RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 ATP5J2-PTCD1G3V325 749 aa18.26■□□□□ 0.51
GCA-210ENST00000487445 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
GCA-210ENST00000487445 DZIP3Q86Y13 1208 aaKnown RBP18.26■□□□□ 0.51
GCA-210ENST00000487445 LRRC4BQ9NT99 713 aa18.26■□□□□ 0.51
GCA-210ENST00000487445 BTAF1O14981 1849 aa18.24■□□□□ 0.51
GCA-210ENST00000487445 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
GCA-210ENST00000487445 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
GCA-210ENST00000487445 USP44Q9H0E7 712 aa18.24■□□□□ 0.51
GCA-210ENST00000487445 ALDH1L1O75891 902 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 GNAI3P08754 354 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 C9orf78Q9NZ63 289 aaPredicted RBP18.23■□□□□ 0.51
GCA-210ENST00000487445 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 TJP1Q07157 1748 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 GNPATO15228 680 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 UBTFL1P0CB47 393 aaPredicted RBP18.23■□□□□ 0.51
GCA-210ENST00000487445 TXNRD1Q16881 649 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 SLC27A3Q5K4L6 730 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 SMIM5Q71RC9 77 aa18.23■□□□□ 0.51
GCA-210ENST00000487445 NEURL1BA8MQ27 555 aa18.22■□□□□ 0.51
GCA-210ENST00000487445 IGHDP01880 384 aa18.22■□□□□ 0.51
GCA-210ENST00000487445 NBPF7P0C2Y1 421 aaPredicted RBP18.22■□□□□ 0.51
GCA-210ENST00000487445 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
GCA-210ENST00000487445 PLSCR1O15162 318 aa18.21■□□□□ 0.51
GCA-210ENST00000487445 GNAI2P04899 355 aa18.21■□□□□ 0.51
GCA-210ENST00000487445 HLFQ16534 295 aa18.21■□□□□ 0.51
GCA-210ENST00000487445 AK7Q96M32 723 aa18.21■□□□□ 0.51
GCA-210ENST00000487445 PROM2Q8N271 834 aa18.21■□□□□ 0.51
GCA-210ENST00000487445 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
GCA-210ENST00000487445 RTCBQ9Y3I0 505 aaKnown RBP18.21■□□□□ 0.51
GCA-210ENST00000487445 SBF2Q86WG5 1849 aa18.2■□□□□ 0.5
GCA-210ENST00000487445 RPS6KA4O75676 772 aa18.2■□□□□ 0.5
GCA-210ENST00000487445 GCKRQ14397 625 aa18.2■□□□□ 0.5
GCA-210ENST00000487445 GIGYF2Q6Y7W6 1299 aaKnown RBP18.2■□□□□ 0.5
GCA-210ENST00000487445 COL15A1P39059 1388 aa18.2■□□□□ 0.5
GCA-210ENST00000487445 CACNA1FO60840 1977 aa18.19■□□□□ 0.5
GCA-210ENST00000487445 PHF14O94880 888 aa18.19■□□□□ 0.5
GCA-210ENST00000487445 TCIRG1Q13488 830 aa18.19■□□□□ 0.5
GCA-210ENST00000487445 LRRFIP2Q9Y608 721 aaKnown RBP18.19■□□□□ 0.5
GCA-210ENST00000487445 A0A087WZG4 1122 aa18.19■□□□□ 0.5
GCA-210ENST00000487445 ERVV-1B6SEH8 477 aa18.19■□□□□ 0.5
GCA-210ENST00000487445 GRM8O00222 908 aa18.19■□□□□ 0.5
GCA-210ENST00000487445 JARID2Q92833 1246 aaPredicted RBP18.19■□□□□ 0.5
GCA-210ENST00000487445 GPTP24298 496 aa18.18■□□□□ 0.5
GCA-210ENST00000487445 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
GCA-210ENST00000487445 SF3B2Q13435 895 aaKnown RBP18.17■□□□□ 0.5
GCA-210ENST00000487445 HSP90AB3PQ58FF7 597 aa18.17■□□□□ 0.5
GCA-210ENST00000487445 RTL5Q5HYW3 569 aaPredicted RBP18.17■□□□□ 0.5
GCA-210ENST00000487445 CWC25Q9NXE8 425 aaPredicted RBP18.17■□□□□ 0.5
GCA-210ENST00000487445 CAMTA2O94983 1202 aa18.16■□□□□ 0.5
GCA-210ENST00000487445 CEP85Q6P2H3 762 aa18.16■□□□□ 0.5
GCA-210ENST00000487445 AMIGO3Q86WK7 504 aa18.16■□□□□ 0.5
GCA-210ENST00000487445 RPAP2Q8IXW5 612 aaPredicted RBP18.16■□□□□ 0.5
GCA-210ENST00000487445 CCDC191Q8NCU4 936 aa18.16■□□□□ 0.5
GCA-210ENST00000487445 KDM2BQ8NHM5 1336 aa18.16■□□□□ 0.5
GCA-210ENST00000487445 HDAC1Q13547 482 aaPredicted RBP18.16■□□□□ 0.5
GCA-210ENST00000487445 SIRT2Q8IXJ6 389 aa18.16■□□□□ 0.5
GCA-210ENST00000487445 ISCA1Q9BUE6 129 aa18.16■□□□□ 0.5
GCA-210ENST00000487445 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
GCA-210ENST00000487445 TRAPPC3LQ5T215 181 aa18.15■□□□□ 0.5
GCA-210ENST00000487445 UBE3BQ7Z3V4 1068 aa18.15■□□□□ 0.5
GCA-210ENST00000487445 ANKRD44Q8N8A2 993 aa18.15■□□□□ 0.5
GCA-210ENST00000487445 ARHGEF1Q92888 912 aaKnown RBP18.15■□□□□ 0.5
GCA-210ENST00000487445 HDAC5Q9UQL6 1122 aa18.14■□□□□ 0.5
GCA-210ENST00000487445 CICQ96RK0 1608 aaPredicted RBP18.14■□□□□ 0.49
GCA-210ENST00000487445 ZPR1O75312 459 aa18.14■□□□□ 0.49
GCA-210ENST00000487445 HMGB2P26583 209 aaKnown RBP18.14■□□□□ 0.49
GCA-210ENST00000487445 RFC4P35249 363 aa18.14■□□□□ 0.49
GCA-210ENST00000487445 USPL1Q5W0Q7 1092 aa18.14■□□□□ 0.49
GCA-210ENST00000487445 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
GCA-210ENST00000487445 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
GCA-210ENST00000487445 ZNF831Q5JPB2 1677 aa18.13■□□□□ 0.49
GCA-210ENST00000487445 UTYO14607 1347 aa18.13■□□□□ 0.49
GCA-210ENST00000487445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.13■□□□□ 0.49
GCA-210ENST00000487445 TRIM28Q13263 835 aaKnown RBP18.13■□□□□ 0.49
GCA-210ENST00000487445 EZH2Q15910 746 aaKnown RBP18.13■□□□□ 0.49
GCA-210ENST00000487445 SUCLG2Q96I99 432 aa18.13■□□□□ 0.49
GCA-210ENST00000487445 FAM177BA6PVY3 158 aa18.12■□□□□ 0.49
GCA-210ENST00000487445 NLRP10Q86W26 655 aa18.12■□□□□ 0.49
GCA-210ENST00000487445 NARFQ9UHQ1 456 aa18.12■□□□□ 0.49
GCA-210ENST00000487445 LY75O60449 1722 aa18.12■□□□□ 0.49
GCA-210ENST00000487445 H7C1W4 665 aa18.12■□□□□ 0.49
GCA-210ENST00000487445 HMMRO75330 724 aa18.12■□□□□ 0.49
GCA-210ENST00000487445 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
GCA-210ENST00000487445 TFCP2L1Q9NZI6 479 aa18.12■□□□□ 0.49
GCA-210ENST00000487445 NIP7Q9Y221 180 aaKnown RBP eCLIP18.12■□□□□ 0.49
GCA-210ENST00000487445 PNMA6EA0A0J9YXQ4 647 aa18.11■□□□□ 0.49
GCA-210ENST00000487445 BAG6P46379 1132 aa18.11■□□□□ 0.49
GCA-210ENST00000487445 BICDL1Q6ZP65 573 aa18.11■□□□□ 0.49
GCA-210ENST00000487445 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
GCA-210ENST00000487445 ZNF34Q8IZ26 560 aa18.11■□□□□ 0.49
GCA-210ENST00000487445 FAM89AQ96GI7 184 aa18.11■□□□□ 0.49
GCA-210ENST00000487445 COL5A3P25940 1745 aaPredicted RBP18.1■□□□□ 0.49
GCA-210ENST00000487445 MYH14Q7Z406 1995 aaKnown RBP18.1■□□□□ 0.49
GCA-210ENST00000487445 CLEC4GQ6UXB4 293 aa18.1■□□□□ 0.49
GCA-210ENST00000487445 PPP1R42Q7Z4L9 355 aa18.1■□□□□ 0.49
GCA-210ENST00000487445 KAZALD1Q96I82 304 aa18.1■□□□□ 0.49
GCA-210ENST00000487445 CAMKK2Q96RR4 588 aa18.1■□□□□ 0.49
GCA-210ENST00000487445 BICC1Q9H694 974 aaKnown RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms