RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 ARXQ96QS3 562 aa19.57■□□□□ 0.72
CCM2-215ENST00000482714 ZNF652Q9Y2D9 606 aa19.57■□□□□ 0.72
CCM2-215ENST00000482714 UBR3Q6ZT12 1888 aa19.57■□□□□ 0.72
CCM2-215ENST00000482714 KIF16BQ96L93 1317 aa19.56■□□□□ 0.72
CCM2-215ENST00000482714 USP42Q9H9J4 1324 aaKnown RBP19.56■□□□□ 0.72
CCM2-215ENST00000482714 CAMTA2O94983 1202 aa19.56■□□□□ 0.72
CCM2-215ENST00000482714 HSP90AB3PQ58FF7 597 aa19.56■□□□□ 0.72
CCM2-215ENST00000482714 R3HDM1Q15032 1099 aaKnown RBP19.55■□□□□ 0.72
CCM2-215ENST00000482714 GIGYF2Q6Y7W6 1299 aaKnown RBP19.55■□□□□ 0.72
CCM2-215ENST00000482714 TTLL7Q6ZT98 887 aa19.55■□□□□ 0.72
CCM2-215ENST00000482714 G2E3Q7L622 706 aa19.55■□□□□ 0.72
CCM2-215ENST00000482714 RIC3Q7Z5B4 369 aa19.55■□□□□ 0.72
CCM2-215ENST00000482714 QSER1Q2KHR3 1735 aa19.55■□□□□ 0.72
CCM2-215ENST00000482714 MSH5O43196 834 aa19.54■□□□□ 0.72
CCM2-215ENST00000482714 FKBP5Q13451 457 aaPredicted RBP19.54■□□□□ 0.72
CCM2-215ENST00000482714 BCAR3O75815 825 aa19.54■□□□□ 0.72
CCM2-215ENST00000482714 USPL1Q5W0Q7 1092 aa19.54■□□□□ 0.72
CCM2-215ENST00000482714 API5Q9BZZ5 524 aaKnown RBP19.54■□□□□ 0.72
CCM2-215ENST00000482714 PI4KAP2A4QPH2 592 aa19.53■□□□□ 0.72
CCM2-215ENST00000482714 GYS1P13807 737 aa19.53■□□□□ 0.72
CCM2-215ENST00000482714 PI4KAP1Q8N8J0 262 aa19.53■□□□□ 0.72
CCM2-215ENST00000482714 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.53■□□□□ 0.72
CCM2-215ENST00000482714 BCL2L13Q9BXK5 485 aa19.53■□□□□ 0.72
CCM2-215ENST00000482714 NOB1Q9ULX3 412 aaKnown RBP19.53■□□□□ 0.72
CCM2-215ENST00000482714 TRIM28Q13263 835 aaKnown RBP19.52■□□□□ 0.72
CCM2-215ENST00000482714 TCIRG1Q13488 830 aa19.52■□□□□ 0.72
CCM2-215ENST00000482714 SMIM5Q71RC9 77 aa19.52■□□□□ 0.72
CCM2-215ENST00000482714 MS4A1P11836 297 aa19.51■□□□□ 0.71
CCM2-215ENST00000482714 ZKSCAN2Q63HK3 967 aa19.51■□□□□ 0.71
CCM2-215ENST00000482714 METTL22Q9BUU2 404 aaPredicted RBP19.51■□□□□ 0.71
CCM2-215ENST00000482714 ZBTB3Q9H5J0 574 aa19.51■□□□□ 0.71
CCM2-215ENST00000482714 BCL2L12Q9HB09 334 aa19.51■□□□□ 0.71
CCM2-215ENST00000482714 TM4SF1P30408 202 aa19.5■□□□□ 0.71
CCM2-215ENST00000482714 NEXNQ0ZGT2 675 aa19.5■□□□□ 0.71
CCM2-215ENST00000482714 HLFQ16534 295 aa19.5■□□□□ 0.71
CCM2-215ENST00000482714 DNAAF4Q8WXU2 420 aa19.5■□□□□ 0.71
CCM2-215ENST00000482714 MTFR1LQ9H019 292 aa19.5■□□□□ 0.71
CCM2-215ENST00000482714 SRP68Q9UHB9 627 aaKnown RBP19.5■□□□□ 0.71
CCM2-215ENST00000482714 MAP3K2Q9Y2U5 619 aa19.5■□□□□ 0.71
CCM2-215ENST00000482714 PARP10Q53GL7 1025 aa19.48■□□□□ 0.71
CCM2-215ENST00000482714 ATF7IPQ6VMQ6 1270 aa19.48■□□□□ 0.71
CCM2-215ENST00000482714 ZNF34Q8IZ26 560 aa19.48■□□□□ 0.71
CCM2-215ENST00000482714 SETDB2Q96T68 719 aa19.48■□□□□ 0.71
CCM2-215ENST00000482714 CENPBP07199 599 aaPredicted RBP19.48■□□□□ 0.71
CCM2-215ENST00000482714 FKBP8Q14318 412 aa19.48■□□□□ 0.71
CCM2-215ENST00000482714 ADCY9O60503 1353 aa19.47■□□□□ 0.71
CCM2-215ENST00000482714 CCDC191Q8NCU4 936 aa19.47■□□□□ 0.71
CCM2-215ENST00000482714 LINS1Q8NG48 757 aa19.47■□□□□ 0.71
CCM2-215ENST00000482714 FRAT1Q92837 279 aaPredicted RBP19.47■□□□□ 0.71
CCM2-215ENST00000482714 ISCA1Q9BUE6 129 aa19.47■□□□□ 0.71
CCM2-215ENST00000482714 PDGFDQ9GZP0 370 aaPredicted RBP19.47■□□□□ 0.71
CCM2-215ENST00000482714 IBTKQ9P2D0 1353 aaPredicted RBP19.46■□□□□ 0.71
CCM2-215ENST00000482714 ATP10DQ9P241 1426 aa19.46■□□□□ 0.71
CCM2-215ENST00000482714 NIP7Q9Y221 180 aaKnown RBP eCLIP19.46■□□□□ 0.71
CCM2-215ENST00000482714 TUBGCP6Q96RT7 1819 aa19.45■□□□□ 0.7
CCM2-215ENST00000482714 CCT4P50991 539 aaKnown RBP19.45■□□□□ 0.7
CCM2-215ENST00000482714 NFIXQ14938 502 aa19.45■□□□□ 0.7
CCM2-215ENST00000482714 TBC1D9BQ66K14 1250 aa19.45■□□□□ 0.7
CCM2-215ENST00000482714 ALDH1L1O75891 902 aa19.44■□□□□ 0.7
CCM2-215ENST00000482714 PDE3AQ14432 1141 aa19.44■□□□□ 0.7
CCM2-215ENST00000482714 BEND3Q5T5X7 828 aa19.44■□□□□ 0.7
CCM2-215ENST00000482714 TPTE2Q6XPS3 522 aa19.44■□□□□ 0.7
CCM2-215ENST00000482714 PPP1R42Q7Z4L9 355 aa19.44■□□□□ 0.7
CCM2-215ENST00000482714 F6X3S4 739 aa19.43■□□□□ 0.7
CCM2-215ENST00000482714 TRIM27P14373 513 aa19.43■□□□□ 0.7
CCM2-215ENST00000482714 POLD1P28340 1107 aa19.43■□□□□ 0.7
CCM2-215ENST00000482714 MYD88Q99836 296 aa19.43■□□□□ 0.7
CCM2-215ENST00000482714 SRCIN1Q9C0H9 1055 aa19.43■□□□□ 0.7
CCM2-215ENST00000482714 NYXQ9GZU5 481 aa19.43■□□□□ 0.7
CCM2-215ENST00000482714 RNF123Q5XPI4 1314 aa19.43■□□□□ 0.7
CCM2-215ENST00000482714 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
CCM2-215ENST00000482714 NLRP10Q86W26 655 aa19.42■□□□□ 0.7
CCM2-215ENST00000482714 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
CCM2-215ENST00000482714 SPON1Q9HCB6 807 aa19.42■□□□□ 0.7
CCM2-215ENST00000482714 PARP3Q9Y6F1 533 aa19.42■□□□□ 0.7
CCM2-215ENST00000482714 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
CCM2-215ENST00000482714 ZBTB7AO95365 584 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 SLC4A10Q6U841 1118 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 CWC25Q9NXE8 425 aaPredicted RBP19.41■□□□□ 0.7
CCM2-215ENST00000482714 NUP98P52948 1817 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 NEURL1BA8MQ27 555 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 SERPINB2P05120 415 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 IGKV5-2P06315 115 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 MMP10P09238 476 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 HSP90B1P14625 803 aaKnown RBP19.41■□□□□ 0.7
CCM2-215ENST00000482714 UTP14AQ9BVJ6 771 aaKnown RBP19.41■□□□□ 0.7
CCM2-215ENST00000482714 ABCC4O15439 1325 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 CARMIL3Q8ND23 1372 aa19.41■□□□□ 0.7
CCM2-215ENST00000482714 ATP5J2-PTCD1G3V325 749 aa19.4■□□□□ 0.7
CCM2-215ENST00000482714 POLRMTO00411 1230 aaKnown RBP19.4■□□□□ 0.7
CCM2-215ENST00000482714 GPTP24298 496 aa19.4■□□□□ 0.7
CCM2-215ENST00000482714 BCORQ6W2J9 1755 aa19.4■□□□□ 0.7
CCM2-215ENST00000482714 BICDL1Q6ZP65 573 aa19.4■□□□□ 0.7
CCM2-215ENST00000482714 CASZ1Q86V15 1759 aa19.4■□□□□ 0.7
CCM2-215ENST00000482714 FTSJ3Q8IY81 847 aaKnown RBP19.4■□□□□ 0.7
CCM2-215ENST00000482714 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
CCM2-215ENST00000482714 SCN7AQ01118 1682 aa19.39■□□□□ 0.69
CCM2-215ENST00000482714 PXDNLA1KZ92 1463 aa19.39■□□□□ 0.69
CCM2-215ENST00000482714 GCKRQ14397 625 aa19.39■□□□□ 0.69
CCM2-215ENST00000482714 SUSD4Q5VX71 490 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms