RNA–Protein interactions for RNA: ENST00000487002.1

FDPS-212, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 2,017 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-212ENST00000487002 NFATC2IPQ8NCF5 419 aa20.6■□□□□ 0.89
FDPS-212ENST00000487002 GZF1Q9H116 711 aaPredicted RBP20.6■□□□□ 0.89
FDPS-212ENST00000487002 ARFGEF2Q9Y6D5 1785 aa20.59■□□□□ 0.89
FDPS-212ENST00000487002 AFDNP55196 1824 aaKnown RBP20.59■□□□□ 0.89
FDPS-212ENST00000487002 SLC39A6Q13433 755 aa20.59■□□□□ 0.89
FDPS-212ENST00000487002 PALD1Q9ULE6 856 aa20.59■□□□□ 0.89
FDPS-212ENST00000487002 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
FDPS-212ENST00000487002 RIC3Q7Z5B4 369 aa20.58■□□□□ 0.89
FDPS-212ENST00000487002 TTC5Q8N0Z6 440 aa20.58■□□□□ 0.89
FDPS-212ENST00000487002 ECHDC1Q9NTX5 307 aa20.58■□□□□ 0.89
FDPS-212ENST00000487002 CYP27B1O15528 508 aa20.58■□□□□ 0.88
FDPS-212ENST00000487002 CUL4AQ13619 759 aa20.58■□□□□ 0.88
FDPS-212ENST00000487002 CABLES1Q8TDN4 633 aa20.58■□□□□ 0.88
FDPS-212ENST00000487002 SUCLG2Q96I99 432 aa20.58■□□□□ 0.88
FDPS-212ENST00000487002 IGKV5-2P06315 115 aa20.57■□□□□ 0.88
FDPS-212ENST00000487002 INTS4Q96HW7 963 aaKnown RBP20.57■□□□□ 0.88
FDPS-212ENST00000487002 KAZALD1Q96I82 304 aa20.57■□□□□ 0.88
FDPS-212ENST00000487002 ZNF496Q96IT1 587 aaPredicted RBP20.57■□□□□ 0.88
FDPS-212ENST00000487002 TMX3Q96JJ7 454 aa20.57■□□□□ 0.88
FDPS-212ENST00000487002 FMNL2Q96PY5 1086 aa20.57■□□□□ 0.88
FDPS-212ENST00000487002 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
FDPS-212ENST00000487002 COL15A1P39059 1388 aa20.57■□□□□ 0.88
FDPS-212ENST00000487002 ABCA3Q99758 1704 aa20.57■□□□□ 0.88
FDPS-212ENST00000487002 MRE11P49959 708 aa20.56■□□□□ 0.88
FDPS-212ENST00000487002 METTL22Q9BUU2 404 aaPredicted RBP20.56■□□□□ 0.88
FDPS-212ENST00000487002 NEURL1BA8MQ27 555 aa20.56■□□□□ 0.88
FDPS-212ENST00000487002 AIMP1Q12904 312 aaKnown RBP20.56■□□□□ 0.88
FDPS-212ENST00000487002 CHRNA2Q15822 529 aa20.56■□□□□ 0.88
FDPS-212ENST00000487002 BICC1Q9H694 974 aaKnown RBP20.56■□□□□ 0.88
FDPS-212ENST00000487002 IFIT2P09913 472 aaKnown RBP20.55■□□□□ 0.88
FDPS-212ENST00000487002 PAPPAQ13219 1627 aa20.55■□□□□ 0.88
FDPS-212ENST00000487002 KLHL40Q2TBA0 621 aa20.55■□□□□ 0.88
FDPS-212ENST00000487002 LRP10Q7Z4F1 713 aa20.55■□□□□ 0.88
FDPS-212ENST00000487002 ZGPATQ8N5A5 531 aaKnown RBP20.55■□□□□ 0.88
FDPS-212ENST00000487002 XAGE3Q8WTP9 111 aa20.55■□□□□ 0.88
FDPS-212ENST00000487002 IL25Q9H293 177 aa20.55■□□□□ 0.88
FDPS-212ENST00000487002 RUFY2Q8WXA3 655 aa20.54■□□□□ 0.88
FDPS-212ENST00000487002 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
FDPS-212ENST00000487002 XRCC6P12956 609 aaKnown RBP eCLIP20.54■□□□□ 0.88
FDPS-212ENST00000487002 GCKRQ14397 625 aa20.54■□□□□ 0.88
FDPS-212ENST00000487002 LSG1Q9H089 658 aaKnown RBP20.54■□□□□ 0.88
FDPS-212ENST00000487002 MAP4K4O95819 1239 aaPredicted RBP20.53■□□□□ 0.88
FDPS-212ENST00000487002 G3BP1Q13283 466 aaKnown RBP eCLIP20.53■□□□□ 0.882e-7■■■□□ 16.5
FDPS-212ENST00000487002 BRINP3Q76B58 766 aa20.53■□□□□ 0.88
FDPS-212ENST00000487002 COPS6Q7L5N1 327 aa20.53■□□□□ 0.88
FDPS-212ENST00000487002 PA2G4Q9UQ80 394 aaKnown RBP20.53■□□□□ 0.88
FDPS-212ENST00000487002 WDR17Q8IZU2 1322 aa20.53■□□□□ 0.88
FDPS-212ENST00000487002 MYL6BP14649 208 aa20.53■□□□□ 0.88
FDPS-212ENST00000487002 KIAA1211Q6ZU35 1233 aa20.53■□□□□ 0.88
FDPS-212ENST00000487002 PCDH11XQ9BZA7 1347 aa20.52■□□□□ 0.88
FDPS-212ENST00000487002 PCDH11YQ9BZA8 1340 aa20.52■□□□□ 0.88
FDPS-212ENST00000487002 CABP4P57796 275 aa20.52■□□□□ 0.88
FDPS-212ENST00000487002 ANKRD13DQ6ZTN6 518 aa20.52■□□□□ 0.88
FDPS-212ENST00000487002 EVI5LQ96CN4 794 aa20.52■□□□□ 0.88
FDPS-212ENST00000487002 DIAPH3Q9NSV4 1193 aa20.52■□□□□ 0.88
FDPS-212ENST00000487002 STRCQ7RTU9 1775 aa20.52■□□□□ 0.88
FDPS-212ENST00000487002 AACSQ86V21 672 aa20.51■□□□□ 0.87
FDPS-212ENST00000487002 SOS2Q07890 1332 aaPredicted RBP20.51■□□□□ 0.87
FDPS-212ENST00000487002 COL5A2P05997 1499 aaPredicted RBP20.51■□□□□ 0.87
FDPS-212ENST00000487002 SASH1O94885 1247 aa20.51■□□□□ 0.87
FDPS-212ENST00000487002 MYD88Q99836 296 aa20.51■□□□□ 0.87
FDPS-212ENST00000487002 SHANK3Q9BYB0 1731 aa20.5■□□□□ 0.87
FDPS-212ENST00000487002 HIP1O00291 1037 aa20.5■□□□□ 0.87
FDPS-212ENST00000487002 PKP1Q13835 747 aa20.5■□□□□ 0.87
FDPS-212ENST00000487002 ZDHHC9Q9Y397 364 aa20.5■□□□□ 0.87
FDPS-212ENST00000487002 NUP188Q5SRE5 1749 aa20.5■□□□□ 0.87
FDPS-212ENST00000487002 GRPEL1Q9HAV7 217 aa20.49■□□□□ 0.87
FDPS-212ENST00000487002 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
FDPS-212ENST00000487002 SNX14Q9Y5W7 946 aa20.49■□□□□ 0.87
FDPS-212ENST00000487002 DDX49Q9Y6V7 483 aaKnown RBP20.49■□□□□ 0.87
FDPS-212ENST00000487002 MCTP1Q6DN14 999 aa20.48■□□□□ 0.87
FDPS-212ENST00000487002 CWC27Q6UX04 472 aaKnown RBP20.48■□□□□ 0.87
FDPS-212ENST00000487002 HSPA2P54652 639 aa20.48■□□□□ 0.87
FDPS-212ENST00000487002 UPF3BQ9BZI7 483 aaKnown RBP20.48■□□□□ 0.87
FDPS-212ENST00000487002 COPRSQ9NQ92 184 aa20.48■□□□□ 0.87
FDPS-212ENST00000487002 PRDM11Q9NQV5 511 aa20.48■□□□□ 0.87
FDPS-212ENST00000487002 LMBRD1Q9NUN5 540 aa20.48■□□□□ 0.87
FDPS-212ENST00000487002 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
FDPS-212ENST00000487002 BRD1O95696 1058 aa20.47■□□□□ 0.87
FDPS-212ENST00000487002 RABL6Q3YEC7 729 aaPredicted RBP20.47■□□□□ 0.87
FDPS-212ENST00000487002 FAM43AQ8N2R8 423 aa20.47■□□□□ 0.87
FDPS-212ENST00000487002 EAF2Q96CJ1 260 aaPredicted RBP20.47■□□□□ 0.87
FDPS-212ENST00000487002 KCPQ6ZWJ8 1503 aa20.47■□□□□ 0.87
FDPS-212ENST00000487002 PLBD2Q8NHP8 589 aa20.46■□□□□ 0.87
FDPS-212ENST00000487002 KCNB2Q92953 911 aa20.46■□□□□ 0.87
FDPS-212ENST00000487002 SNRKQ9NRH2 765 aa20.46■□□□□ 0.87
FDPS-212ENST00000487002 NHSL1Q5SYE7 1610 aa20.46■□□□□ 0.87
FDPS-212ENST00000487002 ZCRB1Q8TBF4 217 aaKnown RBP20.46■□□□□ 0.87
FDPS-212ENST00000487002 TTC14Q96N46 770 aa20.46■□□□□ 0.87
FDPS-212ENST00000487002 NKX1-1Q15270 411 aaPredicted RBP20.45■□□□□ 0.86
FDPS-212ENST00000487002 TJP1Q07157 1748 aa20.44■□□□□ 0.86
FDPS-212ENST00000487002 EPHA10Q5JZY3 1008 aa20.44■□□□□ 0.86
FDPS-212ENST00000487002 TOM1L2Q6ZVM7 507 aa20.44■□□□□ 0.86
FDPS-212ENST00000487002 TM6SF1Q9BZW5 370 aa20.44■□□□□ 0.86
FDPS-212ENST00000487002 TNS2Q63HR2 1409 aa20.43■□□□□ 0.86
FDPS-212ENST00000487002 RFX5P48382 616 aaPredicted RBP20.43■□□□□ 0.86
FDPS-212ENST00000487002 RFX7Q2KHR2 1363 aa20.43■□□□□ 0.86
FDPS-212ENST00000487002 CARD10Q9BWT7 1032 aa20.43■□□□□ 0.86
FDPS-212ENST00000487002 CCDC171Q6TFL3 1326 aa20.42■□□□□ 0.86
FDPS-212ENST00000487002 ZNF445P59923 1031 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms