RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 KCNA3P22001 575 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 ALDH1B1P30837 517 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 GRIPAP1Q4V328 841 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 TBC1D9BQ66K14 1250 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 ZNF526Q8TF50 670 aaPredicted RBP9.78□□□□□ -0.84
CPNE1-226ENST00000486021 MASTLQ96GX5 879 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 PLEKHF1Q96S99 279 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 RNF181Q9P0P0 153 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 TSPYL4Q9UJ04 414 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 FER1L6Q2WGJ9 1857 aa9.78□□□□□ -0.84
CPNE1-226ENST00000486021 CAMTA2O94983 1202 aa9.77□□□□□ -0.85
CPNE1-226ENST00000486021 LMNB1P20700 586 aa9.77□□□□□ -0.85
CPNE1-226ENST00000486021 CHRNA5P30532 468 aa9.77□□□□□ -0.85
CPNE1-226ENST00000486021 DCTN1Q14203 1278 aa9.77□□□□□ -0.85
CPNE1-226ENST00000486021 C9orf131Q5VYM1 1079 aa9.77□□□□□ -0.85
CPNE1-226ENST00000486021 STYK1Q6J9G0 422 aa9.77□□□□□ -0.85
CPNE1-226ENST00000486021 PPP1R42Q7Z4L9 355 aa9.77□□□□□ -0.85
CPNE1-226ENST00000486021 RUNDC1Q96C34 613 aa9.77□□□□□ -0.85
CPNE1-226ENST00000486021 NIP7Q9Y221 180 aaKnown RBP eCLIP9.77□□□□□ -0.85
CPNE1-226ENST00000486021 TIAM2Q8IVF5 1701 aa9.76□□□□□ -0.85
CPNE1-226ENST00000486021 HSP90AB3PQ58FF7 597 aa9.76□□□□□ -0.85
CPNE1-226ENST00000486021 PRR5LQ6MZQ0 368 aa9.76□□□□□ -0.85
CPNE1-226ENST00000486021 BCL2L12Q9HB09 334 aa9.76□□□□□ -0.85
CPNE1-226ENST00000486021 ANKRD36CQ5JPF3 1778 aa9.75□□□□□ -0.85
CPNE1-226ENST00000486021 KCNQ3O43525 872 aa9.75□□□□□ -0.85
CPNE1-226ENST00000486021 NPR1P16066 1061 aa9.75□□□□□ -0.85
CPNE1-226ENST00000486021 TMPOP42166 694 aaKnown RBP9.75□□□□□ -0.85
CPNE1-226ENST00000486021 EIF4A1P60842 406 aaKnown RBP9.75□□□□□ -0.85
CPNE1-226ENST00000486021 RRP7AQ9Y3A4 280 aaKnown RBP9.75□□□□□ -0.85
CPNE1-226ENST00000486021 HSP90B1P14625 803 aaKnown RBP9.74□□□□□ -0.85
CPNE1-226ENST00000486021 HSPA6P17066 643 aa9.74□□□□□ -0.85
CPNE1-226ENST00000486021 FSTL1Q12841 308 aa9.74□□□□□ -0.85
CPNE1-226ENST00000486021 PARP10Q53GL7 1025 aa9.74□□□□□ -0.85
CPNE1-226ENST00000486021 CC2D2BQ6DHV5 1058 aa9.74□□□□□ -0.85
CPNE1-226ENST00000486021 RTKN2Q8IZC4 609 aa9.74□□□□□ -0.85
CPNE1-226ENST00000486021 RBM46Q8TBY0 533 aaKnown RBP9.74□□□□□ -0.85
CPNE1-226ENST00000486021 RNF123Q5XPI4 1314 aa9.74□□□□□ -0.85
CPNE1-226ENST00000486021 MAP3K15Q6ZN16 1313 aa9.74□□□□□ -0.85
CPNE1-226ENST00000486021 CACNA1FO60840 1977 aa9.74□□□□□ -0.85
CPNE1-226ENST00000486021 HOXB7P09629 217 aa9.73□□□□□ -0.85
CPNE1-226ENST00000486021 SRGNP10124 158 aa9.73□□□□□ -0.85
CPNE1-226ENST00000486021 VEGFAP15692 232 aaPredicted RBP9.73□□□□□ -0.85
CPNE1-226ENST00000486021 APLP1P51693 650 aa9.73□□□□□ -0.85
CPNE1-226ENST00000486021 CCDC93Q567U6 631 aa9.73□□□□□ -0.85
CPNE1-226ENST00000486021 NGEFQ8N5V2 710 aa9.73□□□□□ -0.85
CPNE1-226ENST00000486021 RPGRQ92834 1020 aaKnown RBP9.73□□□□□ -0.85
CPNE1-226ENST00000486021 TAOK3Q9H2K8 898 aa9.73□□□□□ -0.85
CPNE1-226ENST00000486021 LTBP3Q9NS15 1303 aa9.73□□□□□ -0.85
CPNE1-226ENST00000486021 IBTKQ9P2D0 1353 aaPredicted RBP9.73□□□□□ -0.85
CPNE1-226ENST00000486021 SCN4AP35499 1836 aa9.72□□□□□ -0.85
CPNE1-226ENST00000486021 SLX4Q8IY92 1834 aa9.72□□□□□ -0.85
CPNE1-226ENST00000486021 GLTPD2A6NH11 291 aa9.72□□□□□ -0.85
CPNE1-226ENST00000486021 MYL6BP14649 208 aa9.72□□□□□ -0.85
CPNE1-226ENST00000486021 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
CPNE1-226ENST00000486021 ERFEQ4G0M1 354 aa9.72□□□□□ -0.85
CPNE1-226ENST00000486021 GIGYF2Q6Y7W6 1299 aaKnown RBP9.72□□□□□ -0.85
CPNE1-226ENST00000486021 PRKRIP1Q9H875 184 aaPredicted RBP9.72□□□□□ -0.85
CPNE1-226ENST00000486021 MIS18AQ9NYP9 233 aa9.72□□□□□ -0.85
CPNE1-226ENST00000486021 LAS1LQ9Y4W2 734 aaKnown RBP9.72□□□□□ -0.85
CPNE1-226ENST00000486021 COL11A2P13942 1736 aaPredicted RBP9.72□□□□□ -0.85
CPNE1-226ENST00000486021 IQCA1LA6NCM1 817 aa9.71□□□□□ -0.86
CPNE1-226ENST00000486021 KIF3CO14782 793 aa9.71□□□□□ -0.86
CPNE1-226ENST00000486021 C21orf2O43822 256 aa9.71□□□□□ -0.86
CPNE1-226ENST00000486021 EIF2S2P20042 333 aaKnown RBP9.71□□□□□ -0.86
CPNE1-226ENST00000486021 GNAI1P63096 354 aa9.71□□□□□ -0.86
CPNE1-226ENST00000486021 SMC1BQ8NDV3 1235 aa9.71□□□□□ -0.86
CPNE1-226ENST00000486021 RBM17Q96I25 401 aaKnown RBP9.71□□□□□ -0.86
CPNE1-226ENST00000486021 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
CPNE1-226ENST00000486021 RIC1Q4ADV7 1423 aa9.71□□□□□ -0.86
CPNE1-226ENST00000486021 PRAMEF22A3QJZ6 481 aa9.7□□□□□ -0.86
CPNE1-226ENST00000486021 NBPF26B4DH59 902 aa9.7□□□□□ -0.86
CPNE1-226ENST00000486021 ANP32CO43423 234 aa9.7□□□□□ -0.86
CPNE1-226ENST00000486021 PRPF40BQ6NWY9 871 aaKnown RBP9.7□□□□□ -0.86
CPNE1-226ENST00000486021 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
CPNE1-226ENST00000486021 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
CPNE1-226ENST00000486021 JDP2Q8WYK2 163 aa9.7□□□□□ -0.86
CPNE1-226ENST00000486021 CFAP44Q96MT7 982 aa9.7□□□□□ -0.86
CPNE1-226ENST00000486021 RRAGCQ9HB90 399 aa9.7□□□□□ -0.86
CPNE1-226ENST00000486021 DBF4Q9UBU7 674 aaPredicted RBP9.7□□□□□ -0.86
CPNE1-226ENST00000486021 WDR90Q96KV7 1748 aa9.7□□□□□ -0.86
CPNE1-226ENST00000486021 KLRG2A4D1S0 409 aaPredicted RBP9.69□□□□□ -0.86
CPNE1-226ENST00000486021 FAM177BA6PVY3 158 aa9.69□□□□□ -0.86
CPNE1-226ENST00000486021 PIP4K2AP48426 406 aaPredicted RBP9.69□□□□□ -0.86
CPNE1-226ENST00000486021 CCDC146Q8IYE0 955 aa9.69□□□□□ -0.86
CPNE1-226ENST00000486021 SUPT20HQ8NEM7 779 aa9.69□□□□□ -0.86
CPNE1-226ENST00000486021 UTP14AQ9BVJ6 771 aaKnown RBP9.69□□□□□ -0.86
CPNE1-226ENST00000486021 VPS33BQ9H267 617 aa9.69□□□□□ -0.86
CPNE1-226ENST00000486021 DDX21Q9NR30 783 aaKnown RBP eCLIP9.69□□□□□ -0.86
CPNE1-226ENST00000486021 HYPKQ9NX55 129 aa9.69□□□□□ -0.86
CPNE1-226ENST00000486021 ADAMTS8Q9UP79 889 aa9.69□□□□□ -0.86
CPNE1-226ENST00000486021 UTRNP46939 3433 aa9.69□□□□□ -0.86
CPNE1-226ENST00000486021 CHL1O00533 1208 aa9.68□□□□□ -0.86
CPNE1-226ENST00000486021 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
CPNE1-226ENST00000486021 RASSF7Q02833 373 aa9.68□□□□□ -0.86
CPNE1-226ENST00000486021 HLFQ16534 295 aa9.68□□□□□ -0.86
CPNE1-226ENST00000486021 HDGFL1Q5TGJ6 251 aa9.68□□□□□ -0.86
CPNE1-226ENST00000486021 TMC4Q7Z404 712 aa9.68□□□□□ -0.86
CPNE1-226ENST00000486021 THUMPD2Q9BTF0 503 aaKnown RBP9.68□□□□□ -0.86
CPNE1-226ENST00000486021 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
CPNE1-226ENST00000486021 ZNF219Q9P2Y4 722 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms