RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 SBF1O95248 1867 aa25■■□□□ 1.59
GMDS-205ENST00000486793 NBPF26B4DH59 902 aa25■■□□□ 1.59
GMDS-205ENST00000486793 PRPF40BQ6NWY9 871 aaKnown RBP25■■□□□ 1.59
GMDS-205ENST00000486793 NBPF10Q6P3W6 841 aaKnown RBP25■■□□□ 1.59
GMDS-205ENST00000486793 NBPF5PQ86XG9 351 aaPredicted RBP25■■□□□ 1.59
GMDS-205ENST00000486793 NBPF15Q8N660 670 aa25■■□□□ 1.59
GMDS-205ENST00000486793 TAF7Q15545 349 aaPredicted RBP24.99■■□□□ 1.59
GMDS-205ENST00000486793 VIRMAQ69YN4 1812 aaKnown RBP24.99■■□□□ 1.59
GMDS-205ENST00000486793 TAOK3Q9H2K8 898 aa24.99■■□□□ 1.59
GMDS-205ENST00000486793 ZNF652Q9Y2D9 606 aa24.99■■□□□ 1.59
GMDS-205ENST00000486793 MIS18AQ9NYP9 233 aa24.98■■□□□ 1.59
GMDS-205ENST00000486793 LTBP3Q9NS15 1303 aa24.97■■□□□ 1.59
GMDS-205ENST00000486793 SIPA1L3O60292 1781 aaPredicted RBP24.96■■□□□ 1.59
GMDS-205ENST00000486793 TPTE2Q6XPS3 522 aa24.96■■□□□ 1.59
GMDS-205ENST00000486793 C7orf43Q8WVR3 580 aa24.96■■□□□ 1.59
GMDS-205ENST00000486793 NIP7Q9Y221 180 aaKnown RBP eCLIP24.96■■□□□ 1.59
GMDS-205ENST00000486793 SOGA3Q5TF21 947 aa24.95■■□□□ 1.58
GMDS-205ENST00000486793 DLEC1Q9Y238 1755 aa24.95■■□□□ 1.58
GMDS-205ENST00000486793 TNRC6CQ9HCJ0 1690 aaKnown RBP24.94■■□□□ 1.58
GMDS-205ENST00000486793 KLRG2A4D1S0 409 aaPredicted RBP24.94■■□□□ 1.58
GMDS-205ENST00000486793 FAM177BA6PVY3 158 aa24.94■■□□□ 1.58
GMDS-205ENST00000486793 DDNO94850 711 aaPredicted RBP24.94■■□□□ 1.58
GMDS-205ENST00000486793 WDR90Q96KV7 1748 aa24.94■■□□□ 1.58
GMDS-205ENST00000486793 SCN7AQ01118 1682 aa24.94■■□□□ 1.58
GMDS-205ENST00000486793 NPR1P16066 1061 aa24.93■■□□□ 1.58
GMDS-205ENST00000486793 HLFQ16534 295 aa24.93■■□□□ 1.58
GMDS-205ENST00000486793 PCNTO95613 3336 aa24.92■■□□□ 1.58
GMDS-205ENST00000486793 RGL2O15211 777 aa24.92■■□□□ 1.58
GMDS-205ENST00000486793 ANKRD31Q8N7Z5 1873 aa24.92■■□□□ 1.58
GMDS-205ENST00000486793 COL13A1Q5TAT6 717 aaPredicted RBP24.91■■□□□ 1.58
GMDS-205ENST00000486793 CCDC93Q567U6 631 aa24.9■■□□□ 1.58
GMDS-205ENST00000486793 OLFM4Q6UX06 510 aa24.89■■□□□ 1.58
GMDS-205ENST00000486793 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
GMDS-205ENST00000486793 NEFMP07197 916 aa24.88■■□□□ 1.57
GMDS-205ENST00000486793 POTEIP0CG38 1075 aa24.88■■□□□ 1.57
GMDS-205ENST00000486793 POTEJP0CG39 1038 aa24.88■■□□□ 1.57
GMDS-205ENST00000486793 GTF2E1P29083 439 aaPredicted RBP24.88■■□□□ 1.57
GMDS-205ENST00000486793 CHADLQ6NUI6 762 aa24.88■■□□□ 1.57
GMDS-205ENST00000486793 COL11A2P13942 1736 aaPredicted RBP24.87■■□□□ 1.57
GMDS-205ENST00000486793 PNISRQ8TF01 805 aaKnown RBP24.87■■□□□ 1.57
GMDS-205ENST00000486793 PLEKHF1Q96S99 279 aa24.87■■□□□ 1.57
GMDS-205ENST00000486793 FKBP4Q02790 459 aaKnown RBP eCLIP24.86■■□□□ 1.57
GMDS-205ENST00000486793 ZNF277Q9NRM2 450 aaPredicted RBP24.86■■□□□ 1.57
GMDS-205ENST00000486793 RRP7AQ9Y3A4 280 aaKnown RBP24.86■■□□□ 1.57
GMDS-205ENST00000486793 ALDH1B1P30837 517 aa24.85■■□□□ 1.57
GMDS-205ENST00000486793 EIF4A1P60842 406 aaKnown RBP24.85■■□□□ 1.57
GMDS-205ENST00000486793 THUMPD2Q9BTF0 503 aaKnown RBP24.85■■□□□ 1.57
GMDS-205ENST00000486793 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
GMDS-205ENST00000486793 RTKN2Q8IZC4 609 aa24.84■■□□□ 1.57
GMDS-205ENST00000486793 ERVV-1B6SEH8 477 aa24.83■■□□□ 1.57
GMDS-205ENST00000486793 NFE2L2Q16236 605 aa24.83■■□□□ 1.57
GMDS-205ENST00000486793 TTLL7Q6ZT98 887 aa24.83■■□□□ 1.57
GMDS-205ENST00000486793 TIAM2Q8IVF5 1701 aa24.83■■□□□ 1.57
GMDS-205ENST00000486793 IQCA1LA6NCM1 817 aa24.82■■□□□ 1.56
GMDS-205ENST00000486793 NUTM1Q86Y26 1132 aa24.82■■□□□ 1.56
GMDS-205ENST00000486793 L3MBTL3Q96JM7 780 aaPredicted RBP24.82■■□□□ 1.56
GMDS-205ENST00000486793 FER1L6Q2WGJ9 1857 aa24.81■■□□□ 1.56
GMDS-205ENST00000486793 MYL6BP14649 208 aa24.81■■□□□ 1.56
GMDS-205ENST00000486793 SYNE4Q8N205 404 aa24.81■■□□□ 1.56
GMDS-205ENST00000486793 TAF1DQ9H5J8 278 aaPredicted RBP24.81■■□□□ 1.56
GMDS-205ENST00000486793 MAP3K15Q6ZN16 1313 aa24.81■■□□□ 1.56
GMDS-205ENST00000486793 BCORQ6W2J9 1755 aa24.8■■□□□ 1.56
GMDS-205ENST00000486793 HSPA1AP0DMV8 641 aaKnown RBP24.8■■□□□ 1.56
GMDS-205ENST00000486793 HSPA1BP0DMV9 641 aaKnown RBP24.8■■□□□ 1.56
GMDS-205ENST00000486793 NYXQ9GZU5 481 aa24.8■■□□□ 1.56
GMDS-205ENST00000486793 CREBZFQ9NS37 354 aa24.8■■□□□ 1.56
GMDS-205ENST00000486793 CRY2Q49AN0 593 aa24.79■■□□□ 1.56
GMDS-205ENST00000486793 KIF6Q6ZMV9 814 aa24.79■■□□□ 1.56
GMDS-205ENST00000486793 ZNF541Q9H0D2 1346 aa24.79■■□□□ 1.56
GMDS-205ENST00000486793 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
GMDS-205ENST00000486793 GPTP24298 496 aa24.78■■□□□ 1.56
GMDS-205ENST00000486793 LDHDQ86WU2 507 aa24.78■■□□□ 1.56
GMDS-205ENST00000486793 PNNQ9H307 717 aaKnown RBP24.78■■□□□ 1.56
GMDS-205ENST00000486793 ZBTB3Q9H5J0 574 aa24.78■■□□□ 1.56
GMDS-205ENST00000486793 IARSP41252 1262 aaKnown RBP24.77■■□□□ 1.56
GMDS-205ENST00000486793 MKRN1Q9UHC7 482 aaKnown RBP24.77■■□□□ 1.56
GMDS-205ENST00000486793 ABCC12Q96J65 1359 aa24.77■■□□□ 1.56
GMDS-205ENST00000486793 EAPPQ56P03 285 aaPredicted RBP24.76■■□□□ 1.55
GMDS-205ENST00000486793 SUSD4Q5VX71 490 aa24.76■■□□□ 1.55
GMDS-205ENST00000486793 TNS4Q8IZW8 715 aa24.76■■□□□ 1.55
GMDS-205ENST00000486793 MAPK8IP3Q9UPT6 1336 aa24.76■■□□□ 1.55
GMDS-205ENST00000486793 FZD9O00144 591 aa24.75■■□□□ 1.55
GMDS-205ENST00000486793 ZNF34Q8IZ26 560 aa24.75■■□□□ 1.55
GMDS-205ENST00000486793 HACL1Q9UJ83 578 aa24.75■■□□□ 1.55
GMDS-205ENST00000486793 HOXA10P31260 410 aaPredicted RBP24.74■■□□□ 1.55
GMDS-205ENST00000486793 PSMD1Q99460 953 aa24.74■■□□□ 1.55
GMDS-205ENST00000486793 UBN2Q6ZU65 1347 aa24.74■■□□□ 1.55
GMDS-205ENST00000486793 PASKQ96RG2 1323 aa24.74■■□□□ 1.55
GMDS-205ENST00000486793 ITGBL1O95965 494 aaPredicted RBP24.73■■□□□ 1.55
GMDS-205ENST00000486793 EPHX2P34913 555 aa24.73■■□□□ 1.55
GMDS-205ENST00000486793 CC2D2BQ6DHV5 1058 aa24.73■■□□□ 1.55
GMDS-205ENST00000486793 RPGRQ92834 1020 aaKnown RBP24.73■■□□□ 1.55
GMDS-205ENST00000486793 TSPYL4Q9UJ04 414 aa24.73■■□□□ 1.55
GMDS-205ENST00000486793 CLEC11AQ9Y240 323 aa24.73■■□□□ 1.55
GMDS-205ENST00000486793 GIGYF2Q6Y7W6 1299 aaKnown RBP24.72■■□□□ 1.55
GMDS-205ENST00000486793 JDP2Q8WYK2 163 aa24.72■■□□□ 1.55
GMDS-205ENST00000486793 DICER1Q9UPY3 1922 aaKnown RBP24.71■■□□□ 1.55
GMDS-205ENST00000486793 CAPN15O75808 1086 aa24.71■■□□□ 1.55
GMDS-205ENST00000486793 RIPK4P57078 832 aa24.71■■□□□ 1.55
GMDS-205ENST00000486793 ERBB4Q15303 1308 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms