RNA–Protein interactions for RNA: ENST00000487309.3

RN7SL397P-201, Transcript of RNA, 7SL, cytoplasmic 397, pseudogene, humanhuman

BASIC

Gene RN7SL397P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL397P-201ENST00000487309 SETDB2Q96T68 719 aa12.71□□□□□ -0.37
RN7SL397P-201ENST00000487309 TAF7Q15545 349 aaPredicted RBP12.7□□□□□ -0.38
RN7SL397P-201ENST00000487309 KDM2BQ8NHM5 1336 aa12.69□□□□□ -0.38
RN7SL397P-201ENST00000487309 HTATSF1O43719 755 aaKnown RBP12.69□□□□□ -0.38
RN7SL397P-201ENST00000487309 PDE6BP35913 854 aa12.69□□□□□ -0.38
RN7SL397P-201ENST00000487309 HLFQ16534 295 aa12.69□□□□□ -0.38
RN7SL397P-201ENST00000487309 NPM2Q86SE8 214 aaKnown RBP12.69□□□□□ -0.38
RN7SL397P-201ENST00000487309 DNAJC5GQ8N7S2 189 aa12.69□□□□□ -0.38
RN7SL397P-201ENST00000487309 RBM46Q8TBY0 533 aaKnown RBP12.69□□□□□ -0.38
RN7SL397P-201ENST00000487309 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
RN7SL397P-201ENST00000487309 NPHP1O15259 732 aa12.68□□□□□ -0.38
RN7SL397P-201ENST00000487309 SRGNP10124 158 aa12.68□□□□□ -0.38
RN7SL397P-201ENST00000487309 APLP1P51693 650 aa12.68□□□□□ -0.38
RN7SL397P-201ENST00000487309 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
RN7SL397P-201ENST00000487309 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
RN7SL397P-201ENST00000487309 ST5P78524 1137 aa12.67□□□□□ -0.38
RN7SL397P-201ENST00000487309 OLFM4Q6UX06 510 aa12.67□□□□□ -0.38
RN7SL397P-201ENST00000487309 NBPF5PQ86XG9 351 aaPredicted RBP12.67□□□□□ -0.38
RN7SL397P-201ENST00000487309 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
RN7SL397P-201ENST00000487309 NGEFQ8N5V2 710 aa12.67□□□□□ -0.38
RN7SL397P-201ENST00000487309 NIP7Q9Y221 180 aaKnown RBP eCLIP12.67□□□□□ -0.38
RN7SL397P-201ENST00000487309 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
RN7SL397P-201ENST00000487309 GLTPD2A6NH11 291 aa12.66□□□□□ -0.38
RN7SL397P-201ENST00000487309 EIF4A1P60842 406 aaKnown RBP12.66□□□□□ -0.38
RN7SL397P-201ENST00000487309 STYK1Q6J9G0 422 aa12.66□□□□□ -0.38
RN7SL397P-201ENST00000487309 CLEC4GQ6UXB4 293 aa12.66□□□□□ -0.38
RN7SL397P-201ENST00000487309 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
RN7SL397P-201ENST00000487309 ABCC12Q96J65 1359 aa12.66□□□□□ -0.38
RN7SL397P-201ENST00000487309 POTECB2RU33 542 aa12.65□□□□□ -0.38
RN7SL397P-201ENST00000487309 SLC51AQ86UW1 340 aa12.65□□□□□ -0.38
RN7SL397P-201ENST00000487309 MASTLQ96GX5 879 aa12.65□□□□□ -0.38
RN7SL397P-201ENST00000487309 ZNF652Q9Y2D9 606 aa12.65□□□□□ -0.38
RN7SL397P-201ENST00000487309 FSTL1Q12841 308 aa12.64□□□□□ -0.39
RN7SL397P-201ENST00000487309 ERFEQ4G0M1 354 aa12.64□□□□□ -0.39
RN7SL397P-201ENST00000487309 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
RN7SL397P-201ENST00000487309 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
RN7SL397P-201ENST00000487309 TAOK3Q9H2K8 898 aa12.64□□□□□ -0.39
RN7SL397P-201ENST00000487309 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
RN7SL397P-201ENST00000487309 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
RN7SL397P-201ENST00000487309 LTBP3Q9NS15 1303 aa12.63□□□□□ -0.39
RN7SL397P-201ENST00000487309 MAPK8IP3Q9UPT6 1336 aa12.63□□□□□ -0.39
RN7SL397P-201ENST00000487309 KLRG2A4D1S0 409 aaPredicted RBP12.63□□□□□ -0.39
RN7SL397P-201ENST00000487309 NEFMP07197 916 aa12.63□□□□□ -0.39
RN7SL397P-201ENST00000487309 MYL6BP14649 208 aa12.63□□□□□ -0.39
RN7SL397P-201ENST00000487309 GPTP24298 496 aa12.63□□□□□ -0.39
RN7SL397P-201ENST00000487309 NUTM1Q86Y26 1132 aa12.63□□□□□ -0.39
RN7SL397P-201ENST00000487309 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 TAF1P21675 1872 aa12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 LAMB2P55268 1798 aa12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 ANKRD36CQ5JPF3 1778 aa12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 VEGFAP15692 232 aaPredicted RBP12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 NPR1P16066 1061 aa12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 DDX10Q13206 875 aaKnown RBP12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
RN7SL397P-201ENST00000487309 SCN4AP35499 1836 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 DDNO94850 711 aaPredicted RBP12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 ANXA1P04083 346 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 POTEJP0CG39 1038 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 PROSER3Q2NL68 480 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 TPTE2Q6XPS3 522 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 LRP10Q7Z4F1 713 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 CCDC146Q8IYE0 955 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 PNISRQ8TF01 805 aaKnown RBP12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 ZNF277Q9NRM2 450 aaPredicted RBP12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 TSPYL4Q9UJ04 414 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 COL4A5P29400 1685 aa12.61□□□□□ -0.39
RN7SL397P-201ENST00000487309 RGL2O15211 777 aa12.6□□□□□ -0.39
RN7SL397P-201ENST00000487309 RIPK4P57078 832 aa12.6□□□□□ -0.39
RN7SL397P-201ENST00000487309 PDIA6Q15084 440 aa12.6□□□□□ -0.39
RN7SL397P-201ENST00000487309 RALBP1Q15311 655 aa12.6□□□□□ -0.39
RN7SL397P-201ENST00000487309 CCDC93Q567U6 631 aa12.6□□□□□ -0.39
RN7SL397P-201ENST00000487309 C3orf67Q6ZVT6 689 aa12.6□□□□□ -0.39
RN7SL397P-201ENST00000487309 KLRG1Q96E93 195 aa12.6□□□□□ -0.39
RN7SL397P-201ENST00000487309 ZNF541Q9H0D2 1346 aa12.6□□□□□ -0.39
RN7SL397P-201ENST00000487309 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
RN7SL397P-201ENST00000487309 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
RN7SL397P-201ENST00000487309 KRT24Q2M2I5 525 aa12.59□□□□□ -0.39
RN7SL397P-201ENST00000487309 IFFO2Q5TF58 517 aa12.59□□□□□ -0.39
RN7SL397P-201ENST00000487309 KIF6Q6ZMV9 814 aa12.59□□□□□ -0.39
RN7SL397P-201ENST00000487309 EIF2S2P20042 333 aaKnown RBP12.58□□□□□ -0.4
RN7SL397P-201ENST00000487309 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
RN7SL397P-201ENST00000487309 CRY2Q49AN0 593 aa12.58□□□□□ -0.4
RN7SL397P-201ENST00000487309 SUSD4Q5VX71 490 aa12.58□□□□□ -0.4
RN7SL397P-201ENST00000487309 NECTIN2Q92692 538 aa12.58□□□□□ -0.4
RN7SL397P-201ENST00000487309 NTSR2O95665 410 aa12.57□□□□□ -0.4
RN7SL397P-201ENST00000487309 FKBP4Q02790 459 aaKnown RBP eCLIP12.57□□□□□ -0.4
RN7SL397P-201ENST00000487309 NEUROD2Q15784 382 aa12.57□□□□□ -0.4
RN7SL397P-201ENST00000487309 SOGA3Q5TF21 947 aa12.57□□□□□ -0.4
RN7SL397P-201ENST00000487309 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
RN7SL397P-201ENST00000487309 ZNF34Q8IZ26 560 aa12.57□□□□□ -0.4
RN7SL397P-201ENST00000487309 PNNQ9H307 717 aaKnown RBP12.57□□□□□ -0.4
RN7SL397P-201ENST00000487309 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
RN7SL397P-201ENST00000487309 RIC1Q4ADV7 1423 aa12.56□□□□□ -0.4
RN7SL397P-201ENST00000487309 GIGYF2Q6Y7W6 1299 aaKnown RBP12.56□□□□□ -0.4
RN7SL397P-201ENST00000487309 ZNF428Q96B54 188 aa12.56□□□□□ -0.4
RN7SL397P-201ENST00000487309 NYXQ9GZU5 481 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms