RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 RPS6KA4O75676 772 aa21.44■■□□□ 1.02
NF1-211ENST00000487476 RREB1Q92766 1687 aa21.43■■□□□ 1.02
NF1-211ENST00000487476 ABCC4O15439 1325 aa21.43■■□□□ 1.02
NF1-211ENST00000487476 PDE3AQ14432 1141 aa21.43■■□□□ 1.02
NF1-211ENST00000487476 RIC3Q7Z5B4 369 aa21.43■■□□□ 1.02
NF1-211ENST00000487476 COG6Q9Y2V7 657 aa21.43■■□□□ 1.02
NF1-211ENST00000487476 CACNA1FO60840 1977 aa21.43■■□□□ 1.02
NF1-211ENST00000487476 PHF14O94880 888 aa21.43■■□□□ 1.02
NF1-211ENST00000487476 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
NF1-211ENST00000487476 DDX58O95786 925 aaKnown RBP21.42■■□□□ 1.02
NF1-211ENST00000487476 DZIP3Q86Y13 1208 aaKnown RBP21.42■■□□□ 1.02
NF1-211ENST00000487476 CRBNQ96SW2 442 aa21.42■■□□□ 1.02
NF1-211ENST00000487476 COL15A1P39059 1388 aa21.42■■□□□ 1.02
NF1-211ENST00000487476 NPM2Q86SE8 214 aaKnown RBP21.41■■□□□ 1.02
NF1-211ENST00000487476 DNAAF4Q8WXU2 420 aa21.41■■□□□ 1.02
NF1-211ENST00000487476 ANP32EQ9BTT0 268 aa21.41■■□□□ 1.02
NF1-211ENST00000487476 PLBD2Q8NHP8 589 aa21.41■■□□□ 1.02
NF1-211ENST00000487476 AKT1S1Q96B36 256 aa21.41■■□□□ 1.02
NF1-211ENST00000487476 HLFQ16534 295 aa21.4■■□□□ 1.02
NF1-211ENST00000487476 ANO8Q9HCE9 1232 aaPredicted RBP21.4■■□□□ 1.02
NF1-211ENST00000487476 KIF6Q6ZMV9 814 aa21.4■■□□□ 1.02
NF1-211ENST00000487476 ARHGEF1Q92888 912 aaKnown RBP21.4■■□□□ 1.02
NF1-211ENST00000487476 RGPD3A6NKT7 1758 aaPredicted RBP21.4■■□□□ 1.02
NF1-211ENST00000487476 RGPD4Q7Z3J3 1758 aa21.4■■□□□ 1.02
NF1-211ENST00000487476 ITPRIPQ8IWB1 547 aa21.39■■□□□ 1.02
NF1-211ENST00000487476 EXOC6Q8TAG9 804 aa21.39■■□□□ 1.02
NF1-211ENST00000487476 MAP3K15Q6ZN16 1313 aa21.39■■□□□ 1.01
NF1-211ENST00000487476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.39■■□□□ 1.01
NF1-211ENST00000487476 CAMTA2O94983 1202 aa21.38■■□□□ 1.01
NF1-211ENST00000487476 BEND3Q5T5X7 828 aa21.38■■□□□ 1.01
NF1-211ENST00000487476 MYD88Q99836 296 aa21.38■■□□□ 1.01
NF1-211ENST00000487476 TFCP2L1Q9NZI6 479 aa21.38■■□□□ 1.01
NF1-211ENST00000487476 SRP68Q9UHB9 627 aaKnown RBP21.38■■□□□ 1.01
NF1-211ENST00000487476 MS4A1P11836 297 aa21.38■■□□□ 1.01
NF1-211ENST00000487476 INTS3Q68E01 1043 aaKnown RBP21.38■■□□□ 1.01
NF1-211ENST00000487476 METTL22Q9BUU2 404 aaPredicted RBP21.38■■□□□ 1.01
NF1-211ENST00000487476 ATP5J2-PTCD1G3V325 749 aa21.37■■□□□ 1.01
NF1-211ENST00000487476 MVPQ14764 893 aaKnown RBP21.37■■□□□ 1.01
NF1-211ENST00000487476 CWF19L2Q2TBE0 894 aaKnown RBP21.37■■□□□ 1.01
NF1-211ENST00000487476 TRAPPC3LQ5T215 181 aa21.37■■□□□ 1.01
NF1-211ENST00000487476 IGKV5-2P06315 115 aa21.36■■□□□ 1.01
NF1-211ENST00000487476 RBM19Q9Y4C8 960 aaKnown RBP21.36■■□□□ 1.01
NF1-211ENST00000487476 A0A087WZG4 1122 aa21.35■■□□□ 1.01
NF1-211ENST00000487476 ERVV-1B6SEH8 477 aa21.34■■□□□ 1.01
NF1-211ENST00000487476 SSFA2P28290 1259 aa21.34■■□□□ 1.01
NF1-211ENST00000487476 CCT4P50991 539 aaKnown RBP21.34■■□□□ 1.01
NF1-211ENST00000487476 USPL1Q5W0Q7 1092 aa21.34■■□□□ 1.01
NF1-211ENST00000487476 GIGYF2Q6Y7W6 1299 aaKnown RBP21.34■■□□□ 1.01
NF1-211ENST00000487476 SRCIN1Q9C0H9 1055 aa21.34■■□□□ 1.01
NF1-211ENST00000487476 RFC4P35249 363 aa21.34■■□□□ 1.01
NF1-211ENST00000487476 SLC15A2Q16348 729 aa21.33■■□□□ 1.01
NF1-211ENST00000487476 BCL2L12Q9HB09 334 aa21.33■■□□□ 1.01
NF1-211ENST00000487476 NARFQ9UHQ1 456 aa21.33■■□□□ 1.01
NF1-211ENST00000487476 UBR3Q6ZT12 1888 aa21.33■■□□□ 1.01
NF1-211ENST00000487476 HMGB2P26583 209 aaKnown RBP21.32■■□□□ 1
NF1-211ENST00000487476 TCIRG1Q13488 830 aa21.32■■□□□ 1
NF1-211ENST00000487476 LINS1Q8NG48 757 aa21.32■■□□□ 1
NF1-211ENST00000487476 ARFGEF2Q9Y6D5 1785 aa21.32■■□□□ 1
NF1-211ENST00000487476 ZPR1O75312 459 aa21.32■■□□□ 1
NF1-211ENST00000487476 ADRA2BP18089 450 aa21.32■■□□□ 1
NF1-211ENST00000487476 GPTP24298 496 aa21.32■■□□□ 1
NF1-211ENST00000487476 NEXNQ0ZGT2 675 aa21.32■■□□□ 1
NF1-211ENST00000487476 COL23A1Q86Y22 540 aaPredicted RBP21.32■■□□□ 1
NF1-211ENST00000487476 NUP188Q5SRE5 1749 aa21.32■■□□□ 1
NF1-211ENST00000487476 NEURL1BA8MQ27 555 aa21.31■■□□□ 1
NF1-211ENST00000487476 ZBTB7BO15156 539 aaPredicted RBP21.31■■□□□ 1
NF1-211ENST00000487476 STK32BQ9NY57 414 aa21.31■■□□□ 1
NF1-211ENST00000487476 ATP10DQ9P241 1426 aa21.31■■□□□ 1
NF1-211ENST00000487476 MEIS3Q99687 375 aa21.31■■□□□ 1
NF1-211ENST00000487476 PNPLA7Q6ZV29 1317 aa21.31■■□□□ 1
NF1-211ENST00000487476 USP42Q9H9J4 1324 aaKnown RBP21.31■■□□□ 1
NF1-211ENST00000487476 PXDNLA1KZ92 1463 aa21.31■■□□□ 1
NF1-211ENST00000487476 JARID2Q92833 1246 aaPredicted RBP21.3■■□□□ 1
NF1-211ENST00000487476 ISCA1Q9BUE6 129 aa21.3■■□□□ 1
NF1-211ENST00000487476 USP44Q9H0E7 712 aa21.3■■□□□ 1
NF1-211ENST00000487476 DDX19BQ9UMR2 479 aa21.3■■□□□ 1
NF1-211ENST00000487476 MSH5O43196 834 aa21.29■■□□□ 1
NF1-211ENST00000487476 UBN2Q6ZU65 1347 aa21.28■■□□□ 1
NF1-211ENST00000487476 ALDH1L1O75891 902 aa21.28■■□□□ 1
NF1-211ENST00000487476 GCKRQ14397 625 aa21.28■■□□□ 1
NF1-211ENST00000487476 ZNF34Q8IZ26 560 aa21.28■■□□□ 1
NF1-211ENST00000487476 PDGFDQ9GZP0 370 aaPredicted RBP21.28■■□□□ 1
NF1-211ENST00000487476 TBC1D9BQ66K14 1250 aa21.27■■□□□ 1
NF1-211ENST00000487476 BICDL1Q6ZP65 573 aa21.27■■□□□ 1
NF1-211ENST00000487476 C4AP0C0L4 1744 aa21.27■■□□□ 1
NF1-211ENST00000487476 NBPF7P0C2Y1 421 aaPredicted RBP21.27■■□□□ 1
NF1-211ENST00000487476 GYS1P13807 737 aa21.27■■□□□ 1
NF1-211ENST00000487476 CLEC4GQ6UXB4 293 aa21.27■■□□□ 1
NF1-211ENST00000487476 C1orf115Q9H7X2 142 aa21.27■■□□□ 1
NF1-211ENST00000487476 ZBTB40Q9NUA8 1239 aa21.27■■□□□ 1
NF1-211ENST00000487476 TUBGCP6Q96RT7 1819 aa21.27■■□□□ 1
NF1-211ENST00000487476 RTL5Q5HYW3 569 aaPredicted RBP21.26■□□□□ 0.99
NF1-211ENST00000487476 NLRP10Q86W26 655 aa21.26■□□□□ 0.99
NF1-211ENST00000487476 NIP7Q9Y221 180 aaKnown RBP eCLIP21.26■□□□□ 0.99
NF1-211ENST00000487476 ZNF652Q9Y2D9 606 aa21.26■□□□□ 0.99
NF1-211ENST00000487476 HSP90AB3PQ58FF7 597 aa21.26■□□□□ 0.99
NF1-211ENST00000487476 FAM177BA6PVY3 158 aa21.25■□□□□ 0.99
NF1-211ENST00000487476 TRIM28Q13263 835 aaKnown RBP21.25■□□□□ 0.99
NF1-211ENST00000487476 CWC25Q9NXE8 425 aaPredicted RBP21.25■□□□□ 0.99
NF1-211ENST00000487476 C9orf78Q9NZ63 289 aaPredicted RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms