RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 NPAS3Q8IXF0 933 aa7□□□□□ -1.29
ECHDC1-217ENST00000488087 QTRT2Q9H974 415 aaKnown RBP7□□□□□ -1.29
ECHDC1-217ENST00000488087 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 DGKZQ13574 1117 aa6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 HIF1AQ16665 826 aa6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 EFHC2Q5JST6 749 aa6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 COX20Q5RI15 118 aa6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 TXNDC2Q86VQ3 553 aa6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 MYO19Q96H55 970 aa6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 SAP130Q9H0E3 1048 aa6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 ANO2Q9NQ90 1003 aa6.99□□□□□ -1.29
ECHDC1-217ENST00000488087 A0A1W2PNR3 127 aa6.98□□□□□ -1.29
ECHDC1-217ENST00000488087 ZNF211Q13398 564 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-217ENST00000488087 KLK14Q9P0G3 267 aa6.98□□□□□ -1.29
ECHDC1-217ENST00000488087 LRFN2Q9ULH4 789 aa6.98□□□□□ -1.29
ECHDC1-217ENST00000488087 GNEQ9Y223 722 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-217ENST00000488087 GPC6Q9Y625 555 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-217ENST00000488087 H7C1W4 665 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 ITGA6P23229 1130 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 MTMR3Q13615 1198 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 C11orf91Q3C1V1 193 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 LRRC69Q6ZNQ3 347 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 HELQQ8TDG4 1101 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 HSH2DQ96JZ2 352 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 ZIC5Q96T25 663 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 CRISPLD1Q9H336 500 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 ANKIB1Q9P2G1 1089 aa6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 DNMT3AQ9Y6K1 912 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-217ENST00000488087 CDC14CA4D256 554 aa6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 H3BRB1 525 aa6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 PPFIA3O75145 1194 aa6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 GLYCTKQ8IVS8 523 aa6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 SUSD3Q96L08 255 aa6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 NUCKS1Q9H1E3 243 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 TUT1Q9H6E5 874 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 EGFL7Q9UHF1 273 aa6.96□□□□□ -1.3
ECHDC1-217ENST00000488087 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 SF3B2Q13435 895 aaKnown RBP6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 NLRP8Q86W28 1048 aa6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 TRIM22Q8IYM9 498 aa6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 ZNF280CQ8ND82 737 aa6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 C7orf43Q8WVR3 580 aa6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 KLRG1Q96E93 195 aa6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 IFT43Q96FT9 208 aa6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 CUEDC1Q9NWM3 386 aaPredicted RBP6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 STIM2Q9P246 746 aa6.95□□□□□ -1.3
ECHDC1-217ENST00000488087 TGFBR3LH3BV60 316 aa6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 VEGFBP49765 207 aa6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 TRIM26Q12899 539 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 AAMPQ13685 434 aa6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 LBRQ14739 615 aaKnown RBP6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 DBN1Q16643 649 aa6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 FIGNL1Q6PIW4 674 aa6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 ABTB2Q8N961 1025 aa6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 GZF1Q9H116 711 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 BIN2Q9UBW5 565 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-217ENST00000488087 SOWAHDA6NJG2 315 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 TNFRSF10BO14763 440 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 ICMTO60725 284 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 FAM13AO94988 1023 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 MPSTP25325 297 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 FOXR1Q6PIV2 292 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 VWA5B2Q8N398 1253 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 ZNF837Q96EG3 531 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 GMCL1Q96IK5 515 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 CEP63Q96MT8 703 aa6.93□□□□□ -1.3
ECHDC1-217ENST00000488087 H3BM21 787 aa6.92□□□□□ -1.3
ECHDC1-217ENST00000488087 SV2AQ7L0J3 742 aa6.92□□□□□ -1.3
ECHDC1-217ENST00000488087 TREML1Q86YW5 311 aa6.92□□□□□ -1.3
ECHDC1-217ENST00000488087 ETFBKMTQ8IXQ9 262 aa6.92□□□□□ -1.3
ECHDC1-217ENST00000488087 GTPBP3Q969Y2 492 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-217ENST00000488087 ZCCHC2Q9C0B9 1178 aaKnown RBP6.92□□□□□ -1.3
ECHDC1-217ENST00000488087 BCS1LQ9Y276 419 aa6.92□□□□□ -1.3
ECHDC1-217ENST00000488087 DCDC2BA2VCK2 349 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 ATXN7O15265 892 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 MICAL2O94851 1124 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 THBS1P07996 1170 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 IDH3AP50213 366 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 KCNMA1Q12791 1236 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 NOM1Q5C9Z4 860 aaKnown RBP6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 FAM26DQ5JW98 314 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 IER5Q5VY09 327 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 BTLAQ7Z6A9 289 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 TRERF1Q96PN7 1200 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 PCDHGC4Q9Y5F7 938 aa6.91□□□□□ -1.3
ECHDC1-217ENST00000488087 GPR25O00155 361 aa6.9□□□□□ -1.3
ECHDC1-217ENST00000488087 KHNYNO15037 678 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-217ENST00000488087 ZBTB39O15060 712 aa6.9□□□□□ -1.3
ECHDC1-217ENST00000488087 EIF1AXP47813 144 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-217ENST00000488087 SAMD5Q5TGI4 173 aa6.9□□□□□ -1.3
ECHDC1-217ENST00000488087 ALKBH2Q6NS38 261 aa6.9□□□□□ -1.3
ECHDC1-217ENST00000488087 PHF24Q9UPV7 400 aa6.9□□□□□ -1.3
ECHDC1-217ENST00000488087 EPB42P16452 691 aa6.89□□□□□ -1.31
ECHDC1-217ENST00000488087 ZAP70P43403 619 aa6.89□□□□□ -1.31
ECHDC1-217ENST00000488087 ARSDP51689 593 aa6.89□□□□□ -1.31
ECHDC1-217ENST00000488087 TYRO3Q06418 890 aa6.89□□□□□ -1.31
ECHDC1-217ENST00000488087 SND1Q7KZF4 910 aaKnown RBP eCLIP6.89□□□□□ -1.31
ECHDC1-217ENST00000488087 ATCAYQ86WG3 371 aa6.89□□□□□ -1.31
ECHDC1-217ENST00000488087 BRD7Q9NPI1 651 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms