RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 TMOD3Q9NYL9 352 aa8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 C5P01031 1676 aa8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 COL14A1Q05707 1796 aaKnown RBP8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 KCPQ6ZWJ8 1503 aa8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 USP42Q9H9J4 1324 aaKnown RBP8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 GLI3P10071 1580 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 COL15A1P39059 1388 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 H7C1W4 665 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 TOM1O60784 492 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 CASP7P55210 303 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 TTLL7Q6ZT98 887 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 NUTM1Q86Y26 1132 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 ERC1Q8IUD2 1116 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 IL1RAPL2Q9NP60 686 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 ASAP1Q9ULH1 1129 aa8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 THRAP3Q9Y2W1 955 aaKnown RBP8.28□□□□□ -1.08
RN7SL561P-201ENST00000488553 ERC2O15083 957 aa8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 CHMLP26374 656 aa8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 RABL6Q3YEC7 729 aaPredicted RBP8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 EPHA10Q5JZY3 1008 aa8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 TSHZ3Q63HK5 1081 aa8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 PI4K2BQ8TCG2 481 aa8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 ANTXR1Q9H6X2 564 aa8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 SPATA31A1Q5TZJ5 1347 aa8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 TTC41PQ6P2S7 1318 aa8.27□□□□□ -1.09
RN7SL561P-201ENST00000488553 SHANK3Q9BYB0 1731 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 COL16A1Q07092 1604 aaPredicted RBP8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 A0A087WZG4 1122 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 ATP5J2-PTCD1G3V325 749 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 SASH1O94885 1247 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 REC8O95072 547 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 ADAMTS2O95450 1211 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 RFX5P48382 616 aaPredicted RBP8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 FOXO4P98177 505 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 TRIM28Q13263 835 aaKnown RBP8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 G3BP1Q13283 466 aaKnown RBP eCLIP8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 CLASRPQ8N2M8 674 aaKnown RBP8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 CCDC191Q8NCU4 936 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 COPRSQ9NQ92 184 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 PA2G4Q9UQ80 394 aaKnown RBP8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 BCL9O00512 1426 aa8.26□□□□□ -1.09
RN7SL561P-201ENST00000488553 PAPPAQ13219 1627 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 STARD3NLO95772 234 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 PRIM1P49642 420 aaKnown RBP8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 PIP4K2BP78356 416 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 OS9Q13438 667 aaPredicted RBP8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 NBR1Q14596 966 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 UNC5CLQ8IV45 518 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 DNAJC10Q8IXB1 793 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 JARID2Q92833 1246 aaPredicted RBP8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 SLC4A9Q96Q91 983 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 ESYT1Q9BSJ8 1104 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 ISCA1Q9BUE6 129 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 ECHDC1Q9NTX5 307 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 CWC25Q9NXE8 425 aaPredicted RBP8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 SPATA31A5Q5VU36 1347 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 SPATA31A7Q8IWB4 1347 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 UBR2Q8IWV8 1755 aa8.25□□□□□ -1.09
RN7SL561P-201ENST00000488553 NUTM2BA6NNL0 878 aaPredicted RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 NUTM2EB1AL46 878 aaPredicted RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 TRIM6-TRIM34B2RNG4 842 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 EPB41L2O43491 1005 aaKnown RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 GLRX3O76003 335 aaKnown RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 IFIT2P09913 472 aaKnown RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 CYP19A1P11511 503 aaPredicted RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 MYT1Q01538 1121 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 PTPN12Q05209 780 aaKnown RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 TCIRG1Q13488 830 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 RABEP1Q15276 862 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 NFKBIBQ15653 356 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 BARGINQ6ZT62 677 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 UBE3BQ7Z3V4 1068 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 NUTM2AQ8IVF1 878 aaPredicted RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 HSCBQ8IWL3 235 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 RILPL2Q969X0 211 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 EAF2Q96CJ1 260 aaPredicted RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 IL17RAQ96F46 866 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 RBM42Q9BTD8 480 aaKnown RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 ZBTB3Q9H5J0 574 aa8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.24□□□□□ -1.09
RN7SL561P-201ENST00000488553 LRP6O75581 1613 aa8.23□□□□□ -1.09
RN7SL561P-201ENST00000488553 DDIT3P35638 169 aa8.23□□□□□ -1.09
RN7SL561P-201ENST00000488553 DDB1Q16531 1140 aa8.23□□□□□ -1.09
RN7SL561P-201ENST00000488553 LMBR1LQ6UX01 489 aa8.23□□□□□ -1.09
RN7SL561P-201ENST00000488553 MARCH10Q8NA82 808 aaPredicted RBP8.23□□□□□ -1.09
RN7SL561P-201ENST00000488553 KLHDC4Q8TBB5 520 aa8.23□□□□□ -1.09
RN7SL561P-201ENST00000488553 SLIT2O94813 1529 aa8.23□□□□□ -1.09
RN7SL561P-201ENST00000488553 TOGARAM1Q9Y4F4 1720 aa8.23□□□□□ -1.09
RN7SL561P-201ENST00000488553 LAMB4A4D0S4 1761 aa8.22□□□□□ -1.09
RN7SL561P-201ENST00000488553 UBAP1LF5GYI3 381 aa8.22□□□□□ -1.09
RN7SL561P-201ENST00000488553 CD2BP2O95400 341 aaKnown RBP8.22□□□□□ -1.09
RN7SL561P-201ENST00000488553 MAP4K4O95819 1239 aaPredicted RBP8.22□□□□□ -1.09
RN7SL561P-201ENST00000488553 AACSQ86V21 672 aa8.22□□□□□ -1.09
RN7SL561P-201ENST00000488553 CNTROBQ8N137 903 aa8.22□□□□□ -1.09
RN7SL561P-201ENST00000488553 GPATCH3Q96I76 525 aa8.22□□□□□ -1.09
RN7SL561P-201ENST00000488553 PHLPP1O60346 1717 aa8.22□□□□□ -1.09
RN7SL561P-201ENST00000488553 PLCH1Q4KWH8 1693 aa8.21□□□□□ -1.09
RN7SL561P-201ENST00000488553 SGSM2O43147 1006 aa8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 PCCAP05165 728 aaPredicted RBP8.21□□□□□ -1.1
RN7SL561P-201ENST00000488553 ANAPC15P60006 121 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms