RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 PLA2G4AP47712 749 aa8.71□□□□□ -1.02
SRRM1-213ENST00000485441 NBPF10Q6P3W6 841 aaKnown RBP8.71□□□□□ -1.02
SRRM1-213ENST00000485441 TRIM46Q7Z4K8 759 aa8.71□□□□□ -1.02
SRRM1-213ENST00000485441 POLMQ9NP87 494 aaPredicted RBP8.71□□□□□ -1.02
SRRM1-213ENST00000485441 BRPF3Q9ULD4 1205 aa8.71□□□□□ -1.02
SRRM1-213ENST00000485441 TREHO43280 583 aa8.7□□□□□ -1.02
SRRM1-213ENST00000485441 NDUFB5O43674 189 aa8.7□□□□□ -1.02
SRRM1-213ENST00000485441 BMP2P12643 396 aa8.7□□□□□ -1.02
SRRM1-213ENST00000485441 PHKA2P46019 1235 aa8.7□□□□□ -1.02
SRRM1-213ENST00000485441 UPP2O95045 317 aa8.69□□□□□ -1.02
SRRM1-213ENST00000485441 ATP4AP20648 1035 aa8.69□□□□□ -1.02
SRRM1-213ENST00000485441 MZF1P28698 734 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-213ENST00000485441 C6orf118Q5T5N4 469 aa8.69□□□□□ -1.02
SRRM1-213ENST00000485441 PRICKLE2Q7Z3G6 844 aa8.69□□□□□ -1.02
SRRM1-213ENST00000485441 GIPC2Q8TF65 315 aa8.69□□□□□ -1.02
SRRM1-213ENST00000485441 IGSF5Q9NSI5 407 aa8.69□□□□□ -1.02
SRRM1-213ENST00000485441 SOS2Q07890 1332 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-213ENST00000485441 FAM187AA6NFU0 413 aa8.68□□□□□ -1.02
SRRM1-213ENST00000485441 OPLAHO14841 1288 aa8.68□□□□□ -1.02
SRRM1-213ENST00000485441 ZAP70P43403 619 aa8.68□□□□□ -1.02
SRRM1-213ENST00000485441 FMR1Q06787 632 aaKnown RBP eCLIP8.68□□□□□ -1.02
SRRM1-213ENST00000485441 LYSMD3Q7Z3D4 306 aa8.68□□□□□ -1.02
SRRM1-213ENST00000485441 TREML1Q86YW5 311 aa8.68□□□□□ -1.02
SRRM1-213ENST00000485441 GJD3Q8N144 294 aa8.68□□□□□ -1.02
SRRM1-213ENST00000485441 ZNF280CQ8ND82 737 aa8.68□□□□□ -1.02
SRRM1-213ENST00000485441 POLIQ9UNA4 740 aa8.68□□□□□ -1.02
SRRM1-213ENST00000485441 GPC6Q9Y625 555 aaPredicted RBP8.68□□□□□ -1.02
SRRM1-213ENST00000485441 DGAT1O75907 488 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 MICAL2O94851 1124 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 PDGFAP04085 211 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 CTC1Q2NKJ3 1217 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 IER5Q5VY09 327 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 CRIPAKQ8N1N5 446 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 AIDAQ96BJ3 306 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 ALKBH8Q96BT7 664 aaKnown RBP8.67□□□□□ -1.02
SRRM1-213ENST00000485441 SUSD3Q96L08 255 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 DMRTB1Q96MA1 342 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 ZIC5Q96T25 663 aa8.67□□□□□ -1.02
SRRM1-213ENST00000485441 TTLL8A6PVC2 850 aa8.66□□□□□ -1.02
SRRM1-213ENST00000485441 TGFBR3LH3BV60 316 aa8.66□□□□□ -1.02
SRRM1-213ENST00000485441 GPR182O15218 404 aa8.66□□□□□ -1.02
SRRM1-213ENST00000485441 P4HBP07237 508 aaKnown RBP8.66□□□□□ -1.02
SRRM1-213ENST00000485441 AAMPQ13685 434 aa8.66□□□□□ -1.02
SRRM1-213ENST00000485441 NBPF1Q3BBV0 1214 aa8.66□□□□□ -1.02
SRRM1-213ENST00000485441 RHPN1Q8TCX5 695 aa8.66□□□□□ -1.02
SRRM1-213ENST00000485441 EDEM1Q92611 657 aa8.66□□□□□ -1.02
SRRM1-213ENST00000485441 BMP1P13497 986 aa8.65□□□□□ -1.02
SRRM1-213ENST00000485441 RHOQP17081 205 aa8.65□□□□□ -1.02
SRRM1-213ENST00000485441 MSX1P28360 303 aa8.65□□□□□ -1.02
SRRM1-213ENST00000485441 PLCB3Q01970 1234 aa8.65□□□□□ -1.02
SRRM1-213ENST00000485441 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
SRRM1-213ENST00000485441 ZNF326Q5BKZ1 582 aaKnown RBP8.65□□□□□ -1.02
SRRM1-213ENST00000485441 MRRFQ96E11 262 aaKnown RBP8.65□□□□□ -1.02
SRRM1-213ENST00000485441 GGNBP2Q9H3C7 697 aa8.65□□□□□ -1.02
SRRM1-213ENST00000485441 FIGNL2A6NMB9 653 aa8.64□□□□□ -1.03
SRRM1-213ENST00000485441 VAMP1P23763 118 aa8.64□□□□□ -1.03
SRRM1-213ENST00000485441 DNM1Q05193 864 aaKnown RBP8.64□□□□□ -1.03
SRRM1-213ENST00000485441 EHHADHQ08426 723 aa8.64□□□□□ -1.03
SRRM1-213ENST00000485441 SCARF1Q14162 830 aa8.64□□□□□ -1.03
SRRM1-213ENST00000485441 HIF1AQ16665 826 aa8.64□□□□□ -1.03
SRRM1-213ENST00000485441 EAPPQ56P03 285 aaPredicted RBP8.64□□□□□ -1.03
SRRM1-213ENST00000485441 ZFP42Q96MM3 310 aa8.64□□□□□ -1.03
SRRM1-213ENST00000485441 A0A1B0GTH6 734 aa8.63□□□□□ -1.03
SRRM1-213ENST00000485441 TATP17735 454 aaPredicted RBP8.63□□□□□ -1.03
SRRM1-213ENST00000485441 INPP5BP32019 993 aa8.63□□□□□ -1.03
SRRM1-213ENST00000485441 USP5P45974 858 aa8.63□□□□□ -1.03
SRRM1-213ENST00000485441 GPR152Q8TDT2 470 aa8.63□□□□□ -1.03
SRRM1-213ENST00000485441 HSH2DQ96JZ2 352 aa8.63□□□□□ -1.03
SRRM1-213ENST00000485441 TIMMDC1Q9NPL8 285 aa8.63□□□□□ -1.03
SRRM1-213ENST00000485441 GRNP28799 593 aaKnown RBP8.62□□□□□ -1.03
SRRM1-213ENST00000485441 NIF3L1Q9GZT8 377 aa8.62□□□□□ -1.03
SRRM1-213ENST00000485441 CRISPLD1Q9H336 500 aa8.62□□□□□ -1.03
SRRM1-213ENST00000485441 ANKIB1Q9P2G1 1089 aa8.62□□□□□ -1.03
SRRM1-213ENST00000485441 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
SRRM1-213ENST00000485441 SENP3-EIF4A1A0A087X0R7 540 aa8.61□□□□□ -1.03
SRRM1-213ENST00000485441 NRG2O14511 850 aaPredicted RBP8.61□□□□□ -1.03
SRRM1-213ENST00000485441 GFRA3O60609 400 aa8.61□□□□□ -1.03
SRRM1-213ENST00000485441 IDH3AP50213 366 aa8.61□□□□□ -1.03
SRRM1-213ENST00000485441 BTLAQ7Z6A9 289 aa8.61□□□□□ -1.03
SRRM1-213ENST00000485441 TMC1Q8TDI8 760 aa8.61□□□□□ -1.03
SRRM1-213ENST00000485441 NUDT16Q96DE0 195 aaKnown RBP8.61□□□□□ -1.03
SRRM1-213ENST00000485441 A0A1W2PNR3 127 aa8.6□□□□□ -1.03
SRRM1-213ENST00000485441 AXIN1O15169 862 aa8.6□□□□□ -1.03
SRRM1-213ENST00000485441 XKR5Q6UX68 686 aa8.6□□□□□ -1.03
SRRM1-213ENST00000485441 LRRC69Q6ZNQ3 347 aa8.6□□□□□ -1.03
SRRM1-213ENST00000485441 DYRK1BQ9Y463 629 aa8.6□□□□□ -1.03
SRRM1-213ENST00000485441 ENOX2Q16206 610 aaKnown RBP8.59□□□□□ -1.03
SRRM1-213ENST00000485441 PKDCCQ504Y2 493 aa8.59□□□□□ -1.03
SRRM1-213ENST00000485441 BICDL1Q6ZP65 573 aa8.59□□□□□ -1.03
SRRM1-213ENST00000485441 FAM13BQ9NYF5 915 aa8.59□□□□□ -1.03
SRRM1-213ENST00000485441 WWC3Q9ULE0 1092 aa8.59□□□□□ -1.03
SRRM1-213ENST00000485441 KCNMB2Q9Y691 235 aa8.59□□□□□ -1.03
SRRM1-213ENST00000485441 F11P03951 625 aa8.58□□□□□ -1.04
SRRM1-213ENST00000485441 MRPL58Q14197 206 aaKnown RBP8.58□□□□□ -1.04
SRRM1-213ENST00000485441 ARSJQ5FYB0 599 aaPredicted RBP8.58□□□□□ -1.04
SRRM1-213ENST00000485441 LDLRAD1Q5T700 205 aa8.58□□□□□ -1.04
SRRM1-213ENST00000485441 PIK3R5Q8WYR1 880 aa8.58□□□□□ -1.04
SRRM1-213ENST00000485441 CFHR5Q9BXR6 569 aa8.58□□□□□ -1.04
SRRM1-213ENST00000485441 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
SRRM1-213ENST00000485441 RNF19AQ9NV58 838 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms