RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 ZBTB3Q9H5J0 574 aa26.28■■□□□ 1.8
CTSA-206ENST00000480961 PARP3Q9Y6F1 533 aa26.28■■□□□ 1.8
CTSA-206ENST00000480961 SLFN5Q08AF3 891 aa26.27■■□□□ 1.8
CTSA-206ENST00000480961 KIF6Q6ZMV9 814 aa26.27■■□□□ 1.8
CTSA-206ENST00000480961 COPS6Q7L5N1 327 aa26.27■■□□□ 1.8
CTSA-206ENST00000480961 DBF4Q9UBU7 674 aaPredicted RBP26.27■■□□□ 1.8
CTSA-206ENST00000480961 E9PSI1 815 aa26.26■■□□□ 1.79
CTSA-206ENST00000480961 MAP3K15Q6ZN16 1313 aa26.24■■□□□ 1.79
CTSA-206ENST00000480961 POLRMTO00411 1230 aaKnown RBP26.24■■□□□ 1.79
CTSA-206ENST00000480961 VAMP4O75379 141 aa26.24■■□□□ 1.79
CTSA-206ENST00000480961 CCDC30Q5VVM6 783 aa26.24■■□□□ 1.79
CTSA-206ENST00000480961 SYT17Q9BSW7 474 aa26.24■■□□□ 1.79
CTSA-206ENST00000480961 PHAXQ9H814 394 aaKnown RBP26.22■■□□□ 1.79
CTSA-206ENST00000480961 HYPKQ9NX55 129 aa26.22■■□□□ 1.79
CTSA-206ENST00000480961 ZNF652Q9Y2D9 606 aa26.22■■□□□ 1.79
CTSA-206ENST00000480961 ERVV-1B6SEH8 477 aa26.21■■□□□ 1.79
CTSA-206ENST00000480961 SERPINB2P05120 415 aa26.21■■□□□ 1.79
CTSA-206ENST00000480961 NLGN2Q8NFZ4 835 aa26.21■■□□□ 1.79
CTSA-206ENST00000480961 SETDB2Q96T68 719 aa26.21■■□□□ 1.79
CTSA-206ENST00000480961 COL24A1Q17RW2 1714 aa26.21■■□□□ 1.79
CTSA-206ENST00000480961 CLEC4GQ6UXB4 293 aa26.2■■□□□ 1.78
CTSA-206ENST00000480961 FAM177BA6PVY3 158 aa26.19■■□□□ 1.78
CTSA-206ENST00000480961 CCDC24Q8N4L8 307 aa26.19■■□□□ 1.78
CTSA-206ENST00000480961 NIP7Q9Y221 180 aaKnown RBP eCLIP26.19■■□□□ 1.78
CTSA-206ENST00000480961 SLC4A2P04920 1241 aa26.18■■□□□ 1.78
CTSA-206ENST00000480961 GPTP24298 496 aa26.18■■□□□ 1.78
CTSA-206ENST00000480961 TRMT2AQ8IZ69 625 aaKnown RBP26.18■■□□□ 1.78
CTSA-206ENST00000480961 STK31Q9BXU1 1019 aa26.18■■□□□ 1.78
CTSA-206ENST00000480961 CHMP4AQ9BY43 222 aa26.18■■□□□ 1.78
CTSA-206ENST00000480961 G2E3Q7L622 706 aa26.17■■□□□ 1.78
CTSA-206ENST00000480961 CD2APQ9Y5K6 639 aa26.17■■□□□ 1.78
CTSA-206ENST00000480961 GIGYF2Q6Y7W6 1299 aaKnown RBP26.16■■□□□ 1.78
CTSA-206ENST00000480961 ANKRD13DQ6ZTN6 518 aa26.16■■□□□ 1.78
CTSA-206ENST00000480961 SCN7AQ01118 1682 aa26.15■■□□□ 1.78
CTSA-206ENST00000480961 ZNF428Q96B54 188 aa26.15■■□□□ 1.78
CTSA-206ENST00000480961 CARMIL3Q8ND23 1372 aa26.14■■□□□ 1.78
CTSA-206ENST00000480961 RGL2O15211 777 aa26.13■■□□□ 1.77
CTSA-206ENST00000480961 NBPF5PQ86XG9 351 aaPredicted RBP26.13■■□□□ 1.77
CTSA-206ENST00000480961 PLBD2Q8NHP8 589 aa26.13■■□□□ 1.77
CTSA-206ENST00000480961 WWC3Q9ULE0 1092 aa26.13■■□□□ 1.77
CTSA-206ENST00000480961 NPHP1O15259 732 aa26.12■■□□□ 1.77
CTSA-206ENST00000480961 PRR5LQ6MZQ0 368 aa26.12■■□□□ 1.77
CTSA-206ENST00000480961 RIC3Q7Z5B4 369 aa26.12■■□□□ 1.77
CTSA-206ENST00000480961 ZNF34Q8IZ26 560 aa26.12■■□□□ 1.77
CTSA-206ENST00000480961 A0A0G2JLW4 131 aa26.11■■□□□ 1.77
CTSA-206ENST00000480961 C10orf71Q711Q0 1435 aa26.11■■□□□ 1.77
CTSA-206ENST00000480961 UBN2Q6ZU65 1347 aa26.11■■□□□ 1.77
CTSA-206ENST00000480961 BCORQ6W2J9 1755 aa26.1■■□□□ 1.77
CTSA-206ENST00000480961 TCIRG1Q13488 830 aa26.1■■□□□ 1.77
CTSA-206ENST00000480961 CNBD1Q8NA66 436 aa26.1■■□□□ 1.77
CTSA-206ENST00000480961 ATP5J2-PTCD1G3V325 749 aa26.09■■□□□ 1.77
CTSA-206ENST00000480961 SUSD4Q5VX71 490 aa26.09■■□□□ 1.77
CTSA-206ENST00000480961 ZBED9Q6R2W3 1325 aa26.09■■□□□ 1.77
CTSA-206ENST00000480961 ATP10DQ9P241 1426 aa26.08■■□□□ 1.77
CTSA-206ENST00000480961 DPEP1P16444 411 aa26.08■■□□□ 1.77
CTSA-206ENST00000480961 CHRNA5P30532 468 aa26.08■■□□□ 1.77
CTSA-206ENST00000480961 FLIIQ13045 1269 aa26.08■■□□□ 1.77
CTSA-206ENST00000480961 PELP1Q8IZL8 1130 aaKnown RBP26.08■■□□□ 1.77
CTSA-206ENST00000480961 HSP90AB3PQ58FF7 597 aa26.07■■□□□ 1.76
CTSA-206ENST00000480961 TPTE2Q6XPS3 522 aa26.07■■□□□ 1.76
CTSA-206ENST00000480961 NUTM1Q86Y26 1132 aa26.07■■□□□ 1.76
CTSA-206ENST00000480961 GOLGB1Q14789 3259 aaKnown RBP26.06■■□□□ 1.76
CTSA-206ENST00000480961 PI4KAP2A4QPH2 592 aa26.06■■□□□ 1.76
CTSA-206ENST00000480961 DDX58O95786 925 aaKnown RBP26.06■■□□□ 1.76
CTSA-206ENST00000480961 GTF2E1P29083 439 aaPredicted RBP26.06■■□□□ 1.76
CTSA-206ENST00000480961 PI4KAP1Q8N8J0 262 aa26.06■■□□□ 1.76
CTSA-206ENST00000480961 MYD88Q99836 296 aa26.06■■□□□ 1.76
CTSA-206ENST00000480961 BCL2L13Q9BXK5 485 aa26.06■■□□□ 1.76
CTSA-206ENST00000480961 MAP3K2Q9Y2U5 619 aa26.06■■□□□ 1.76
CTSA-206ENST00000480961 TGFB2P61812 414 aa26.05■■□□□ 1.76
CTSA-206ENST00000480961 ST5P78524 1137 aa26.05■■□□□ 1.76
CTSA-206ENST00000480961 KSR2Q6VAB6 950 aa26.05■■□□□ 1.76
CTSA-206ENST00000480961 NLRP10Q86W26 655 aa26.05■■□□□ 1.76
CTSA-206ENST00000480961 SSH1Q8WYL5 1049 aa26.05■■□□□ 1.76
CTSA-206ENST00000480961 FKBP5Q13451 457 aaPredicted RBP26.04■■□□□ 1.76
CTSA-206ENST00000480961 ERFEQ4G0M1 354 aa26.04■■□□□ 1.76
CTSA-206ENST00000480961 PARP10Q53GL7 1025 aa26.03■■□□□ 1.76
CTSA-206ENST00000480961 MRPL50Q8N5N7 158 aaKnown RBP26.03■■□□□ 1.76
CTSA-206ENST00000480961 ISCA1Q9BUE6 129 aa26.03■■□□□ 1.76
CTSA-206ENST00000480961 BRIP1Q9BX63 1249 aa26.03■■□□□ 1.76
CTSA-206ENST00000480961 ADCY9O60503 1353 aa26.03■■□□□ 1.76
CTSA-206ENST00000480961 PXDNLA1KZ92 1463 aa26.03■■□□□ 1.76
CTSA-206ENST00000480961 NTSR2O95665 410 aa26.02■■□□□ 1.76
CTSA-206ENST00000480961 KCNA3P22001 575 aa26.02■■□□□ 1.76
CTSA-206ENST00000480961 C2CD5Q86YS7 1000 aa26.02■■□□□ 1.76
CTSA-206ENST00000480961 SYNE4Q8N205 404 aa26.02■■□□□ 1.76
CTSA-206ENST00000480961 METTL22Q9BUU2 404 aaPredicted RBP26.02■■□□□ 1.76
CTSA-206ENST00000480961 UTP14AQ9BVJ6 771 aaKnown RBP26.02■■□□□ 1.76
CTSA-206ENST00000480961 NYXQ9GZU5 481 aa26.02■■□□□ 1.76
CTSA-206ENST00000480961 GPR162Q16538 588 aa26.01■■□□□ 1.75
CTSA-206ENST00000480961 PPP1R42Q7Z4L9 355 aa26.01■■□□□ 1.75
CTSA-206ENST00000480961 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
CTSA-206ENST00000480961 TRMT112Q9UI30 125 aaKnown RBP26■■□□□ 1.75
CTSA-206ENST00000480961 ABCC12Q96J65 1359 aa25.99■■□□□ 1.75
CTSA-206ENST00000480961 F6X3S4 739 aa25.99■■□□□ 1.75
CTSA-206ENST00000480961 RTL5Q5HYW3 569 aaPredicted RBP25.99■■□□□ 1.75
CTSA-206ENST00000480961 SMC4Q9NTJ3 1288 aa25.99■■□□□ 1.75
CTSA-206ENST00000480961 NUP98P52948 1817 aa25.99■■□□□ 1.75
CTSA-206ENST00000480961 AFDNP55196 1824 aaKnown RBP25.99■■□□□ 1.75
CTSA-206ENST00000480961 NRXN2Q9P2S2 1712 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms