52948 1817 aa17.05■□□□□ 0.32
ATPAF2-207ENST00000488753 WDR90Q96KV7 1748 aa17.05■□□□□ 0.32
ATPAF2-207ENST00000488753 RPGRQ92834 1020 aaKnown RBP17.05■□□□□ 0.32
ATPAF2-207ENST00000488753 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
ATPAF2-207ENST00000488753 SLC10A5Q5PT55 438 aa17.04■□□□□ 0.32
ATPAF2-207ENST00000488753 COPS6Q7L5N1 327 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms