RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 CNBD1Q8NA66 436 aa29.5■■■□□ 2.31
SRM-205ENST00000487300 ANKRD36CQ5JPF3 1778 aa29.49■■■□□ 2.31
SRM-205ENST00000487300 PDE6BP35913 854 aa29.49■■■□□ 2.31
SRM-205ENST00000487300 TTLL6Q8N841 843 aa29.49■■■□□ 2.31
SRM-205ENST00000487300 ERBB4Q15303 1308 aa29.48■■■□□ 2.31
SRM-205ENST00000487300 ZNF526Q8TF50 670 aaPredicted RBP29.48■■■□□ 2.31
SRM-205ENST00000487300 RUNDC1Q96C34 613 aa29.48■■■□□ 2.31
SRM-205ENST00000487300 C9orf131Q5VYM1 1079 aa29.47■■■□□ 2.31
SRM-205ENST00000487300 CCDC146Q8IYE0 955 aa29.47■■■□□ 2.31
SRM-205ENST00000487300 TSPYL4Q9UJ04 414 aa29.47■■■□□ 2.31
SRM-205ENST00000487300 WDR43Q15061 677 aaKnown RBP eCLIP29.46■■■□□ 2.31
SRM-205ENST00000487300 ADAMTS8Q9UP79 889 aa29.46■■■□□ 2.31
SRM-205ENST00000487300 CCDC24Q8N4L8 307 aa29.45■■■□□ 2.31
SRM-205ENST00000487300 TRIM35Q9UPQ4 493 aa29.45■■■□□ 2.31
SRM-205ENST00000487300 KIF3CO14782 793 aa29.44■■■□□ 2.3
SRM-205ENST00000487300 ST5P78524 1137 aa29.44■■■□□ 2.3
SRM-205ENST00000487300 HLFQ16534 295 aa29.44■■■□□ 2.3
SRM-205ENST00000487300 ERVV-1B6SEH8 477 aa29.43■■■□□ 2.3
SRM-205ENST00000487300 ZEB1P37275 1124 aaPredicted RBP29.43■■■□□ 2.3
SRM-205ENST00000487300 LRP10Q7Z4F1 713 aa29.43■■■□□ 2.3
SRM-205ENST00000487300 RRP7AQ9Y3A4 280 aaKnown RBP29.43■■■□□ 2.3
SRM-205ENST00000487300 SRGNP10124 158 aa29.42■■■□□ 2.3
SRM-205ENST00000487300 NIP7Q9Y221 180 aaKnown RBP eCLIP29.42■■■□□ 2.3
SRM-205ENST00000487300 MAP3K15Q6ZN16 1313 aa29.42■■■□□ 2.3
SRM-205ENST00000487300 KLRG2A4D1S0 409 aaPredicted RBP29.41■■■□□ 2.3
SRM-205ENST00000487300 NBPF5PQ86XG9 351 aaPredicted RBP29.41■■■□□ 2.3
SRM-205ENST00000487300 RNF181Q9P0P0 153 aa29.41■■■□□ 2.3
SRM-205ENST00000487300 ZC3H4Q9UPT8 1303 aaKnown RBP29.41■■■□□ 2.3
SRM-205ENST00000487300 NFKBIEO00221 500 aa29.4■■■□□ 2.3
SRM-205ENST00000487300 PRELPP51888 382 aa29.4■■■□□ 2.3
SRM-205ENST00000487300 RASSF7Q02833 373 aa29.4■■■□□ 2.3
SRM-205ENST00000487300 STYK1Q6J9G0 422 aa29.4■■■□□ 2.3
SRM-205ENST00000487300 IBTKQ9P2D0 1353 aaPredicted RBP29.39■■■□□ 2.3
SRM-205ENST00000487300 RIC1Q4ADV7 1423 aa29.39■■■□□ 2.3
SRM-205ENST00000487300 CHL1O00533 1208 aa29.39■■■□□ 2.3
SRM-205ENST00000487300 PDIA6Q15084 440 aa29.39■■■□□ 2.3
SRM-205ENST00000487300 TTLL7Q6ZT98 887 aa29.39■■■□□ 2.3
SRM-205ENST00000487300 SENP3-EIF4A1A0A087X0R7 540 aa29.37■■■□□ 2.29
SRM-205ENST00000487300 MYL6BP14649 208 aa29.37■■■□□ 2.29
SRM-205ENST00000487300 TPTE2Q6XPS3 522 aa29.37■■■□□ 2.29
SRM-205ENST00000487300 ZNF622Q969S3 477 aaKnown RBP eCLIP29.37■■■□□ 2.29
SRM-205ENST00000487300 NPHP1O15259 732 aa29.36■■■□□ 2.29
SRM-205ENST00000487300 LMNB1P20700 586 aa29.36■■■□□ 2.29
SRM-205ENST00000487300 NEUROD2Q15784 382 aa29.36■■■□□ 2.29
SRM-205ENST00000487300 MASTLQ96GX5 879 aa29.36■■■□□ 2.29
SRM-205ENST00000487300 KIF6Q6ZMV9 814 aa29.35■■■□□ 2.29
SRM-205ENST00000487300 CNKSR1Q969H4 720 aa29.35■■■□□ 2.29
SRM-205ENST00000487300 LAMB2P55268 1798 aa29.34■■■□□ 2.29
SRM-205ENST00000487300 NGEFQ8N5V2 710 aa29.34■■■□□ 2.29
SRM-205ENST00000487300 NMRK2Q9NPI5 230 aa29.34■■■□□ 2.29
SRM-205ENST00000487300 UBN2Q6ZU65 1347 aa29.34■■■□□ 2.29
SRM-205ENST00000487300 LTBP3Q9NS15 1303 aa29.34■■■□□ 2.29
SRM-205ENST00000487300 ABCC12Q96J65 1359 aa29.34■■■□□ 2.29
SRM-205ENST00000487300 PRPF40BQ6NWY9 871 aaKnown RBP29.33■■■□□ 2.29
SRM-205ENST00000487300 C21orf2O43822 256 aa29.32■■■□□ 2.28
SRM-205ENST00000487300 GIGYF2Q6Y7W6 1299 aaKnown RBP29.32■■■□□ 2.28
SRM-205ENST00000487300 PROSER3Q2NL68 480 aa29.31■■■□□ 2.28
SRM-205ENST00000487300 ZBTB3Q9H5J0 574 aa29.31■■■□□ 2.28
SRM-205ENST00000487300 WDR90Q96KV7 1748 aa29.31■■■□□ 2.28
SRM-205ENST00000487300 KDM2BQ8NHM5 1336 aa29.3■■■□□ 2.28
SRM-205ENST00000487300 NPR1P16066 1061 aa29.3■■■□□ 2.28
SRM-205ENST00000487300 ZNF34Q8IZ26 560 aa29.3■■■□□ 2.28
SRM-205ENST00000487300 C7orf43Q8WVR3 580 aa29.3■■■□□ 2.28
SRM-205ENST00000487300 NYXQ9GZU5 481 aa29.3■■■□□ 2.28
SRM-205ENST00000487300 KRT24Q2M2I5 525 aa29.29■■■□□ 2.28
SRM-205ENST00000487300 CRY2Q49AN0 593 aa29.29■■■□□ 2.28
SRM-205ENST00000487300 SNED1Q8TER0 1413 aa29.28■■■□□ 2.28
SRM-205ENST00000487300 HOXB7P09629 217 aa29.28■■■□□ 2.28
SRM-205ENST00000487300 EIF2S2P20042 333 aaKnown RBP29.28■■■□□ 2.28
SRM-205ENST00000487300 CFAP44Q96MT7 982 aa29.28■■■□□ 2.28
SRM-205ENST00000487300 FAM177BA6PVY3 158 aa29.27■■■□□ 2.28
SRM-205ENST00000487300 TOMM70O94826 608 aa29.27■■■□□ 2.28
SRM-205ENST00000487300 SOGA3Q5TF21 947 aa29.27■■■□□ 2.28
SRM-205ENST00000487300 ANXA1P04083 346 aa29.26■■■□□ 2.27
SRM-205ENST00000487300 ZNF853P0CG23 659 aa29.26■■■□□ 2.27
SRM-205ENST00000487300 APAF1O14727 1248 aa29.25■■■□□ 2.27
SRM-205ENST00000487300 NTSR2O95665 410 aa29.25■■■□□ 2.27
SRM-205ENST00000487300 GPTP24298 496 aa29.25■■■□□ 2.27
SRM-205ENST00000487300 DDX21Q9NR30 783 aaKnown RBP eCLIP29.25■■■□□ 2.27
SRM-205ENST00000487300 HSPA6P17066 643 aa29.24■■■□□ 2.27
SRM-205ENST00000487300 CCDC184Q52MB2 194 aa29.24■■■□□ 2.27
SRM-205ENST00000487300 SUSD4Q5VX71 490 aa29.24■■■□□ 2.27
SRM-205ENST00000487300 NUTM1Q86Y26 1132 aa29.24■■■□□ 2.27
SRM-205ENST00000487300 TAOK3Q9H2K8 898 aa29.24■■■□□ 2.27
SRM-205ENST00000487300 ZNF219Q9P2Y4 722 aaPredicted RBP29.24■■■□□ 2.27
SRM-205ENST00000487300 DDX60Q8IY21 1712 aaKnown RBP29.23■■■□□ 2.27
SRM-205ENST00000487300 ERFEQ4G0M1 354 aa29.23■■■□□ 2.27
SRM-205ENST00000487300 GLTPD2A6NH11 291 aa29.22■■■□□ 2.27
SRM-205ENST00000487300 PARP10Q53GL7 1025 aa29.22■■■□□ 2.27
SRM-205ENST00000487300 MBIPQ9NS73 344 aa29.22■■■□□ 2.27
SRM-205ENST00000487300 LAS1LQ9Y4W2 734 aaKnown RBP29.22■■■□□ 2.27
SRM-205ENST00000487300 GTF2E1P29083 439 aaPredicted RBP29.21■■■□□ 2.27
SRM-205ENST00000487300 CCDC93Q567U6 631 aa29.2■■■□□ 2.26
SRM-205ENST00000487300 COPS6Q7L5N1 327 aa29.2■■■□□ 2.26
SRM-205ENST00000487300 XAGE3Q8WTP9 111 aa29.2■■■□□ 2.26
SRM-205ENST00000487300 NECTIN2Q92692 538 aa29.2■■■□□ 2.26
SRM-205ENST00000487300 IFT57Q9NWB7 429 aa29.2■■■□□ 2.26
SRM-205ENST00000487300 RNF123Q5XPI4 1314 aa29.2■■■□□ 2.26
SRM-205ENST00000487300 ZNF316A6NFI3 1004 aaPredicted RBP29.19■■■□□ 2.26
SRM-205ENST00000487300 HOXA10P31260 410 aaPredicted RBP29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms