RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 SPINK5Q9NQ38 1064 aaPredicted RBP11.08□□□□□ -0.63
CDK5RAP2-216ENST00000483412 TMPOP42166 694 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP2-216ENST00000483412 DISP3Q9P2K9 1392 aa11.08□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GJB2P29033 226 aa11.08□□□□□ -0.64
CDK5RAP2-216ENST00000483412 FSIP1Q8NA03 581 aa11.08□□□□□ -0.64
CDK5RAP2-216ENST00000483412 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
CDK5RAP2-216ENST00000483412 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP2-216ENST00000483412 LIMCH1Q9UPQ0 1083 aa11.08□□□□□ -0.64
CDK5RAP2-216ENST00000483412 FOXO3O43524 673 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 LIG1P18858 919 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 MNAT1P51948 309 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 UHRF1BP1LA0JNW5 1464 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 NOLC1Q14978 699 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 DNAAF4Q8WXU2 420 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 TBC1D32Q96NH3 1257 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GCOM1H8Y6P7 765 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 BIN1O00499 593 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 MYZAPP0CAP1 466 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 PAFAH1B1P43034 410 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CACNA2D4Q7Z3S7 1137 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 ZSWIM4Q9H7M6 989 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 SHANK2Q9UPX8 1470 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 LRPPRCP42704 1394 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 YEATS4O95619 227 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 TBC1D9Q6ZT07 1266 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 PAF1Q8N7H5 531 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 C8orf76Q96K31 380 aa11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 SMC1AQ14683 1233 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP2-216ENST00000483412 KIF1BPQ96EK5 621 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 MAPKBP1O60336 1514 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CCDC171Q6TFL3 1326 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 STX6O43752 255 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 USO1O60763 962 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 RAB11FIP3O75154 756 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 HCLS1P14317 486 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CNNM3Q8NE01 707 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 SSH1Q8WYL5 1049 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 PHF23Q9BUL5 403 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 EMILIN1Q9Y6C2 1016 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 BTBD11A6QL63 1104 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CCDC175P0C221 793 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 UBE4AQ14139 1066 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 TFIP11Q9UBB9 837 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GNAT3A8MTJ3 354 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GLRX3O76003 335 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 MAATS1Q7Z4T9 603 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CCDC150Q8NCX0 1101 aa11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CCDC12Q8WUD4 166 aaPredicted RBP11.06□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GIMAP6Q6P9H5 292 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 UBE2HP62256 183 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 HLTFQ14527 1009 aaKnown RBP eCLIP11.05□□□□□ -0.647e-7■■■□□ 16.1
CDK5RAP2-216ENST00000483412 U3KPZ7 1027 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 RIMS2Q9UQ26 1411 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GOLGA6L9A6NEM1 432 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 IGHDP01880 384 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 NF2P35240 595 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 ZNF165P49910 485 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GNG11P61952 73 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 TSG101Q99816 390 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 THUMPD2Q9BTF0 503 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 MIS18AQ9NYP9 233 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 RSPH14Q9UHP6 348 aa11.05□□□□□ -0.64
CDK5RAP2-216ENST00000483412 ALDH1L2Q3SY69 923 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 ISM2Q6H9L7 571 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 USHBP1Q8N6Y0 703 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CCDC94Q9BW85 323 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 BOLA2Q9H3K6 86 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 SAMD9Q5K651 1589 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 KLHL34Q8N239 644 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 ATP2C2O75185 946 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GIGYF2Q6Y7W6 1299 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 ALS2CR12Q96Q35 445 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GTPBP4Q9BZE4 634 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 IDH1O75874 414 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 SPECC1Q5M775 1068 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 KRI1Q8N9T8 703 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 AIDAQ96BJ3 306 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 GSTTP1A0A1W2PQM5 241 aa11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 TDRD12Q587J7 1177 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 DNMT1P26358 1616 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP2-216ENST00000483412 MCM10Q7L590 875 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 SRRTQ9BXP5 876 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 RALGAPBQ86X10 1494 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 MATR3P43243 847 aaKnown RBP eCLIP11.03□□□□□ -0.642e-6■■■■□ 24.7
CDK5RAP2-216ENST00000483412 CCT2P78371 535 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 NAA15Q9BXJ9 866 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 HSF2BPO75031 334 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 IVLP07476 585 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CEP126Q9P2H0 1117 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 USP5P45974 858 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 KRT28Q7Z3Y7 464 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 MPHOSPH8Q99549 860 aa11.03□□□□□ -0.64
CDK5RAP2-216ENST00000483412 ACEP12821 1306 aa11.02□□□□□ -0.64
CDK5RAP2-216ENST00000483412 DUSP27Q5VZP5 1158 aa11.02□□□□□ -0.65
CDK5RAP2-216ENST00000483412 ZKSCAN5Q9Y2L8 839 aa11.02□□□□□ -0.65
CDK5RAP2-216ENST00000483412 PRAG1Q86YV5 1406 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms