RNA–Protein interactions for RNA: ENST00000484141.5

PCGF3-211, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-211ENST00000484141 RIPK4P57078 832 aa22.06■■□□□ 1.12
PCGF3-211ENST00000484141 PCNTO95613 3336 aa22.05■■□□□ 1.12
PCGF3-211ENST00000484141 LAMB4A4D0S4 1761 aa22.05■■□□□ 1.12
PCGF3-211ENST00000484141 EIF4A1P60842 406 aaKnown RBP22.05■■□□□ 1.12
PCGF3-211ENST00000484141 HSPA1AP0DMV8 641 aaKnown RBP22.04■■□□□ 1.12
PCGF3-211ENST00000484141 HSPA1BP0DMV9 641 aaKnown RBP22.04■■□□□ 1.12
PCGF3-211ENST00000484141 VEGFAP15692 232 aaPredicted RBP22.04■■□□□ 1.12
PCGF3-211ENST00000484141 LMNB1P20700 586 aa22.04■■□□□ 1.12
PCGF3-211ENST00000484141 TMPOP42166 694 aaKnown RBP22.04■■□□□ 1.12
PCGF3-211ENST00000484141 PRKRIP1Q9H875 184 aaPredicted RBP22.04■■□□□ 1.12
PCGF3-211ENST00000484141 DLEC1Q9Y238 1755 aa22.04■■□□□ 1.12
PCGF3-211ENST00000484141 NEUROD2Q15784 382 aa22.03■■□□□ 1.12
PCGF3-211ENST00000484141 PRR5LQ6MZQ0 368 aa22.03■■□□□ 1.12
PCGF3-211ENST00000484141 NGEFQ8N5V2 710 aa22.03■■□□□ 1.12
PCGF3-211ENST00000484141 GLTPD2A6NH11 291 aa22.02■■□□□ 1.12
PCGF3-211ENST00000484141 C2CD5Q86YS7 1000 aa22.02■■□□□ 1.12
PCGF3-211ENST00000484141 PNNQ9H307 717 aaKnown RBP22.02■■□□□ 1.12
PCGF3-211ENST00000484141 ADAMTS8Q9UP79 889 aa22.02■■□□□ 1.12
PCGF3-211ENST00000484141 COL11A2P13942 1736 aaPredicted RBP22.02■■□□□ 1.12
PCGF3-211ENST00000484141 HLFQ16534 295 aa22.01■■□□□ 1.11
PCGF3-211ENST00000484141 SBF1O95248 1867 aa22■■□□□ 1.11
PCGF3-211ENST00000484141 NPM2Q86SE8 214 aaKnown RBP22■■□□□ 1.11
PCGF3-211ENST00000484141 PNISRQ8TF01 805 aaKnown RBP22■■□□□ 1.11
PCGF3-211ENST00000484141 SETDB2Q96T68 719 aa21.99■■□□□ 1.11
PCGF3-211ENST00000484141 TSPYL4Q9UJ04 414 aa21.99■■□□□ 1.11
PCGF3-211ENST00000484141 TTLL6Q8N841 843 aa21.98■■□□□ 1.11
PCGF3-211ENST00000484141 CACNA1SQ13698 1873 aa21.97■■□□□ 1.11
PCGF3-211ENST00000484141 FAM177BA6PVY3 158 aa21.97■■□□□ 1.11
PCGF3-211ENST00000484141 MYL6BP14649 208 aa21.97■■□□□ 1.11
PCGF3-211ENST00000484141 WDR43Q15061 677 aaKnown RBP eCLIP21.97■■□□□ 1.11
PCGF3-211ENST00000484141 TTLL7Q6ZT98 887 aa21.97■■□□□ 1.11
PCGF3-211ENST00000484141 TRIM35Q9UPQ4 493 aa21.97■■□□□ 1.11
PCGF3-211ENST00000484141 H0YIN7 160 aa21.96■■□□□ 1.11
PCGF3-211ENST00000484141 KRT24Q2M2I5 525 aa21.96■■□□□ 1.11
PCGF3-211ENST00000484141 CCDC184Q52MB2 194 aa21.96■■□□□ 1.11
PCGF3-211ENST00000484141 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
PCGF3-211ENST00000484141 ZNF219Q9P2Y4 722 aaPredicted RBP21.96■■□□□ 1.11
PCGF3-211ENST00000484141 NUP98P52948 1817 aa21.95■■□□□ 1.1
PCGF3-211ENST00000484141 CNBD1Q8NA66 436 aa21.95■■□□□ 1.1
PCGF3-211ENST00000484141 ZNF622Q969S3 477 aaKnown RBP eCLIP21.95■■□□□ 1.12e-6■■■□□ 15.3
PCGF3-211ENST00000484141 BRIP1Q9BX63 1249 aa21.95■■□□□ 1.1
PCGF3-211ENST00000484141 ANXA1P04083 346 aa21.94■■□□□ 1.1
PCGF3-211ENST00000484141 NIP7Q9Y221 180 aaKnown RBP eCLIP21.94■■□□□ 1.1
PCGF3-211ENST00000484141 CCDC88AQ3V6T2 1871 aa21.94■■□□□ 1.1
PCGF3-211ENST00000484141 NFKBIEO00221 500 aa21.93■■□□□ 1.1
PCGF3-211ENST00000484141 EIF2S2P20042 333 aaKnown RBP21.93■■□□□ 1.1
PCGF3-211ENST00000484141 PROSER3Q2NL68 480 aa21.93■■□□□ 1.1
PCGF3-211ENST00000484141 CLEC4GQ6UXB4 293 aa21.93■■□□□ 1.1
PCGF3-211ENST00000484141 NECTIN2Q92692 538 aa21.93■■□□□ 1.1
PCGF3-211ENST00000484141 SLX4Q8IY92 1834 aa21.92■■□□□ 1.1
PCGF3-211ENST00000484141 NPHP1O15259 732 aa21.92■■□□□ 1.1
PCGF3-211ENST00000484141 DPY19L2Q6NUT2 758 aa21.92■■□□□ 1.1
PCGF3-211ENST00000484141 NBPF5PQ86XG9 351 aaPredicted RBP21.92■■□□□ 1.1
PCGF3-211ENST00000484141 LAS1LQ9Y4W2 734 aaKnown RBP21.92■■□□□ 1.1
PCGF3-211ENST00000484141 POTECB2RU33 542 aa21.91■■□□□ 1.1
PCGF3-211ENST00000484141 PDE6BP35913 854 aa21.91■■□□□ 1.1
PCGF3-211ENST00000484141 PDIA6Q15084 440 aa21.91■■□□□ 1.1
PCGF3-211ENST00000484141 ZBTB3Q9H5J0 574 aa21.91■■□□□ 1.1
PCGF3-211ENST00000484141 TIAM2Q8IVF5 1701 aa21.91■■□□□ 1.1
PCGF3-211ENST00000484141 C21orf2O43822 256 aa21.9■■□□□ 1.1
PCGF3-211ENST00000484141 LRP10Q7Z4F1 713 aa21.9■■□□□ 1.1
PCGF3-211ENST00000484141 ZNF652Q9Y2D9 606 aa21.9■■□□□ 1.1
PCGF3-211ENST00000484141 MAP3K15Q6ZN16 1313 aa21.89■■□□□ 1.1
PCGF3-211ENST00000484141 ST5P78524 1137 aa21.89■■□□□ 1.09
PCGF3-211ENST00000484141 LMOD3Q0VAK6 560 aa21.89■■□□□ 1.09
PCGF3-211ENST00000484141 CHL1O00533 1208 aa21.88■■□□□ 1.09
PCGF3-211ENST00000484141 SRGNP10124 158 aa21.88■■□□□ 1.09
PCGF3-211ENST00000484141 GPTP24298 496 aa21.88■■□□□ 1.09
PCGF3-211ENST00000484141 ERFEQ4G0M1 354 aa21.88■■□□□ 1.09
PCGF3-211ENST00000484141 APAF1O14727 1248 aa21.87■■□□□ 1.09
PCGF3-211ENST00000484141 ZEB1P37275 1124 aaPredicted RBP21.87■■□□□ 1.09
PCGF3-211ENST00000484141 NUTM1Q86Y26 1132 aa21.87■■□□□ 1.09
PCGF3-211ENST00000484141 MKRN1Q9UHC7 482 aaKnown RBP21.87■■□□□ 1.09
PCGF3-211ENST00000484141 UBN2Q6ZU65 1347 aa21.86■■□□□ 1.09
PCGF3-211ENST00000484141 CREBZFQ9NS37 354 aa21.86■■□□□ 1.09
PCGF3-211ENST00000484141 ABCC12Q96J65 1359 aa21.86■■□□□ 1.09
PCGF3-211ENST00000484141 FER1L6Q2WGJ9 1857 aa21.86■■□□□ 1.09
PCGF3-211ENST00000484141 ERVV-1B6SEH8 477 aa21.85■■□□□ 1.09
PCGF3-211ENST00000484141 CHADLQ6NUI6 762 aa21.85■■□□□ 1.09
PCGF3-211ENST00000484141 TPTE2Q6XPS3 522 aa21.85■■□□□ 1.09
PCGF3-211ENST00000484141 KIF6Q6ZMV9 814 aa21.85■■□□□ 1.09
PCGF3-211ENST00000484141 BABAM1Q9NWV8 329 aa21.85■■□□□ 1.09
PCGF3-211ENST00000484141 ARFGEF2Q9Y6D5 1785 aa21.84■■□□□ 1.09
PCGF3-211ENST00000484141 SUSD4Q5VX71 490 aa21.84■■□□□ 1.09
PCGF3-211ENST00000484141 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
PCGF3-211ENST00000484141 PRPF40BQ6NWY9 871 aaKnown RBP21.84■■□□□ 1.09
PCGF3-211ENST00000484141 OLFM4Q6UX06 510 aa21.84■■□□□ 1.09
PCGF3-211ENST00000484141 MASTLQ96GX5 879 aa21.84■■□□□ 1.09
PCGF3-211ENST00000484141 SLC51AQ86UW1 340 aa21.83■■□□□ 1.09
PCGF3-211ENST00000484141 PDZRN3Q9UPQ7 1066 aa21.83■■□□□ 1.09
PCGF3-211ENST00000484141 ZNF316A6NFI3 1004 aaPredicted RBP21.82■■□□□ 1.08
PCGF3-211ENST00000484141 RGL2O15211 777 aa21.82■■□□□ 1.08
PCGF3-211ENST00000484141 AIMP1Q12904 312 aaKnown RBP21.82■■□□□ 1.08
PCGF3-211ENST00000484141 ZNF428Q96B54 188 aa21.82■■□□□ 1.08
PCGF3-211ENST00000484141 ERBB4Q15303 1308 aa21.81■■□□□ 1.08
PCGF3-211ENST00000484141 KLRG2A4D1S0 409 aaPredicted RBP21.81■■□□□ 1.08
PCGF3-211ENST00000484141 POTEIP0CG38 1075 aa21.81■■□□□ 1.08
PCGF3-211ENST00000484141 POTEJP0CG39 1038 aa21.81■■□□□ 1.08
PCGF3-211ENST00000484141 GIGYF2Q6Y7W6 1299 aaKnown RBP21.81■■□□□ 1.08
PCGF3-211ENST00000484141 COPS6Q7L5N1 327 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms