RNA–Protein interactions for RNA: ENST00000488144.5

LCLAT1-210, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-210ENST00000488144 CHRDL2Q6WN34 429 aa9.58□□□□□ -0.88
LCLAT1-210ENST00000488144 SYNE4Q8N205 404 aa9.58□□□□□ -0.88
LCLAT1-210ENST00000488144 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
LCLAT1-210ENST00000488144 FAM155AB1AL88 458 aaPredicted RBP9.57□□□□□ -0.88
LCLAT1-210ENST00000488144 LMOD1P29536 600 aaPredicted RBP9.57□□□□□ -0.88
LCLAT1-210ENST00000488144 AMPHP49418 695 aa9.57□□□□□ -0.88
LCLAT1-210ENST00000488144 KIF23Q02241 960 aaPredicted RBP9.57□□□□□ -0.88
LCLAT1-210ENST00000488144 USPL1Q5W0Q7 1092 aa9.57□□□□□ -0.88
LCLAT1-210ENST00000488144 ZNF408Q9H9D4 720 aa9.57□□□□□ -0.88
LCLAT1-210ENST00000488144 HDAC9Q9UKV0 1011 aa9.57□□□□□ -0.88
LCLAT1-210ENST00000488144 H0YGN5 161 aa9.56□□□□□ -0.88
LCLAT1-210ENST00000488144 ZPR1O75312 459 aa9.56□□□□□ -0.88
LCLAT1-210ENST00000488144 COL9A1P20849 921 aa9.56□□□□□ -0.88
LCLAT1-210ENST00000488144 CRKLP46109 303 aaKnown RBP9.56□□□□□ -0.88
LCLAT1-210ENST00000488144 USP50Q70EL3 339 aaPredicted RBP9.56□□□□□ -0.88
LCLAT1-210ENST00000488144 RBM27Q9P2N5 1060 aaKnown RBP9.56□□□□□ -0.88
LCLAT1-210ENST00000488144 TJP1Q07157 1748 aa9.56□□□□□ -0.88
LCLAT1-210ENST00000488144 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 RTL1A6NKG5 1358 aa9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 FZD9O00144 591 aa9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 EPS15P42566 896 aa9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 HUNKP57058 714 aa9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 NCBP3Q53F19 620 aaKnown RBP9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 PRPF40BQ6NWY9 871 aaKnown RBP9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 ZNF277Q9NRM2 450 aaPredicted RBP9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 PDZRN3Q9UPQ7 1066 aa9.55□□□□□ -0.88
LCLAT1-210ENST00000488144 PLA2G5P39877 138 aa9.54□□□□□ -0.88
LCLAT1-210ENST00000488144 SCNN1DP51172 638 aa9.54□□□□□ -0.88
LCLAT1-210ENST00000488144 ZNF296Q8WUU4 475 aaPredicted RBP9.54□□□□□ -0.88
LCLAT1-210ENST00000488144 GLIS2Q9BZE0 524 aaPredicted RBP9.54□□□□□ -0.88
LCLAT1-210ENST00000488144 KIAA0100Q14667 2235 aaKnown RBP9.54□□□□□ -0.88
LCLAT1-210ENST00000488144 PDE6BP35913 854 aa9.53□□□□□ -0.88
LCLAT1-210ENST00000488144 FKBP4Q02790 459 aaKnown RBP eCLIP9.53□□□□□ -0.88
LCLAT1-210ENST00000488144 INTS3Q68E01 1043 aaKnown RBP9.53□□□□□ -0.88
LCLAT1-210ENST00000488144 CNKSR1Q969H4 720 aa9.53□□□□□ -0.88
LCLAT1-210ENST00000488144 GJA3Q9Y6H8 435 aa9.53□□□□□ -0.88
LCLAT1-210ENST00000488144 EDC4Q6P2E9 1401 aaKnown RBP9.53□□□□□ -0.88
LCLAT1-210ENST00000488144 EN2P19622 333 aaPredicted RBP9.52□□□□□ -0.89
LCLAT1-210ENST00000488144 CCDC93Q567U6 631 aa9.52□□□□□ -0.89
LCLAT1-210ENST00000488144 RGMBQ6NW40 437 aa9.52□□□□□ -0.89
LCLAT1-210ENST00000488144 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
LCLAT1-210ENST00000488144 BRIP1Q9BX63 1249 aa9.52□□□□□ -0.89
LCLAT1-210ENST00000488144 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
LCLAT1-210ENST00000488144 FBLN1P23142 703 aa9.51□□□□□ -0.89
LCLAT1-210ENST00000488144 IARSP41252 1262 aaKnown RBP9.51□□□□□ -0.89
LCLAT1-210ENST00000488144 TRIM26Q12899 539 aaPredicted RBP9.51□□□□□ -0.89
LCLAT1-210ENST00000488144 STYK1Q6J9G0 422 aa9.51□□□□□ -0.89
LCLAT1-210ENST00000488144 CCDC24Q8N4L8 307 aa9.51□□□□□ -0.89
LCLAT1-210ENST00000488144 CSRNP1Q96S65 589 aa9.51□□□□□ -0.89
LCLAT1-210ENST00000488144 SPG7Q9UQ90 795 aa9.51□□□□□ -0.89
LCLAT1-210ENST00000488144 INTS5Q6P9B9 1019 aaKnown RBP9.5□□□□□ -0.89
LCLAT1-210ENST00000488144 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.5□□□□□ -0.89
LCLAT1-210ENST00000488144 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
LCLAT1-210ENST00000488144 NARFQ9UHQ1 456 aa9.5□□□□□ -0.89
LCLAT1-210ENST00000488144 RAPGEFL1Q9UHV5 662 aa9.5□□□□□ -0.89
LCLAT1-210ENST00000488144 COL4A5P29400 1685 aa9.5□□□□□ -0.89
LCLAT1-210ENST00000488144 ANKRD26Q9UPS8 1709 aa9.5□□□□□ -0.89
LCLAT1-210ENST00000488144 ERBB4Q15303 1308 aa9.5□□□□□ -0.89
LCLAT1-210ENST00000488144 SOX1O00570 391 aaPredicted RBP9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 ZNF157P51786 506 aaPredicted RBP9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 EIF6P56537 245 aaKnown RBP9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 C7orf43Q8WVR3 580 aa9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 FAM122AQ96E09 287 aa9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 ADARB2Q9NS39 739 aaKnown RBP9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 STXBP5LQ9Y2K9 1186 aa9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 SOS1Q07889 1333 aaPredicted RBP9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 MUC3AQ02505 3323 aa9.49□□□□□ -0.89
LCLAT1-210ENST00000488144 CACNA1AO00555 2505 aa9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 SLC10A3P09131 477 aa9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 SRGNP10124 158 aa9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 PHKG2P15735 406 aa9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 PPARGC1BQ86YN6 1023 aaKnown RBP9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 JDP2Q8WYK2 163 aa9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 LRCH3Q96II8 777 aa9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 PRO3102Q9H379 93 aa9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 COL15A1P39059 1388 aa9.48□□□□□ -0.89
LCLAT1-210ENST00000488144 PTCD1O75127 700 aaKnown RBP9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 TBC1D8O95759 1140 aa9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 PRR5LQ6MZQ0 368 aa9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 REM2Q8IYK8 340 aaPredicted RBP9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 IFNL2Q8IZJ0 200 aa9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 PGAP2Q9UHJ9 254 aa9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 EYSQ5T1H1 3165 aa9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 A0A1W2PP64 1363 aa9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 NCAPD2Q15021 1401 aa9.47□□□□□ -0.89
LCLAT1-210ENST00000488144 GPR25O00155 361 aa9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 RRS1Q15050 365 aaKnown RBP9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 NOM1Q5C9Z4 860 aaKnown RBP9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 OLFM4Q6UX06 510 aa9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 CDC37L1Q7L3B6 337 aa9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 HDGFL2Q7Z4V5 671 aaPredicted RBP9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 MASTLQ96GX5 879 aa9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 SNX27Q96L92 541 aa9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 GPRC5DQ9NZD1 345 aa9.46□□□□□ -0.9
LCLAT1-210ENST00000488144 ERVV-2B6SEH9 535 aa9.45□□□□□ -0.9
LCLAT1-210ENST00000488144 ANKRD13DQ6ZTN6 518 aa9.45□□□□□ -0.9
LCLAT1-210ENST00000488144 RTKN2Q8IZC4 609 aa9.45□□□□□ -0.9
LCLAT1-210ENST00000488144 COG3Q96JB2 828 aa9.45□□□□□ -0.9
LCLAT1-210ENST00000488144 GBA2Q9HCG7 927 aaPredicted RBP9.45□□□□□ -0.9
LCLAT1-210ENST00000488144 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms