RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 LGR6Q9HBX8 967 aa11.17□□□□□ -0.62
USP16-206ENST00000485067 AXIN2Q9Y2T1 843 aa11.17□□□□□ -0.62
USP16-206ENST00000485067 GCP02774 474 aa11.16□□□□□ -0.62
USP16-206ENST00000485067 MEIS3Q99687 375 aa11.16□□□□□ -0.62
USP16-206ENST00000485067 SEMA3EO15041 775 aa11.16□□□□□ -0.62
USP16-206ENST00000485067 NRDCO43847 1150 aa11.16□□□□□ -0.62
USP16-206ENST00000485067 GNAI3P08754 354 aa11.16□□□□□ -0.62
USP16-206ENST00000485067 GSPT1P15170 499 aaKnown RBP11.16□□□□□ -0.62
USP16-206ENST00000485067 MYBPC2Q14324 1141 aa11.16□□□□□ -0.62
USP16-206ENST00000485067 TAF7Q15545 349 aaPredicted RBP11.16□□□□□ -0.62
USP16-206ENST00000485067 ZNF513Q8N8E2 541 aaPredicted RBP11.16□□□□□ -0.62
USP16-206ENST00000485067 KCNH5Q8NCM2 988 aa11.16□□□□□ -0.62
USP16-206ENST00000485067 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
USP16-206ENST00000485067 GNAI2P04899 355 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 ZSCAN20P17040 1043 aaPredicted RBP11.15□□□□□ -0.62
USP16-206ENST00000485067 CHMP4CQ96CF2 233 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 KCNQ3O43525 872 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 ZMYND10O75800 440 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 BRD1O95696 1058 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 DDIT3P35638 169 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 C1orf167Q5SNV9 1468 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 KRT28Q7Z3Y7 464 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 KIF2CQ99661 725 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 RGPD5Q99666 1765 aa11.15□□□□□ -0.62
USP16-206ENST00000485067 TRPM3Q9HCF6 1732 aaPredicted RBP11.14□□□□□ -0.63
USP16-206ENST00000485067 HSP90AB1P08238 724 aaKnown RBP11.14□□□□□ -0.63
USP16-206ENST00000485067 POLD1P28340 1107 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 MCM4P33991 863 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 ZC3H6P61129 1189 aaKnown RBP11.14□□□□□ -0.63
USP16-206ENST00000485067 FLIIQ13045 1269 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 ZKSCAN8Q15776 578 aaPredicted RBP11.14□□□□□ -0.63
USP16-206ENST00000485067 SLC4A10Q6U841 1118 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 RNF217Q8TC41 542 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 OSBPL3Q9H4L5 887 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 LMO7Q8WWI1 1683 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 PXDNQ92626 1479 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 TMEM94Q12767 1356 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 ARHGEF25Q86VW2 580 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 CABLES1Q8TDN4 633 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 TSPAN18Q96SJ8 248 aa11.14□□□□□ -0.63
USP16-206ENST00000485067 MED1Q15648 1581 aaPredicted RBP11.13□□□□□ -0.63
USP16-206ENST00000485067 CEMIPQ8WUJ3 1361 aa11.13□□□□□ -0.63
USP16-206ENST00000485067 KDM3BQ7LBC6 1761 aa11.13□□□□□ -0.63
USP16-206ENST00000485067 POLA2Q14181 598 aa11.13□□□□□ -0.63
USP16-206ENST00000485067 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
USP16-206ENST00000485067 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
USP16-206ENST00000485067 HOXB7P09629 217 aa11.12□□□□□ -0.63
USP16-206ENST00000485067 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
USP16-206ENST00000485067 RABEP1Q15276 862 aa11.12□□□□□ -0.63
USP16-206ENST00000485067 MPRIPQ6WCQ1 1025 aa11.12□□□□□ -0.63
USP16-206ENST00000485067 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
USP16-206ENST00000485067 K7ELQ4 463 aaPredicted RBP11.12□□□□□ -0.63
USP16-206ENST00000485067 MTA1Q13330 715 aa11.12□□□□□ -0.63
USP16-206ENST00000485067 C16orf71Q8IYS4 520 aaPredicted RBP11.12□□□□□ -0.63
USP16-206ENST00000485067 C19orf44Q9H6X5 657 aa11.12□□□□□ -0.63
USP16-206ENST00000485067 IRX5P78411 483 aaPredicted RBP11.11□□□□□ -0.63
USP16-206ENST00000485067 L1TD1Q5T7N2 865 aaKnown RBP11.11□□□□□ -0.63
USP16-206ENST00000485067 EP400NLQ6ZTU2 488 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 OTUD7AQ8TE49 926 aaPredicted RBP11.11□□□□□ -0.63
USP16-206ENST00000485067 ANKRD24Q8TF21 1146 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 TUBGCP6Q96RT7 1819 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 SLIT3O75094 1523 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 REC8O95072 547 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 SDSP20132 328 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 ATP8B2P98198 1209 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 OVOS2A0A0G2JMS6 1433 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 MST1RQ04912 1400 aa11.11□□□□□ -0.63
USP16-206ENST00000485067 SMARCA5O60264 1052 aaPredicted RBP11.1□□□□□ -0.63
USP16-206ENST00000485067 ANXA1P04083 346 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 SETDB1Q15047 1291 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 DNAJC14Q6Y2X3 702 aaPredicted RBP11.1□□□□□ -0.63
USP16-206ENST00000485067 ANKRD23Q86SG2 305 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 PHAXQ9H814 394 aaKnown RBP11.1□□□□□ -0.63
USP16-206ENST00000485067 NCAPD2Q15021 1401 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 AMOTQ4VCS5 1084 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 ZNF530Q6P9A1 599 aaPredicted RBP11.1□□□□□ -0.63
USP16-206ENST00000485067 NME8Q8N427 588 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 GBP4Q96PP9 640 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 CEP83Q9Y592 693 aa11.1□□□□□ -0.63
USP16-206ENST00000485067 KIF1AQ12756 1690 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 PDE1AP54750 535 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 HDGFL1Q5TGJ6 251 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 SRCIN1Q9C0H9 1055 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 MRVI1Q9Y6F6 885 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 CAMTA1Q9Y6Y1 1673 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 PRAMEF22A3QJZ6 481 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 EIF2S2P20042 333 aaKnown RBP11.09□□□□□ -0.63
USP16-206ENST00000485067 RAB3GAP1Q15042 981 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 CHRNA2Q15822 529 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 PLEKHO1Q53GL0 409 aaPredicted RBP11.09□□□□□ -0.63
USP16-206ENST00000485067 SDR16C5Q8N3Y7 309 aa11.09□□□□□ -0.63
USP16-206ENST00000485067 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
USP16-206ENST00000485067 RBM28Q9NW13 759 aaKnown RBP11.09□□□□□ -0.63
USP16-206ENST00000485067 IBTKQ9P2D0 1353 aaPredicted RBP11.08□□□□□ -0.63
USP16-206ENST00000485067 LMTK3Q96Q04 1460 aa11.08□□□□□ -0.64
USP16-206ENST00000485067 ERC2O15083 957 aa11.08□□□□□ -0.64
USP16-206ENST00000485067 ATF3P18847 181 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms