RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
NR1H3-223ENST00000486991 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
NR1H3-223ENST00000486991 H0YIN7 160 aa17.1■□□□□ 0.33
NR1H3-223ENST00000486991 NFKBIEO00221 500 aa17.1■□□□□ 0.33
NR1H3-223ENST00000486991 PIP4K2AP48426 406 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-223ENST00000486991 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
NR1H3-223ENST00000486991 NEUROD2Q15784 382 aa17.1■□□□□ 0.33
NR1H3-223ENST00000486991 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.33
NR1H3-223ENST00000486991 SALL2Q9Y467 1007 aaPredicted RBP17.1■□□□□ 0.33
NR1H3-223ENST00000486991 LMNB1P20700 586 aa17.09■□□□□ 0.33
NR1H3-223ENST00000486991 TMPOP42166 694 aaKnown RBP17.09■□□□□ 0.33
NR1H3-223ENST00000486991 FSTL1Q12841 308 aa17.09■□□□□ 0.33
NR1H3-223ENST00000486991 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-223ENST00000486991 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
NR1H3-223ENST00000486991 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.32
NR1H3-223ENST00000486991 PRR5LQ6MZQ0 368 aa17.08■□□□□ 0.32
NR1H3-223ENST00000486991 MIS18AQ9NYP9 233 aa17.08■□□□□ 0.32
NR1H3-223ENST00000486991 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
NR1H3-223ENST00000486991 A0A087WZG4 1122 aa17.07■□□□□ 0.32
NR1H3-223ENST00000486991 GLTPD2A6NH11 291 aa17.07■□□□□ 0.32
NR1H3-223ENST00000486991 C21orf2O43822 256 aa17.07■□□□□ 0.32
NR1H3-223ENST00000486991 RIPK4P57078 832 aa17.07■□□□□ 0.32
NR1H3-223ENST00000486991 KLRG1Q96E93 195 aa17.07■□□□□ 0.32
NR1H3-223ENST00000486991 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
NR1H3-223ENST00000486991 TIAM2Q8IVF5 1701 aa17.07■□□□□ 0.32
NR1H3-223ENST00000486991 PCNTO95613 3336 aa17.06■□□□□ 0.32
NR1H3-223ENST00000486991 POTECB2RU33 542 aa17.05■□□□□ 0.32
NR1H3-223ENST00000486991 CAMTA2O94983 1202 aa17.05■□□□□ 0.32
NR1H3-223ENST00000486991 IL6STP40189 918 aaPredicted RBP17.05■□□□□ 0.32
NR1H3-223ENST00000486991 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
NR1H3-223ENST00000486991 SMC1BQ8NDV3 1235 aa17.05■□□□□ 0.32
NR1H3-223ENST00000486991 BRIP1Q9BX63 1249 aa17.05■□□□□ 0.32
NR1H3-223ENST00000486991 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
NR1H3-223ENST00000486991 SNRPA1P09661 255 aaKnown RBP17.04■□□□□ 0.32
NR1H3-223ENST00000486991 VEGFAP15692 232 aaPredicted RBP17.04■□□□□ 0.32
NR1H3-223ENST00000486991 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
NR1H3-223ENST00000486991 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
NR1H3-223ENST00000486991 NUP98P52948 1817 aa17.03■□□□□ 0.32
NR1H3-223ENST00000486991 PDE6BP35913 854 aa17.03■□□□□ 0.32
NR1H3-223ENST00000486991 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
NR1H3-223ENST00000486991 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
NR1H3-223ENST00000486991 SETDB2Q96T68 719 aa17.03■□□□□ 0.32
NR1H3-223ENST00000486991 CACNA1SQ13698 1873 aa17.03■□□□□ 0.32
NR1H3-223ENST00000486991 COL13A1Q5TAT6 717 aaPredicted RBP17.02■□□□□ 0.32
NR1H3-223ENST00000486991 DZIP3Q86Y13 1208 aaKnown RBP17.02■□□□□ 0.32
NR1H3-223ENST00000486991 NGEFQ8N5V2 710 aa17.02■□□□□ 0.32
NR1H3-223ENST00000486991 JMYQ8N9B5 988 aa17.02■□□□□ 0.32
NR1H3-223ENST00000486991 TRIM35Q9UPQ4 493 aa17.02■□□□□ 0.32
NR1H3-223ENST00000486991 SLX4Q8IY92 1834 aa17.02■□□□□ 0.31
NR1H3-223ENST00000486991 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
NR1H3-223ENST00000486991 CNBD1Q8NA66 436 aa17.01■□□□□ 0.31
NR1H3-223ENST00000486991 NPHP1O15259 732 aa17■□□□□ 0.31
NR1H3-223ENST00000486991 FER1L6Q2WGJ9 1857 aa17■□□□□ 0.31
NR1H3-223ENST00000486991 ERFEQ4G0M1 354 aa17■□□□□ 0.31
NR1H3-223ENST00000486991 SRGNP10124 158 aa16.99■□□□□ 0.31
NR1H3-223ENST00000486991 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
NR1H3-223ENST00000486991 NCBP3Q53F19 620 aaKnown RBP16.99■□□□□ 0.31
NR1H3-223ENST00000486991 PRPF40BQ6NWY9 871 aaKnown RBP16.99■□□□□ 0.31
NR1H3-223ENST00000486991 WWC1Q8IX03 1113 aa16.99■□□□□ 0.31
NR1H3-223ENST00000486991 FAM177BA6PVY3 158 aa16.98■□□□□ 0.31
NR1H3-223ENST00000486991 DDNO94850 711 aaPredicted RBP16.98■□□□□ 0.31
NR1H3-223ENST00000486991 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
NR1H3-223ENST00000486991 POTEJP0CG39 1038 aa16.98■□□□□ 0.31
NR1H3-223ENST00000486991 OLFM4Q6UX06 510 aa16.98■□□□□ 0.31
NR1H3-223ENST00000486991 ZBED9Q6R2W3 1325 aa16.97■□□□□ 0.31
NR1H3-223ENST00000486991 ST5P78524 1137 aa16.97■□□□□ 0.31
NR1H3-223ENST00000486991 STYK1Q6J9G0 422 aa16.97■□□□□ 0.31
NR1H3-223ENST00000486991 DPY19L2Q6NUT2 758 aa16.97■□□□□ 0.31
NR1H3-223ENST00000486991 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
NR1H3-223ENST00000486991 DICER1Q9UPY3 1922 aaKnown RBP16.97■□□□□ 0.31
NR1H3-223ENST00000486991 NBPF5PQ86XG9 351 aaPredicted RBP16.96■□□□□ 0.31
NR1H3-223ENST00000486991 CNKSR1Q969H4 720 aa16.96■□□□□ 0.31
NR1H3-223ENST00000486991 TAOK3Q9H2K8 898 aa16.96■□□□□ 0.31
NR1H3-223ENST00000486991 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
NR1H3-223ENST00000486991 PDZRN3Q9UPQ7 1066 aa16.96■□□□□ 0.31
NR1H3-223ENST00000486991 ARFGEF2Q9Y6D5 1785 aa16.96■□□□□ 0.31
NR1H3-223ENST00000486991 CHL1O00533 1208 aa16.95■□□□□ 0.3
NR1H3-223ENST00000486991 HLFQ16534 295 aa16.95■□□□□ 0.3
NR1H3-223ENST00000486991 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
NR1H3-223ENST00000486991 MASTLQ96GX5 879 aa16.95■□□□□ 0.3
NR1H3-223ENST00000486991 ANKRD36CQ5JPF3 1778 aa16.94■□□□□ 0.3
NR1H3-223ENST00000486991 CAPN15O75808 1086 aa16.94■□□□□ 0.3
NR1H3-223ENST00000486991 CALD1Q05682 793 aaKnown RBP16.94■□□□□ 0.3
NR1H3-223ENST00000486991 WDR63Q8IWG1 891 aa16.94■□□□□ 0.3
NR1H3-223ENST00000486991 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
NR1H3-223ENST00000486991 ZNF521Q96K83 1311 aa16.94■□□□□ 0.3
NR1H3-223ENST00000486991 LTBP3Q9NS15 1303 aa16.94■□□□□ 0.3
NR1H3-223ENST00000486991 RGL2O15211 777 aa16.93■□□□□ 0.3
NR1H3-223ENST00000486991 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
NR1H3-223ENST00000486991 NIP7Q9Y221 180 aaKnown RBP eCLIP16.93■□□□□ 0.3
NR1H3-223ENST00000486991 LAS1LQ9Y4W2 734 aaKnown RBP16.93■□□□□ 0.3
NR1H3-223ENST00000486991 HSPA1AP0DMV8 641 aaKnown RBP16.92■□□□□ 0.3
NR1H3-223ENST00000486991 HSPA1BP0DMV9 641 aaKnown RBP16.92■□□□□ 0.3
NR1H3-223ENST00000486991 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
NR1H3-223ENST00000486991 PDIA6Q15084 440 aa16.92■□□□□ 0.3
NR1H3-223ENST00000486991 CLEC4GQ6UXB4 293 aa16.92■□□□□ 0.3
NR1H3-223ENST00000486991 ZNF277Q9NRM2 450 aaPredicted RBP16.92■□□□□ 0.3
NR1H3-223ENST00000486991 ZNF853P0CG23 659 aa16.91■□□□□ 0.3
NR1H3-223ENST00000486991 PROSER3Q2NL68 480 aa16.91■□□□□ 0.3
NR1H3-223ENST00000486991 CHADLQ6NUI6 762 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms